morexGenes - Barley RNA-seq Database

Contig contig_70094
Source Contig contig_70094
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_70094 (7746 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_70094

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76090	2	3597 bp	None	Available	Available	None
MLOC_76091	4	1991 bp	None	Available	Available	None
CDS Structure of MLOC_76090

CDS Structure of MLOC_76091

Contig Sequence (7746 bp)

>contig_70094 7746 assembly3_WGSMorex_rbca.fasta
CCACCCTAGAGGCGGGAATGGAACGCCGGGAACTCCCTCGAGTCCCTAGACATCTCCCTA
GAGACGGAGGAAGCCACCACTAACGAGGAAGCCACGACAACGAGCCGATGCTGCCCCTGA
CTCTGTGTGTGAATTCTCTGAACCTCTCTGAATCTCACGTGAGAAAGGGAAGAAGAGGGG
GAAGAAGGAGATGGCGACGGGGGAGGAAGATGGCTAGTGCTGGAGAGGGGGGGAGGAGCT
TTTATTAGCCCAAGGACGCTGGGTGGCCACTGGATACGACCAGGAGAGGATCAATGACTC
TCTCCTGGTTCGTACAGGTGTTGACGAACGCAGGAGGAAGAGGAACGCAGGGCTGGGCTG
GCTGGGCCTAAAGGTCTACTGGGCCTCCTCTCTCTCACACACAAAGGAAAAAAATACAGG
GGAACTAATCTAATTAAAACCCACAACAATTTTGAAATAAAAAACAGGGAGGAAAGGAAA
GGTAAAGAAAAAAACTAAAAATAAAACTAAGCTTCTAAAATGTCCTCCTATTAATAAAAA
TATATGGGACATTTTTAGAGCAAAGTAAAAAAATGTTTTTATTTGAAGTTGACTCTGTTT
TAAAATAGAGACAGAAGGAAAAACACAAAAATAAAGCCATACGCTTTCCCCATAATTAAT
AGAAGGATTTTTAAAAGAATATAAACATTTTTATTTGGGAAAATCTGAAACTTTAAAACA
ACCCAAAATAATTGGAAGAGAGGGGGGGGGGGTTTAAGGTGCTATGGTGCAACAAGGGGT
TTTGAGATGCACTTTTTGCACACACTCTCATGCCAAGATCAACATCACACATGCACTCAC
ATATCCCACCAAGGTGACACAACAACACAAGGATCAAAACAAAGAAGACAAATAATATGA
TGCTATGCATGATGCATGAAGCACATGAAATGATGACACCACTAAGTTTCACATCCATCT
AATTAAAAAACAAGGTTGCCATACAAGGAAATGTTACATAAAAGAAAAGGGATGCACTGG
GGCTGTCACATGCATGCTGCTGCAACGCAACAATAGGCATGCCAAGCTAAGAGCATATAC
AACCAGACCCCTCGAACCTTTCTCAAACGTCTGGCAAGTCACCGGGTCGTTGTTTGATCA
TAAAAATCGGATCCAGACATGCCTCTTAAACTAGACTCAAATGCCCGGGCTGATTGACAC
CCTTCATTTTCGGCCCAAATATGAAACGGACATGGGGAGTTCGGACGCGCCCGAACACGT
CAAGGATTGACAGCTTGACCCCATATGGACTCGCCGAAAAATTTGATGGTTCGACGGACG
CCTCGACCATCGACGCAATGTGAACGCCGCGTGACGCTGCTCCGGGGTCGGGGCCGGCTA
TTTAAGCCGGCCGGCGCCCCCTCTTCCAAGTTATCCATGCTCTTATAACATGAAAAGCGT
GATAAGAGATGTTGGCTCGCCAAATTGCCAAGAGGGGAAGGAGCAAACGAGGAAGAAAGG
CAAAAGCAGTACCAAAGTGAAGAATAACATCCATCCATTTGTCCAGAATGTCAAAGTAAA
