Contig Data
morexGenes
Links



Map Locations of contig_7041 (5763 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_7041

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76174 1 959 bp MLOC_76174.1 Available Available LOC_Os02g26850.1, FRAME:+3, EVALUE:2e-99, 13102.m02919 protein rRNA-processing protein FCF, putative, expressed





CDS Structure of MLOC_76174






Contig Sequence (5763 bp)

>contig_7041 5763 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGTTAGCAGGACTTCTCGAATGTCTATTATAATAAGGTTTGCTC
CACTTCAGTGAGGAAGGGGCGATCACTAGAGCGCGCCTTCGACTCATTCTAGTGATTATA
ATCGTTATTAGGTGGTCTACGGACCTGAATGTAGTTCTTACTCGTGGTTTTCTTTGTGCT
GCTTTTTAGCATGTTCTTTGTATTACCTCAACGGTTGATGAACCCTCCATTCCTAGATAT
AACTTTTCTTAGAGATTTCAATCCTCTATAACAATAAGCTTCCTACTTTTAAAAAGCCCC
CATTCAACTGAGATTGAATGGATCACCCAGTTTTAACCGGGTTAACAATTTCTCAAAGCT
CTCTCATTCATTCTTTTTAAATTATATATTATGCTTCATATTTTTAAGACCACACAACTA
ATTGACATATAATTTAGAACCGGGTCATCCAATTTCGACCAAGTCAACAGTATCTCAAGC
TCTTCCATTCAATTATGTTAATTCATTATGTTCCCTAATTTTGCAGCTCTTTCTTTCAAT
TGAGGTATTTGATTTTTGGATTGGTTTACGATCTTGACTGGGCCAATGATTTTTGTTAAA
TCAATCAACAACAACCGACCTATAAAAACATATCAATCATGTGCATTCTCCCACCAGCTA
GAAAAAAATAAGCACCATCATATGATATTGTTGAATCGATTACATGCAACCACCGATACA
GATTTTTTTTTCCGTATATAATATAGGCTGGTTAGCGCATAATACATTTTTTTTGTATAT
AATATAGGCTGGTTAGCGCATAATACATTTTTTTCGTATATAATATAGGCTGGTTAGCGC
ATAATACAGAATCACGCCATGAAAGACCCACCAAATCACCCATTATAAATTAAAATAAAC
CACACTCTATCATCTCCCCCGTGTGTCAAACTAAATATTACATCCATTCCAAAATATAAG
TGGTATAGAAAATCAAATTTATTTAACTTTGAGCAAGTTCATGGCAAAAATATTGACACC
CACAATGTTAAACAAAAAGATATGGAAATAAATTGCATGATGAATCTAAAAATGCCGATT
TGACATATTTCTTTATAAATTTGATCAAACTTAAAAGGTTTGACTCTTCAAAAAAGTAAT
ACATCTCATATATTGAACCAGAATGATTTTTTTTATGAAACACAACAACATCATCGACGC
AACAAAGCGCACCCAACCATTTTAGTATGCACTACGTATGGAGCAAAATTAGGAGAGCAG
TAGCTAGGAAGCACGGGCAATTTCTTTCTTTTTTGAGAATGACGAACACATGCCGCAGTA
CAGGGCGCCCACAAGACTCAGTCCGGACGGCCCGCAGCAGCCCATCACGAACGCACGCGG
CGAACACGAAACCCTCCTAAGCCCTCGCCGCACGCGATGAGGGTGAAGAGGCGGTCGCGG
CACCGCAAGGTGGTCAAGTTCTATTCCACCTGCTTCGGCTTCCGCGAGCCCCACAAGGTG
CTCGTCCACGGCCTGCTCCCCGCCGACGACGCCCTCCGCGAGCTCCTCTCCGCCACCCGG
CCGCCCCCGCTCTTCACCTCCAAGTGCGTCCAGGCCCAGCTCCGCCGCCTCGGCAAGTCC
