Contig Data
morexGenes
Links



Map Locations of contig_70181 (5198 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_70181

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76116 1 821 bp None Available Available None
MLOC_76117 5 2680 bp None Available Available None
MLOC_76118 1 208 bp MLOC_76118.1 Available Available None
MLOC_76119 2 543 bp None Available Available None





CDS Structure of MLOC_76116






CDS Structure of MLOC_76117






CDS Structure of MLOC_76118






CDS Structure of MLOC_76119






Contig Sequence (5198 bp)

>contig_70181 5198 assembly3_WGSMorex_rbca.fasta
TATGTGTGGAATATTGCTCCGACGAGCCCGTGTAATCGAACCACTACTATCTATGTTGCT
CTATGTTTGCTAAAATGGATCTATGTTGTTTGAATTCGGTCGATTTGCTTTTAAATGCTT
GTAAATTTGCTTTTCTGAATCGGAGCTCACCGGCGTTGCCGTGCTTCATTGTTAGAGAAG
AAGAAGAGGGAGGATGCACGCGCAGGGGAAAACTGTTTTACCGTAGTCGCCGCCATCTGG
GTCCCATGCCGACGTGGATAAACTGTGGGTCCCGCGTGGCTCCACCTAATCCTGATAGAT
ATTGTGCTTAAGGGCTATGTCACGCCTGGGCTATTTGTACGCACAGAGATGTCACAGCAG
AGCCATTCTTGCAAACAATGCCGGTTTACACTCAGTTCGTATCAAAAACATCGCACAGGA
GCTATGGACCCATGTCTCTAGGCCTCATATTTATCTCCTCGATTACTTCCTCTTGAGGGA
AGGGAGAGTCAATCATCTAGGTCATGTGACTCAAGGTTTAGTTCCTCCCAATTGATGTCC
TTTGTGCTCACGCTTCCCCCTTTCATTATACTAGATGACCCGAGGTTTAGTTCCTCCCAA
TTGATGTCCTTTGTGCTCGCGCTTCCCCCTTTCATTATACTAGATGACCCGTTGCGCCGA
TGGCGCAAAGGCCGAGAGCGAACCAAGCTTTCTATCGATAGCTATGGTCACTTGGATTAT
GGTAACTAAGATATGAAGTCATCACAGCATGTGCCATCAGTATCAAAAATGACCTTATCA
TCTAAGAAGCTCTTCATGATGGGTGTATTCGGTGGGCTGTCAAAGGCAAAATCACAAATG
CCTTCCGTATCATCGTCCAATCCCAAATTATAGTTGTTTGTTCCCTGAATGTCCTTTGAT
TTTAAACTTGTATTGTCAAAGCGGCAACATATTTTATTCGCGAGAGAATATGCTCTAAGT
CGTTGTCTTCAAGCATTGAGCATGTTGTATGTAAAACATGAATCTGTGAGGTGCAGAACA
TAGACAACATTTTTTCTGTCAATAGAAAACAGAAAATTCAAAGGAAAACTAAAATTACAT
TAGAAAAACTAAAATTACATTAGCATTTGAACTGTAGAAAAAAAATTGCGAGAGAATATG
CTCTAAGTCGTTGTCTTCAAGCATTGAGCATGATGTATGTAAAACATGAATCTGTGAGGT
GCAGAACATAAACAACAGGAAATTCAAAGCAAAACTAAAATTACATTAGAAAAACTAAAA
TTTCATTAGCATTTGAACTATAGAAAAAAATGTTCAGCAATAACATGAAAAAGCTTGATG