TAAATTCACATTAAGGGAGATGAGCTATAATTTTTTTTATATAACTTCCTACACTTTCTT
CCATACAACTTGCTTTGATTCAACTTTGTGTGAATAAATTATCCTGAAAATTACAAAGGC
AAAAGGTTTGGTGAAGTCATTGGGCCGGTTTGCGATAGGAGTTGGGCTCCCATTCTCCAT
CGGCCCTCACATTATTCGTCCTGAACCCTAGCTAGCTCGGATCAGCTGGAGCGGCGGCGG
AGCATACCATGCGAGGCGAGCGCTCTCATATGATCGGATCGGTGGATCCAATCGGACCCC
GCAGCCCAACCCCGACCGTCCCGCTCGCCTTGGCCGATGACCACGTCCCTCCAAAACGGC
GGCGATGATGGAGGGATCCGCCAGCGTCGGCCAGGCTCCCAACCCATGGACTCGCCGGGT
CGCCGCTCCTCGGGGCCAGCCCCTCTCGCCGCGCCTGCTCGGGGACCCCTCGGGGATGCC
GCCGGTGCGGTGGGACGTCCGCGGCGGCGCCGGCTGGGCACCGAGCGGCGGGTCCCGTGG
CGGGGGTTCCGGTCGGGGGCTTGGTCCGGCCGGCGCGGGATCTGAGCTGCCGTCGATCTG
AGCCGCCGGCGCTTGGCTGCATGTTGCTCTGGATCCGGTACGATCCCCATCTCTTTCTCT
CCGAGGCTCACGCACACACTCGCTCGCTCACTCTGTTTGTGCGCGCAGTTCACGCCAACG
AACCCAATCCCTAAGCCGAATCAGGCGAGCTCTCGTTGCCGGATAGCTGGCCAATCGTCC
GGTTGGTCGCCGCGTCAGTTCCGCACCGCTGTGGTGCTGCCAGCCACCGCAGCTCCATTG
CCTTGGATTCGGGTGTGCTGTGGGCTGGGAACCATAGTACGGTGTTTGTCTGACGCGTCG
TCTGCACCGAGAGGTTTGGTCGGTCGACGCCGGGCATGAGCAGCTCCTGAGCGCGAGCAT
GTAGTGGGTTTCATGGTCATTTTGCTTGGTGAGCAGAGGCAATCTCCTTGGAAAAAATAG
AGGGGTGATGATGATGACTGTGGGTCTGTGGCTGAAATAATCATGTCTTGAGACATCAAG
ACAGCCATGGCGAGGTGGGACTAAACAGAGCTGAAAAAGTCGGTGGTGTCCGCGTTGGAG
TTGGCCTGAGAGCCCATCCTTACCTCTGTTGCAGCCTGTTCAATTCGTCGCCAATGTTGT
GATCTGTGCCTAGGACGGTCGTTCTGTTGAGCGATAACCAGCGCAGTTCTCTTACACTGC
GATGGGTAGGTTGTGCAGCAAGAGATGTGAGCGTTGGGTTTGAAGACGAAAGACAAAACT
GAGCCCTATTTTGCTATGCAACTTACATAATTTTTCACTTCTCAGTTGCATTTTGTTTTG
GATTCGGTATGGATCCTCCTCACCTCTCTCTCTCCCTAAAACAAATCAGTCAAGCTGTCA
TTGCCGACTCACTTACCCATCATCCATATGGCTGCCGTGTTAGTTCCCTGACGCTACGGT
GCTGCCAGCCACTGCCATTCGATGCCTTTGATTTGGTTGTGGCGTGGGCTGGGAACCTCA
TAGTGTTGTCTGATGCGTTATCCAAGCCTGAGGTTTGGTTGGCTGATGCCAGGTATGAGC
AGCTCCTGACTCCTGAGAGCATGGTTAATAGTATAGCCAACTGCTGGCATGCGTGTATGG
ATATTATGGTCATGTTGCTGCCGAAGTTACTGTTTTGACCTTTTTGGAAAGGTTCAGCAC
AAAATGAACCATGTCCGTAACTTCAGCACAATCTAACCCCTTCTATCCATCCATCCATCC
ATCTACTATCCATCTCGGGCAATGATGATGAAACATGGCTGACATAAACTTGTCTTCGAT
TATTCGAGGAGCTCTGAGCATCAAAAACCCACTCTCCCCTCTTTTGGAACCTTCTATCGT
TCTCACCGAATATTGACGGCTCTGTCTTGGATGGTCATTCTGCTGAGTGATAACCAGAGG
AGCTCGACCTGGTGGGGGTTGATCTGGTGATAGAAGATGGTGGAGCAAGGGTTGTATGAT
GTATCAAAGGCGAATCTGAGCCCTCATAAATCTCAATGCCACTAATCGGTGTACTACCTA