CACTCCCAGGCATTCGACGCCGCCCAGCTCCTCGCCACCGACAGGTCCCCTTCGATCCTC
CTGCTTTTATTTATTTTTATTTACGGGCTACAAAACTGTATGAAGTTGCGTTGGTATTTG
ATGCGATTTTGAATACGAATCATTTTGTTCTGTCGTATTAATTAGTCACCTGACTGATAG
AGTCAATTTGGGTTCGGGCTATCTGAATGTACAGTATAAAACTTCTTTGCCAACTATGAA
ATCGTATAGTGGATTTTGGATCAAGTTGGTTTTGTTTAATCACTTTGATTGTATGAATCT
CTGGTACGACATTCAGTGAGAATAGTTTTACTGTATTTGACTTATGAGTTTGAGCAACTG
ATGATTGTTTGTTCAATTGACTTGTTGGTGTTTCCAGTTGCGAGCATGAAAAAGTGGTCA
GTGCAGTTGATTGTATTCTCTCACTGGTAGGTGATAAGAATCCGCAACACTACTTTGTCG
CTACCCAGGATTCTGGTCTCCGGGCTAAGCTACGGGAGGTATGAAGATCCGCTGGACAGA
TCTACTAGCATTCTAATTTTACCATGTTATATTCTGATTTTTTTGTGTGAAAGAATCTGC
TCAGGGTCAGTAATACGGCCTGCAAGTGTCATAGTATCTACTTCAAAACTAGCAAAATGT
ATTATGACATATTAAAAAATGCTTCTGCTGCAATGTGATCATGTCTGTTTTTATTGGTTG
TAGGTTCCTTGTGTTCCTGTGATATACGGTGTGAAGAACTCCCTGGTTATTGAGCAACCA
TCCGTGCAGCAACGCAAGTTTGCTCAGCTGGATGAGGAGAAGCGTATTCACATGGAAAAA
TCAGAATTTAAGAAGCGACTAAAAGCATCATCAGAAGGAAAGACGTCTGTTGATGGAAAC
ATACCCGGAGTAGTTGCAGAGAAAAGCAAGTTTAAAAGGAACAGAGCAAAGGTTATATTT
AAATTTACTGTTTTCAGTATATTTGTCCTATGCACATGTATATTGACCGTTACGATATAG
TGAGCATCATTAACACTTTGAAATATGAAATGCTGATGTGTGTCCTTCTGCAGGGTCCGA
ACCCATTATCCCGCAAGAAAAAGAAACCAAAGCCCCAACCATCAGCTGCTCAAAATCAGG
TAATCATCGCTACACACCATTATCAGTTGACATATGTGAGGTATATATAATCGGTTAAGG
AACACGCTCGCATAAGTATCGGTTACAATTAATGCTGCAAAAACAAGCCTGGAGTTGCCT
GATACACTAACTAAGAGTAAGACGGATGAGAAATAATGCGACAATTAAAGCTTAGATAGG
CTCTTAGACAGTGAAACCCCTACAGATTCGTTATTGCTGTAGCCCCTATTTCATTTGTAT
TGGGATGTGGATGGCTCCTGCAAGGTGAGGCCCATTGCATATATATCCGCCTGTGCTGTA
GCTCCTGATTTCAGTTCTATTGGGATGTGGGTGATACACACATATCTGATGACAACAAGC
ACTTATGAGAACTTGTTTCCTTCAGGGTCTGAGGGCCGATGGTGAGGCAAAGCGAAAAAG
GGTTAGGAAGCGGAAGAGAAGCGGCAAAGATAGCATTCAAGCAGAGACAGCGAGCTGATG
GGCCTAGAAAAAAGTTGCAAAACAATGGTGTCATTTTGCTGCTCTGGCCCCAATCCGCCG
CATCAAATGCTAAGATTATGTGCTGATGGTGTTTTTTCAAATGTGGTACACAATCCTCAG
TCAAGTTGATAGATCATACATCGTCACAATAGGATCGTAACTGGAAACTTTTGGCAGTGT
AGCACTAATAGTTTGTTTGAGACGGTTTGGACTTGTAAAATTTGTCCTTGCTGGTAATCT
AGTATATGAATACATCCAAAGTTTTGGCGTTGTATCATGAAGAAATCAACCGTCTGATTC
CTGCAAACTTGTGGATCGGTTCATCTTTCAGGTCTCTTCCTTGCCGTACAAGTGGATTGG
TACAATTGCAACGTAATTGTACAGTTGCGCTAAGCCGGCATGATCGAAATATGTCATTTC
TTTGCAAAAAGTAGAGATTTTGTTTTAAATATTGTATGTAGTTAAATGAAACCATTCATA