GCATGTCTTTTTGAGCACATATACCTCATTCACCTTCTTATCCTTTATTTGCTTCACAAA
TAAAGGGCCTGTTGACCAATAGATATCAGACTTCTACCCTTCTACCCATTTCTTATGTAT
GAGCTTTTACAATTGAAATTTTGGACAAGACTGCAACCTTGGAAAGTTGCAGTCGTCATA
CACCTACCTACAATTTTTGTTTAGGTCAATCTTAGATTTCCTCTTCCATGCATCTCCCAC
TACCGAGATTCCGTTTGAGAGCATCTTTCTTATATCATTCCTCGTGTGGCCTGCATACTT
TTGGAATGAGTAGAATGGTGCTCAAAATCCACTTAGCTAACATCGTCAATGTTGAACAAA
ACAAGCACTGATTTAATGATGGCATAGTTTTGTAGGACCTCAAAAAAAAGGTCAATGTTA
TCTACTTCAAGAAACTGAAATACATGTGTCATGCAGGCTCTAAGGGGAAATGTGATGGAA
GCTTCATCATCAACTTCCTTTCAGTGTGGAGATGACCTTTTAATTCACTATGCAAAGGAG
AATAACATTGCTAAGAAAATTACCATGTTTTGAGAAATTAGGTAAATAACTTTCGTACAA
TGAATTTTCAATGTAAAAGTAGCCCAGTAGAAATTAGAGCATAATATCATGACGTGTAAA
AAAGCTCAAGAAATTACACTGAAAATGCAAAATTGTAAACTGAATTCAAGCAAGAAGCAA
CATAGAAAATAAACTGAATACCTAACCAACTTTCTATATACTGCAGCTAATATCTTTCAT
ATCGACATAAATAGAGAAGCTTAGTAAAAATCAGCTAAGAATACTGAAGAGCGCTCTGTT
ATGTTCAATGACACATATGTGAAGGGTTAGCCAAACCCCATTAGTAAACTAAACATGTTA
GCTTTGTAGTAAAACAATTTAGGAAAATGGATGAGTGCATCCAGGGAGGAGCAATGGATC
GGAAGCTCACCTCAACCAGCTTCAAAACTGGCAGTGGCCTTCACATCCAGGCTCGGGAGA
GATCGACAGCGCCCTCACTGGACTCAGTAGCAGGCGAGGGCAACCTCAATCTCGAGCAAG
GAGAGGCGATGGTCGGGCGGGGCAGCCAAGCGTGCGCCACTTTGTTCTCTCCACTCCCAG
ATCCAAGTACCACCAAGGAGCATCAATGGCCTGTACCTGAACCACCAACAAGGAGCAGAG
GGGAGGACATAGTTTTCTTGAAGAGAAGAGGAGAGGGACGAGCAACAAACAATAAAAGAT
CAAGAGCAACTTATATGGTGGGCTCAGATTCGCCTTTCCTCGATCATATAACCTACCCCC
GTCATCTCTTATCACCAGATCAATCTGTTTATAGTGGATCTGCCCTGGTTATCACTCAAC
AAGAATGCCCATCCAAGGACAAAGCAATAAGTATCACAGGATCAAAAAGGTTTCTAAAGA
CAAGAGGGAGGATCCTACTTGATACCCACAGGTTCCTCGATTGCTCAAAGTCACACTTAT
TTCAGCCACGGTTAATTATCATCGCCCTAGTAAGAATGGCCTCACAACAGGCGGTGGCAC
GATCAATATTCATAGCGTTTATAGAGTGACGTGGAGCCATTGGTTCTGCCTAGCAGTCCA
ACATTTATATGTAATCCCAAATCATCACATGAGCTCCTATGATAGCAACTAAACATGAAC
ATCAGCATGCAAACCCCAGAATAGCATGGATCCACAACTACAGAGCTCAAGTAGGAAGTG
ATGCATGAGTAGGGCATAGAGCATCAACCAGACGAGCACCACATCAATATAGCCACGGCC
ATGTCCCAGAGAGTAGCCGAAGTAGAGGAGCAGGAGCAAGATGGAGCTCACCGAGGGAGG
TTGTAGCCGAGGCAGTACTCAGCGGGCGCCGGGGTTGCACTTGAACGCCGTCCAACCGGA