TGATACTCCCATTGTGACCAGCCTTCCTCTCTTGCAGCCTGTTCAATTCATTGCCAATGT
TGAGCAATCTGTGCTCGGACGGTCATTCTAATGAGTGATAACCAGGGCAGTTCTCTTACA
TCGCGATGGATAGTTTATGCAGAAAGAGATGTAAATTTTGGGTTTGAAGATGAATGACAA
AACAGAGCCCTCTTTTGCTACGCAACATTAACCTTAGGTTCAGGTTTTAATAGGCCGGGC
CGGGGCCCTGCCGGGAGTTAAGGCCGAGCGGCCGTAGGATCCGACGTGGCCGGTCAAAGC
CAGCCAGCCCGCCCGGTGCCGCAGCCGAGGCGAGAGGTGATGTCGTGTCAGCGGTGCAGC
GCAGGGCCGAGCAAATGCAAGGGTCGCGTCAGCGGCATGCTGGCTTCTTCGGCTTTCGGA
CCCAACTGTCGTATTCACATGCCCGCAGAGAGCTCCCCTCCCTTCCAGAGCCTGAAGCAT
TCCAGAGCCCTCATCTCCCTGCTCGCCCCCATTTTCTTCCTGTCCGGCTCCGGCAGCAGA
CCCCACCTTCACCCATATCCAGGAGCAGCATCCACATGCCCCCACCTTCACCCATATCCA
GCAGGAGCAGTACCCACATGCCCCCACCTTCACCCATATCCAGCAGCCACCGAGCCATTC
GTCGGACCTCTCACGCCGCGCACTCAGGGCCCGTCCGGCCGCCGCCGCCACCTCTGCACA
CTCCTCCGCTGCCACTTCTGTCCAGACGCACCACCTTCCACAGTTCCTGCACCACATGCA
GCGCCTCCAGTAGCGCCGAGCAGCCTATCATCACCACCAGCGCCGAGCAGCCTATCATCA
CCACCAACCCACTGCACAAGCACGACGACAACCTGCTTCCGGCGCGCAGCCCCCGTCGTC
GCCCCTCGTCGGCGTGTTCGTGGACAAGAAACACAAAGCCGAGCGTGTCCCCCGCTTCTA
CGCCGGCATCGCCAGCTTCAACCCCGTCATCGCCACCGCCGCGCGCCACACCAACATGTG
CCTCACCCGCCTCAATGGTGCTCTGCGGTGGCACCTTCGGCTGCCGCAATGGCCGGCTCC
TCCCCTTTGAAGCCGACGCCGACTCCGACGGATAGCTGTGCATCTACGACCCGCTCTCCC
AGCGGCCTGTTGTTTCCATCGCCCCACGCACGCATCTTGACGACGGCTGGAAGTGCCTCA
GTGACTGCCTGCTCAAGCTCGATGGCCTCGCCTGCCATATGGATATTGTGTCCGTGGAGT
AACGCGGCCAGCAGGTGCAAGTGCAAGCCCAAGGCTCCTTCCGCATTATATCCTTGCAGC
GGCAACGCAACTCCAGATGCAAATGTTTCACGGTGCAACTCCATGGTGATCAAACATCCA
TCAATCTCAGGAACTCAAATGTTTCACAATTCAGTTACATTTTGTTTTGGATTCGGTATG
GATCCTCCTCATCTCTGTCTCTCTCTCAAACACTAAAACAAATCAGTTAAGCTCTCATTG
CCGACTGGCTGACCCATTGTTTTGGTGGCCGCCCCGTCAGTTCCCCATCACTATGGAGAC
CGTACAGCATTCCATTGCTTTGGATCCGGTTGTGGCGTTGGCTGGGAACCGTACAGTGTT
GACTTGTGTGTCCTCTGAGTGGGAGGTTTGGTCGGTCGAGGCAAGGTATGAGCAGCTCCC
GAGACTGATCACCATGGAGGCAGAGCACCAGGTGAAGGAGTCCAAGGGTGGACTCCTTCT
GGATGTTGTAGTCAGCAAGGGTGTGGCCATTCTCCAGCTGCTTGCTGGCAAAGATCAGGT
GCTGCTGGTCAGGGGGGATGCCCTCCTTGCATTGTCCTGGATCATGGCCTTGACATTGTC
AATGGTGTCAGAACTCTCAACCTCCAGAGTGATGTATGCATGCATGTATGTGTGTATGGA
TACTATGGTCACGTTGCAGCCGAAATCACCGTTTTAACATTTTTGGAAAAAAATCAGCAC
AAAATGAACCATGTTGGAAATTTTAGCACAATCCAATCCCTTCCATCCATCTATCTATCT
