| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_69788
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76003 |
1 |
2014 bp |
MLOC_76003.1 |
Available |
Available |
LOC_Os05g41270.1, FRAME:+1, EVALUE:0.0, 13105.m04379 protein CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_76003
Contig Sequence (8245 bp)
>contig_69788 8245 assembly3_WGSMorex_rbca.fasta
ACATGAGTATGTGTCTCTCTCTCAGACAAATGAATCTGGCAGGTGTATGTGTGTTCTGAG
TGCTTCCTGTACGAATGAGAGGTGGTGGAGGGGTATATATAGGCATGTCCCAAAATCCAA
CCGTTACAACATTATTTCCCAACTCAGCGAGCCCGACAGGAAACTCGGTGGTACCGAGTT
GCACTAAATGTGGAAACTTTTGAAATCTCGGTGAGACCAATATGAGAATCTCGGTGGTAC
TGATATGGTGACCTAGGGCAGTTTCCAAATCTCGGTGAAACCAATTCCAAAACTAGGACA
TTCTGATTCTTGAAATCAACGGACCAGAAAATTGGTTAGTGACTTTCGATGGCACCGATA
TGAAAGTTGGTGGTACCGAGAGATTAGGGTTAGGCAAAGGTTGTGTTTGTGGAAAATCGA
TAGGACCGAAATGGAATTCTTGATGGCACCGATTTTTGATGTATAGGCTTTGGACAAAGA
TTTCTATGGGAGAATGGCTGAGTATTTTTNNNNGCTATCTTTAAGCACTTGAGCAACCAA
TTCATCATAGACACCTCATCCTTTTTATAGTATTGGCTTTCCTANNNNCTCAAATGTGAT
TTATCACAAATATAAAATATAGAGTCTTGTAGCTTGAAGATTGGCCAATCCTGTTCTTTT
CCTTGGATCAAGGGGCTTCTCCTCACAATCCTTTAGCCAATCATCTCTGTGGACTAAGCC
TGATATATACTCCCTCTGTTCCTAAATATAAGTATTTTTAGAGGTTCCATTAGGGAATTA
CATACGAATGTATATATACATGCTTTAGAGTGTAGATCAACTCATTTTGCTTCGTATGTA
GTCACTTAGTGAAATGCATTAAAAGACTTATATTTATGAACGGAGGGAGTACTAGGTAAA
AATGTTAGTCCAAGANNNNNNNNNNNNNNTCATGAATTATCAAAACCACAAAGGGGGCAT
ATGTGCTTTCAAGCTAGGGTTTGTGGGGGAGTGGTTATGGGAGGAACAACATCAGCTTGG
GAATGGTATAACCGAGAGCTGACCATAGAAATATGCTATCTCCTCGTCCTCGACGCAAGC
ATTATGACAAAGCGTATTTCGCCGGTCCGTCTTTTGAGCAAGGACACGCCCACAAATGTA
TGGGGCAGGGTGGGTCTAGGGAAGGTGGTTGGCGTCATCCTCACAGAAGCAACGTGCGCC
AACCCTCGCATGGATATCAATCTTTCATGGCTGCCACCAAAATGTTCGAGAGCTCAACTC
CGATCCGGCTGATTTTGATCCAAATCCAAACTACCCAAATTGGAATTACGAAATGGAGGG
ACAACCCTCGCCGGAGAAGAAAAATCGTCACGACACAAGCCATGTAAGACCTTATGAATC
AAAATATTCGAGGATTTGGTAGTTGAAGTTACCCCTCCTCGATCTCCCAAGCATGGTGGC
GGCTCCAGATCGCAATATGCCTATTGGCCGTCGCGCGACGTACTCCTGGTTCAGGGGCAC
