Contig Data
morexGenes
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Map Locations of contig_7027 (3142 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_7027

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76142 1 1562 bp MLOC_76142.1 Available Available LOC_Os05g32600.1, FRAME:-2, EVALUE:4e-141, 13105.m03360 protein cyclin-dependent kinase D-1, putative, expressed
MLOC_76141 1 372 bp MLOC_76141.1 Not available Available None





CDS Structure of MLOC_76142






CDS Structure of MLOC_76141






Contig Sequence (3142 bp)

>contig_7027 3142 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCTACAACCTCCGTAGCCAACGTTGGCTACAACAACAAGGCATCATTTA
TACACAAGAGACTGGGAAGGCGAAGAAGAGAAGTGATGCATTTTTTTCTGTCAAGCTTGA
GAAACCAAACTCAACATGTTCATTTTAGGTTTTGCTTTCACCAATTCCAGGCAAAAAAGA
AAGCACAATTCAAGGGAATAACTAAATCTGGTAAAGCAGGCCTAGTACCAACCACAACCA
TATCCCAGGAACCTAGCCGTTGACCTAGCCAAGAGAAAGATTTATATGTAAACCAGCCCC
ACTGATTACCAAAATAACAATAATGTGAAGTTGTACATATTTGTGTGAACAAGAAAACAG
GTACCAAAATACGAACCGAGCTTACTTCATTTGAACCTTTATTTATAACTGCTATATTTC
AGATCTTTTAAATTTTAACACATCAGGCATAAATGCTTGCACGCTGTGGCTAGGAGCAAT
TAGCTCCCTGTTCACACAATCTACAGTCAAATGTTTGAATCCTCCAAAAAGAAATTAAGT
CATACATTTTTTTACATTAAATTAAGTCATACATTTTTTTCACATTAAATAAAGTCATAC
ATGAAAGCAGTTTGTCCAGTTAATCCATTAGCGGATTCAAAGTGGTCTTTCTGGGATAAC
ACAAGAACCCCACAGGAGCAGACCAATTTCAAGTTTTTCCCAGTCATACTTACAGTCCAG
TCGAGCTTTCAAAACGATGTTTTGAGTTGTGACGTAAAAACTGTTTCACCCATGCAGTTA
TCACATCATCAATGAACAGTGTACTTAGCCATACACATGTTACATTCAAGAGTCACAGAT
AACATATCTTAACCAGACCTAGATTAAAATTATAAATATATTGACCATATTGAGAAAACT
GAGAGGCTGCTAAACCTGGAGAAATGGTCGTCTAAGCAGCAACTCGGCAAAAATACAACC
AGCAGCCCAAACATCAACGGCAGATCCATACTGCTTAGTGCCAAACAGTAACTCCGGCGC
TCGATACCATCGTGCAAAGACCTAAATGTGGTGAAAAAAAACAGTCAAGTTTCAAGTGCC
CATCAGGAGCATGTAAATCAAACGGAAGATAAAGTACAAATTAATCATATTGCAGTAAAC
CACACTATGAAATAAGCTTAGAGATGGTACTTGCCTAGGTGATGTTTAATGTTTATACTG
AATAAAAGTGATGGACTAAGAGCTCTTCCAGATATGATGTAACTTCTATGCTGAGAGGAT
CTAATGTAACTTGCAAGAACAAAAATCCACAGCAAGCATAAAACATTTACAATAGTTAAC
GTCCTTTTTCTAATCAGCATCGGCGAGTTTGAAGGAAGCATCCTTGTTGAATCGATATTT
TTTAGCACTTATTATCATTACATCACGCCTATGTTGACATCACCAACATCGACGGTCCCA
AGCCTGGGTAAAGGAGGAGGGTTGTGATAGGCTTGGCGAGCTAACGTCAAAACTCAGCCA
CTCTTATGGAGATGAAACCCAGAAGAAGATTGTTGTTGACATCACCAACGAATTAACAAA
TAGCAATCCAAAACCTCATATAGGAAGCAAATATCCTCAGAATAGCGTAAAATATTGTAT
ATGTTTGTTCTCTCCAGAAAGCTTTTCCATCCTAGAATAGTCAGCAGCACCAAGAATACT
TCAAGCTGGTTTAAGATATTTTATCTTTTAAACTTAACAGGCAATTGCTACCACGAGGAG
ATATAATCCACAGACAAATTTATCTACCTACCAAAGTGCTATGGTACTCCAACTTAATAT
TGTTACTGTGAATAATTGTACGATTGATAAATACTGGCAAGCATGTATCATGTTCTTAAT
GGATACGAAGAAAATTAGAAGCATCAACCAGCATTATACAGACAGCCTAGAGGCATATAC
AGCATAAGAAGTAATAATACCACTTGAAGAAAGTTGTCAGATTACATTTTTATTTCTATA
ACCAGTTTCTGGGATTTCTGAGAGTCTGGGACACAATTAACTGAACGCATATTTAAATAG
ATATATCAACAAGAACCTGGTGGGTAAAGTTCCGTTCTGGGCTCCCGAATATGCGTGCAA
GACCAAAGTCACCAAGCTTGAGCTGTCCTTCAGCACCGATAAGTAGATTATTTGGTTTCA
TATCCCTGCAGCACAGCTTCTGTTAAAGACTCGAATGTTGTTTTCTCAAAAATAAAAATA
GCCAGATAGTAGGTACCTGTGCAACACCCATTTCTTATGGCAAAAGGCTAGACCTTTCAG
CATCATCTGAATATAAGATTTTATGTCCGCTGGAGATAATACAATGTTCCTGTCACGAAT
GACTGCTTCCAGGTCTGTTTCCATAAATTCAAATACAAGGTGCAAGTTTCCCTTGTAAGG
GAAAGCATCAATTAGCTCTATAATATTAGGATCTTTCAGCTCCTTAAGCAGCTTGATTTC
CCTCAATGCAGTGAAGTTGACACCTTCCTTGTACTTCCCTAAGCGGATTCTCTTGATCGC
AACAGTCTCCCCAGTCTGAAAATAAAAGCCATGGCATTCATAATCATTAGCTTAAATGGA
CTGAAGTATCATCAAAAGCAGAAAGCAACCTATCAGACTCAAACCCAGAGAGCTGAAAGA
GTTAACTTGGGAATACTGAACACCTCTGGAATGAAATTTTAACACCTCAGACCCCTAGCC
CTACTATCACAGAGATGCAAGACTATTAAGCACCAAATCAACGCTGACAGTGAAGGAGGC
AAGGTGAATTGCCTTCTCCTCTAGCCTCCGCTGAGAAACAACCCTAGCCGATTCACGCCG
AGCCAAGAACATCCAGCTAGGCCAATTCACAGAGCAGCCGCGGCCAAAAGCAATAAACCC
TAAGCTCAATCGCTCGACAACCTATATCCAACACAAAGCAGACGGACGGACCAAGGGCGC
ATATGGCCTAATTCTCGAGGGGCGGGCGCAGATCAGCGCGCCGCGAGGGTTTAGGAGCGG
GGGTAGGGGGAGGGAAGGACCGACCTTGGTGTCGATGGCCTTGAAGACGACTCCGTACGT
GCCCTCTCCGAGGACCTCGCGCTTCAGGTAGCGGTCCGTGACGCGCTTCTCGCCCGCGTC
GTCGCCGCCGCCGCCGGTCGCC