ATCTATCTGGGGCGATGATGATAAAACATGGCTGACATAAACTTGTCTTTGATTATTCGA
GGAGCCATGGGGATAAAAAACGCCACTCCCCCTCTTTTGGAACCTTTTCATTCTCACCGA
ATATTGCCTCTGTCTTGGATGGTCATTCTGCCGAGTGATAACCAGAGGAGCTTGACTTGG
TGGTGGGGATTGATCTGGTGAAAGAAGATGGTGGAGCTAGGCTGTATGATCTATCAAAGG
CAAATCTGAGCCCTCTCAAATCTCAATGCAACTAATACTGTGCCGTCTACACACCTATTT
ATTCTTATCGCCTTTTTATGTTTAAAATTGATGAATTGTCATGGTTGTGGCATTGGGCCA
TCTCATTAGGAGCGACTTCACACAGATCACCTCTCATGGTGTTTGGTTTGGCTTCTCATG
ATTTTTTCATCCATGGTGGGAACCAGTTTGGTGCATCCCAGCCTTTTCTTTTCTATCCTT
ACTTTTCCTTGAATGGCTGTGATAATTCTGCTGCCCTTGGGTATTTTTTTTTCTGAAATT
ATCTTCTGTATCATTTTGGTTGTTTCAATTGCTATTTGACTTTCGATAATTTCATTTTGC
TACTGTTCTCTTTATCTAGTTATCAGTTTGTACTTTTGGGCACTCATTTATTTACTGGTT
TTCATCTTAAGGGTCATATAGGGCAAGTTCAGATGTCAAGATTACTGTTTCCTTCATGTC
ATGTTTATAAATGGCTGTGATGATATAGCTTCCCTGTGAGAGCTTCTATCTAACACCTGA
ATTGATTTAGTTGGTGCTAACCTAGGACTAGGAGTGATTGGGTCACAACAAATAACCTGT
TTAGCGGCTAACAATTACTGTTAAACATTGGAATTGAGAGGAATGGATGTGTGTGTGGGG
TGGGGGTGGGGGTGGGGGGTGGAGATTACATGGAATTAAGAATCCACTGAACAGTGTGTT
TGCTCACAGCAGAATGCTTTGAAATAATGATGCATCATTAAGGACTACTTTGTTTGAATG
AATAATTTTTCTTTGTAAGGGCCCTAGAAAGAGGCAGAGGGTTTCACATCTTTTCGTCAA
ACTATCCTATTATTTGCAACTGTATGTCCTTTGTTATGCATGTTCTTTTTCTTCTCAGCA
TTCCCATTTACTCTTAACTGCATTTTATGTTGCGGAAGGTCTTACATTCACGCATTTGCT
GCACTATGGCAACACAAGCATCAGTAATAGTAATAATTACATTCGGTATATAATGTATTC
ATTATATATTTATTTAATCTACCATTCTATTTTTCCTATACACTATGTTCAGTGTAATCT
GCAACATTAACCCTGTTTTTATTTGGCTTGCAGTGACTCCTTTTATGTGAAGTGAACAAA
TGTCAATTGCTTCTTTCATTGCCAGTAATACAGCCATCAGTGCAGTGTTCCAAATTAACT
TCTGAATACAGTATATATGTTTCCGTTGTATGTTGATTATAATTATGGTTTTCTGAATGG
CTATGGTGATTTCCGCCCCTTGGTCTCTTTCAACATATCCTGAGGTAGACATTCACATCT
CTTGGTTGATTCCATTCAACTTTGCCCAGTTAGACAGTTAGTCGTTAAACTAGGAGGCCT
TGCTCTGCAGCAAGTTACCAGTTGCGGCTATTTGTTGCTGGGCGTAGAGAGAAAGAAGTT
TTATTCCTTATGGTACTACCTGAAGCATTGTCCAACTTCGGTGATTCATGGTCCGGTACA
TCTGAACCATTCATTCAAGTAATACTCCAAAAAAATTCTCCACTTCTAGACGATGCCCGC
GTGTTGCCATGGGAACCTTGTCAAAATATCAAATAATAATAGGTGCTAGAAGAACAACTA
AACTAATGCAAAAAAAAAGAAAGAATATTCTCTCGGTTTACATTGTACTCCCTCCGTTCC
TAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTACATAGACATAT
TTTAAAGTATAAATTCACTCATTTTGTTTCGTATGTAGTCTTCTAATGAAATACCTAAAA
GGTCTT