morexGenes - Barley RNA-seq Database

Contig contig_69809

Source Contig contig_69809

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_69809 (2383 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_69809

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76006	2	1367 bp	AK368965	Available	Available	None

CDS Structure of MLOC_76006

Contig Sequence (2383 bp)

>contig_69809 2383 assembly3_WGSMorex_rbca.fasta
TGGTGTAGACCGTCGTTGCCATGGTTGCCCCACGGCGCTCGGGTGCCACCGGAAGATAGG
GGGAGAGAGCACCTTTCCTTCTTATTATTTATAAGACAAGAAGTCACGGAGTTTGGAATT
AATTTTTTTAACTTTGGGGTTTCAAACTCCCCAGAAGCCCACGTAAACCAGATAATAAAG
TCACAAAATCCACACTCAGTGAATTTGATTGTCTACACGTCAGTTCCAGAGAAATTTAAG
TACAATGGGGAGTTAGGAAAACATATACTGCAGTATCTTCTTGTGAGGAGAGAAATTCTA
CAACGCAGCAAGCGCACCACCTACATTTGCAAGACTAAGCACCACCCCTCATGCCAGCAA
GCATTTTGCTCGTGTCCTTGCCTCCGCCCAATTGTTTCAGGAGAGCCTCCAAGCCACTTT
TGCCCCCCATCTGCTGCACCACTTGTGGCGGCATGACTTTGAGCATCTTCTGGATGGCCT
GAGCACTCATCTTTCCATTCGGCGGTATCAATTTCGACACATTCAGCTTGCTCCACATCT
TGGCTAGTCGCTTGTACTCTTCCAACATCTCCATCACGTCCTTGACTTTCCTGCCGGACC
CTCGAGCGACCCGGATGATTCGCGACTCGGTCATCAGCTTCGGGTTCATGCTGTCGAGCT
CTGCAAAGTTGATCAGCGGTGGGGTACGTTTCAGAAGATCGCTCATGCAGTATTTTTGTT
GCTACACACAAAAGAGATTTACTCACCTGCAGGTGTCATGGAGTCCATAATTGTCATGTA
CCGCTTGAACTTTTCTTTGCTTTGTTTCTCCTGTCCTTTTGGCAACAACTCCGAGCTAAA
CCCAGGCAGCATGGAGAAGATCTGCAAGATAAATAAATAAATAAGAAAATGCAGGCTTAA
GCAATGCTATCACAGAAGTACAGTATGAAAGTTAATCAGATGTTAACATGACAAATATAC
CTGGCTCATTGGTCCCATTTTCAGGAGATTCTGGAATTGCTCATACAGAAGTCTGAGAGT
GAAGGCTCCTTTAGACAGCTTTGCCACAAGGTCAGATTGTTGATCAGCAGGCACAATACT
CTCCATCTTGTCGATTAAGCCAGGCAAGTCTCCTCTACCTGCCAAAACCATCGTTAGGTA
AACTAGAAAGAAGAATCGCCAAGTTATTAACTATACTGAATGTAGTTACTAACCTAGCAG
ACGGGCGACGAATGGTTCCACGTTAAAAACGTCAAAATCATCAATGTGTTCTCCAGTTCC
AATGAATATCACCGGGCTTTTCGTAGCTGCAACCCTGGAAACAAGAAGCAAGGGTGTAAA
AAAATGGTTTGTATTCCTAAAGTGCTTATACTCTGTCAATAGATATATTGCCCAACTTGT
AAAACACACAATAATGAAACTAAATCAGGATTTGAGAATACAGCGTAGCAATAATAGTCT
GAACTGTTTCACAGACACTAAGCATATATTCAGTCGTGCACAAAGAAATAAACCTAAATC
AAGTGCCATTTTCCTGTCGAACTAAAATAATAAGTGAACTAGTAAGTAGTAACACAAATA
GCGCAAGGAGGAGCGAGAAAATAAAGAGAAATACTTACGCGCTCAGTGCACCGCCTCCCT
TCGCATGACCATCCAATTTCGTGACAATCACAGCACCAACGGAAGCACTCTGTTTGAATG
CCTGTGCCTGATCAAAGGCAGCCTGACCAATGCTGCCATCCATCACAAATATCACCAGGT
CTGGTTTCTGTGGAAGAAGCATAAAAGGCCAGTCAAAATCTCAATACTAGAGGATAACAG
TAACAATGCAAGACCATGGCAGTGTAGATACCGTTGCTTCAGCAACTTGGCGCATCTCCT
CGAAGAGTGCAGCCTCCTGCATATGGCGCCCACTCGTGTCGATGATAATGAGATCAGATT
TCTCTTGCCTGAACTTTTCCAGGCCCTCAACAGCAATCTTGACAGGATCTGACTCCATGT
AGCTGCAAAGTAAGACAGTGATTTCATTTAGAACAAAATTTGGGGAGAAGCTTTTAACCT
ATAAGTAATTAAGTCTGTCAATGTAGCTAGGGTACCTTCCGTAAAAGGGTATCTTGGCCT
TGGTTGCGTTCTGCTTTAACTGATCAAAAGCACCGGCTCTGAACGTGTCGGCGCAAACCA
GCGACGGCTTAAATCCCTTGCGCTGATGATAGTGCGCGTACTTGGTACAGGTGGTTGTTT
TTCCAGAGCCTACAAGCATACATCGTCATAGATTCAGGTATTATCGCACATCAATGTTGC
ATTATTGTAAATTTGTAACTCAAATCAGCAATCATGCATATATGGAGATCGAAATTCAGA
AATAGGTGTGGAAGTAGTACACAAAAAACGGAGAAGCAGAAGG