GATGCTGCTTCCTACACCGTACATCCACCACACCGTCGCGTCGAAGTTGAGCCTTGCACC
GTCCCGTCGACAAGCACGAACGCTGTCAAGCATAACAAATTAAACTAAGGAGGTTATTAT
TACTTGAAGTGAATACCTGATCTTCTACAATAATGCGAGCAAAACCAGCATAAATACTGC
AGTACTGTGAAGGAAAAATTCAAAGAACCTGAGTGGTCACCTAGGACTTAAAATACTGCA
GTGTTGTTAAGGGAAAATACTCGAGTATTGTGCATTGATCTTGGCTGCAGTCTTCTGCTG
GACATAAGTTAAGTCTACTTAGTTTAGCGAGCTTCAAGTATTAAATGTAATGAATAGAAA
CGACCAGAGAGAACTTGTCCAGCAACCTGAATACATCACATAGCAGAACAAAACATTGAT
TAGTTATTTAAGGAAACAATTAGGGTAAACCAAGATAATGGTTCAATAGAAAAACATCAG
GTCAAACAGCAGAAGACCAGGTCATGTACTACTTAAGTAATATGGTAACCTATGCATCAT
ACAAACACATGCCCTGTTGATACAGAACTGCAAAAGTGAGTGAGAACTTGGAGATAAATT
TGCATATGTTAAATTATTAGGAAAAGAAGTGCGATGATATGCAGCAGGAAAAACACATGA
TAAAGGAAATTTTATGACCTCAATTTCAGTGTATAGAGAAAAAAAATAGTTGTTCAGTTG
TATATACGGTGGGAATCAATCATCGCAATATCTCGAGGGGTGCTATAGCTGATGCTCTGC
CTCTATTTGAGAACATAGAGCTTTGCTATTTTCTTGTCCATGCCTATTGATTCAGAGCTC
TCTCTATCTCTACTCTTTTCACAAACTGGTAGCTTCCAACATCAAGCAATTTCTGAAGTT
ATTAGTGACTGAGAAAGACGAGGAATGAACCCATACGAGCAGTAGGAATTCGTGCATTTG
TTTCTCAGAACCCGAAAAGAAAAATCAAACCCCTCTTCGAGAGCCTATTCCCTGTGACTT
CCTTAGACACATAACCACCACAAAGGAAGATTACTTTTAGCACCATTTGATTCTAATACT
CCGAACTGTGCAAAATCAAAGTGCCAGATGCATATGTCATAAGATACAAAATATTTACAT
TAACAATATTTGCGTAAAATGGAGCACCATTTGATTCTAATACTCTGAACTGCGTAAAAT
CAAAGTGCCACATGCATAAGTCATAAGATATAAAATATTTACATTAACAATATTTGCGTA
AAATGGAAAGTCTGTACTAATTGATGCTAGTCGTTGTACTAATTGAGTAACTGATGCTAG
TCCTCCTGGTGCTAGTGTTTTTAGAACTAAACAGATTAACTAAACTGAGAGGGGGACAGG
TATTGGACAGGAGAGGGGAAAATGGGCAGGTAAGGGAGAGGAGCAAAACAAGTAGACACC
CATGCGGACCTCCAAAGCCAAAAAAATCACATAGCAAGAGACAACACGTACTCAAATCTG
AAAAGGAAGAAGGAGAACCACCGTTCGTGGAGGTAGAGCAGGAGATGGCGCAAAGGGGTG
AACGCACCTGCCGTTGGTTGAGGCCATCCGCCACGACCTCCAGCCCCGCTGCTCCTCCCC
CCATCGGCAGCCTCCCTTACTCTTCCACCCACCCTGACGCCCTGCTTTTCCATGGCGACG
ACCTGCGCCCGATCTGATAAGAAGGAAGAGGCAAGCCGCGGTTGGCTGGGTGACTAAGCG
CCTCCTCATCCACAACGCGTGGTCGGGCCGTGCTAGCCGGGTGTGGACACAGGAGAGGAG
GAGGTGGTGGGGGTAGAGGTGGAGGAGACTGAGGCGGACGAGAGGGAGGGGAGGGCTTCG
GGCGGAGCAGATCTGGCGTGATGGAGAGAGCGGGCCTCAGCCTGCGGTCTAGGGTTTGGA
GGAGAGAGCTGAGGCGGGAGGAAGAGGAGAGTGGCGGC