ATAGAAAATGGCATGGATTGGCTTAGACGAGCCATCAAGGTCTAAACACTGTTACACGCA
TTGTTTACACTGGTACAAGCACACTGTAACTCTTAACAACAAATAAAGGTCTAATCACAG
CAGCACACACACACAAGATTCCTTTAAAGTTCCTCAACACACACACTTGTGATGATAGCA
GATCCAAATTCTCCGACTGGTAGTGTGAGAACAGCAGCACCTACAAACGATGGTAAATGA
TCCATGTATGCAATATACGCGTGTTTGGCCCTCTTCAAGCAAATGGCGTCAGTGGTTGTG
CTGGTGGTTCCGCTTTGCCACCGGTGTGAGTCATCAGGACAAAAGAAAGGGCGAACATCA
GAGATAGAACAAGTATGCCCAGATATGCGGTTGGTGGAGACGGGCATGCCACTATCCCAT
AGCATATCCCTTTTCTCTTACAGACTGCTACGAACAGAGCATTTTCGTTATAGCCCCTTT
GCCAAAGGTGATATATGGATACGATAGCAAAGCTGACAAGTACTGCACTAACATACACAG
GAGCAATTGAAGCTAACACCGCACCTGTACCAAATATAAAGGCGACGATCATGCTTGCCA
CTGATAAAATTATGAAACCGAGGGAGCTTTCAAATAGCAGCTTTCTTCTCGGAAGGCATA
CCGTGGGATCTCCAGAAAACATGAGAGAAATTACAGCCGTGGCTGAGAGAGCGAAGGCAA
GTGCGTTGGCCAAGATGAATACATCAAAAGTAGGTGTTCCAGCAAGAGTTGGGGAGCCCG
CATTAGGGTGACCATCACCTCTATAACCCCCAGGCATTGCAAACATTGCACCAAACGTCA
CGGTTGCAATTAGGACAGCGACAATACATCGACTTTGCGTCCCCTCTTTCACTTGATTCA
CTGTATGTATTTCATCCTGTCTTGCTTTGTCAATGTCATATTCATTCAAGAAACCCTGGT
GAAAAATACCCCTTTCAGTACGGACAGACTTGAGTGCCTTGATGATTTTTTCTTCATTTA
CCTGCAAAATCAGAATAAATAAATAAGAAACCATCACATCTCAGTTGTTTTTGTTCACGT
CCAAGGCCGTGCTATAAAATTAAAATGATCTGATATATATACTACCATGTTCATCTGTAA
ACCTTCAGCAAGATTGTGATGCGCCATTCCTAGCGGAGTCATCCCTTTCTCATTTGTTAT
ATTCAACTGTACTTGTCTATTCCCAAACAAAGAACAAAACATTCTCAGACTACCTTTCCT
TATAGCAAGGTGCAGTGCAGTGTTCCCATCTTTGTCTTGCATATTCAAAATCCATGACAG
CGATATGTTTCGACAAGCATAATCGACTGTCCTTGTATTCATCCTGTCAACTGCAACATG
GAGAAATGTCCTTCCCCTAGCATCAAGCAAACCAGCGCAATTGGGTGACTTCATAAGGAA
ATCATCGATGACCCATGTTGCACCGGTTGATGCAGCCATGTGTGTGGGAAATGATCCACT
GTGGTCCGGTTGATACAATGCGTCTGGATTGGCTTTCAATAATTGTGAACACATGGCTTG
GTTGTCTCTTTTTATTTGAGGCAGAGTGGCTAGAACCGCAAAATGAAGCAGTATGCTCCC
GTTTGCATCCCCTTGCAGCGTAAGGTCATTGTTCCATTCTAACAACATCTTCGTAAGATC
TGCGAGTAGCACCATAAGTATGAGAGATGGAAATGGAACTATGAAAATGATGCTAAATCA
AATGTGTATACATGCATCATTATAACAAGTCAAGGTGATGTGCACTCGGCGGTTAGTGAC
ATCACTACAGAAAAATGATTGCACGCCGAGTCTATGGGTAAATATGCACTCGTTAGGTTG
GTTGCAATGAGAAGAAACTTTAGACTGGTATCATGTACATGGAGTGGGCATGTCTTGAAC
GCATGGGCATCTGTACCCACTTAAAAAAAAAGCATTTTAAGCATGTTTGAAAATGTAAAA
CATTCAAAGAAATTTGTTACATATATATGTTTAGAAGTTGAGAGTGGATTTTTAGCTCCC
GGG