AAACCCCTCGCAGAGTACACCCATCGGGTCTTCCATGAATCAGGGATGTGTGGGGGCTGA
CCCCCGGCGGCAACACGAAGGGAGGGAGATTGGCTGGCCCAACGACCGATGTGCGCTGAT
GTCGAGGCGCGAAGGATTCCTTGTTTTGTAGCGCCTCCGTTTCGATGCTTGAAATGGATC
CGTTGATTCCGCCTCTTGGATGGCCTAGAAGATCATCTGGTAGTCCATCCCTCCGTCGTT
GCCGCTGAGTCTTGCTCGTTCCACGAATGTCGAGTTGCGGGTGATACCCACGAATACCGC
CGGCCATTTGCTGCGGTCGAGGAACTTCTCCCTCACATCGCGTACGATCTCCGCCTGCGC
CACCGGTACATCCGCATCTATCTCCGGCAGCAGTTCTACCAGAATCATCGATTGCGGTAT
CGGAATCAGCATCGACGCCACCACCGGGGTAGTTGGATGCACCCGTCTAGCCGGAGATCT
GCTCGCTCGCCCCGTCATCTAGCATCGCCTGGTGAGCTCTCTCCAAGAGGGAGGCGACGC
ACGAGTGGTAGGTGAGACTTCTGGTGGACGGGTGGGTGGAGTTGGTAGGGGATAAAGAAA
GGTCGTGGTGGCCATTAATGATGGGATGTGGCACGGGTGGAATCGCCTCTCGGTCGCTCG
CATCACCTGCGGAACCGGCCATCCTGACCTCTGCACATATCTAACAAAATCTGTTCTCCT
TCACTCCAATGTCCATGATCTCTGGAGGGAATTTGGAGTAGCGGAGCGCAATGCAATTTA
AAGACCGGGTCGATGGGATACGACGTCGGTCCCATGCTCCGCCTACAAGCTCTTCAGATC
AATGCTATAAGGGCATCTCCAACAGTTTATTGATTAGCTTGTTGGTAAAATATGCCATGT
CATCAATCAAAACCTCAACATACAACTACTCCAATAGGTTGTATCTAGTTTGCCCAATAA
GATGTGAGATAATGAATAAGGTGCTCACTCATTCTACATTGGAGGTTGTGCAAGGGTGTT
GGTTAATTTACATACAACCTTGCTCTTTATTTCTTTATTTATTACATGACACATCATAAA
AAATCCTATGTGTTAAAATCTATCAACAGCTATCTTACAACCATCGAAGATGCTCTAAAT
GATTGAAGAAATGACGTGTGATTTTCTTTTCCGTCTCTTTGCAAACGCACGAGCTGGAAA
TGGAATACCAGTTCGCCCGAAGCTGACATGGGTTGATGCCCAAGTTGTTCGGCACACGGA
AGCGTCTATTAGTTTTCTCTCGTGGGCGAAAAGACAAAAACCAAAGCGGACGCACGAGCA
CGAAGCCGCTGCCTTCCCGCCATTCCCTCCCCGCCTCCCTTTTAGCGGCGACCCCCAAAT
TCCTCCGCGCACGCGCCCAATGCCTACCTGGGAACCATCCCCAAGTTCCCGGCACGTCTC
GCTCGCCGGCGAGCACCCCCTGCGCCGGCAATGGGCATGTGCTGCCGGTGGTTCCGGAAG
TCCCACCCCGCGGCCTCTGGCTCATCCCGCCCCTCCGACGGGAGCTCCGGCGCGACCTCC
TCGGCGTTGCCCTCCACCGCGCCGCAGCCTGTCAAGCCGCCCGCCCCGATCGGCCCCGTC
CTCGGCCGGCCCATGGAGGACGTCAAGAGCATCTACAACGTCGGCAAGGAGCTCGGGCGC
GGGCAGTTCGGCGTCACGTCGCTGTGCACGCAGAAGGCGACGGGCCAGAAGCTGGCTTGC
AAGACCATCAGCAAGCGGAAGCTGTCCACCAAGGAGGACGTGGAGGACGTCCGGCGGGAG
GTGCAGATCATGTACCACCTGGCGGGCCAGCCCGGGGTGGTGGAGCTCAAGGGCGCCTAC
GAGGACAAGCACGCCGTGCACCTGGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGAC
CGGATCATCGCCAAGGGCCACTACACGGAGCGTGCCGCCGCCTCGCTCGTCCGCACTATC
ATGGGGATCATCCACACCTGCCACACCATGGGCGTCATCCACCGCGACCTCAAGCCCGAG
AACTTCCTCCTCCTCAGCAAGGACGAGGACGCGCCGCTCAAGGCCACCGACTTCGGCCTC
TCCGTCTTCTTCAAGGAAGGGGAGGTGTTCAGGGACATCGTGGGCAGCGCCTACTACATC
GCGCCGGAGGTGCTGAAGCGCAACTACGGGCCCCAGGCCGACATCTGGAGCGTCGGCGTC
ATGCTCTACATCCTGCTCTGCGGCGTCCCGCCCTTCTGGGCGCAGTCGGAGCACGGCATC
TTCAACTCCATCCTGAGAGGGCAGGTGGACTTCAACAGCGATCCGTGGCCGCGCATCTCC
GGCGGCGCCAAGGACCTCGTCAGGAAGATGCTCACCTCCGACCCCAAGAAGCGGATTTCT
GCTCACGACGTCCTCAGTAAGCGTGCCATCGTTTCTGAATTCCGGCCTGCTCTGCTGCAT
CTGCGGTTGTTGCATCCATACATATTTGCGATTAACTTTCTCTTTTGCTGTTCAGACCAC
CCGTGGATCAAAGAGGACGGCGAGGCGCCGGACACACTGATCGACAATGCTGTCCTGGGT
AGGCTCAAGCAGTTCAGAGCTATGAACCAGTTCAAGAAGGCCGCGCTAAGGGTACATACT
TTCTAGTCTGAATTCTGAAACCGGGACAGCATGAACAAGTTGAAGACGAGCTCGTCTGAC
GTGTCCTCCTCAACAAACCATGCTTGGCAGGTGATCGCCGGATGTTTGTCGGAGGAGGAG
ATCAGGGGGCTGAAGGAGATGTTCCAGAGCATGGACTCAGACAACAGCGGCACCATCACC
GTCGACGAGCTGCGGAAAGGGCTGGCCAAGAAGGGGACCAAGCTCACCGAGGCCGAGGTC
CAGCAGCTGATGGAAGCTGTAAGCAGACCGAAATCGATGACTTCCGGCACCTTGCATTTG
CATTGCCGGTTGGTTAATTACGCGATGCTCGCAGGCGGACGCTGACGGGAACGGGACCAT
CGACTACGACGAGTTCATCACGGCGACGATGCACATGAACAGGATGGACAGGGAGGAGCA
CCTCTACACCGCCTTCCAGTACTTCGACAAGGACAACAGCGGGTACGTATATAGACTGGT
ATCTGTGATTTCTGACGACGTGCTATAATGTTCAGAATTCTGAACCACTGCTGCGTTGCA
GGTACATCACGATCGAGGAGCTGGAGCAGGCCCTGAGGGAGAAAGGGTTGATGGACGGCC
GGGACATCAAGGACATCATATCGGAGGTCGACGCCGACCACGTAAGTTCACCCGCGACGC
TACTCGCCGCTGCATTTGCTCTCTTCATGCCGTGACGGTGTTGGAAGATGCCTGGCTGAT
GGGCGGTGACCGTGCTGCGCGTGCGTGCAGGACGGGCGGATCAACTACACGGAGTTCGTG
GCGATGATGAGGAAAGGGGCCCCGGAGGCGGCCAACCCCAAGAAGCGGCGCGACGTCGTG
CTGTAGCGAGCTACCTCCATCAGGCAGGGAGCACCAAGGATCTCGGGAGCGCGTACAGTA
CGTCCTTGCAGACAAGGACCGGCCGTTTGGCATGTGCCACTTGAATGTCGTGGTAGGTAG
GCACACAACACTGCAGCAGGTGAAACACAAGGATATATACCATACAGGGCATGCTTGGAA
AAGGGAAACTCTAGGATGTGCAGATCAGCCAGGGGCACTGAAATAGTATAGTTTTTGAAT
TAACTAGCACAGTTGCCTTGGGCACCATCGTTAGTGTATTTTATACAAATGTAAAGCATT
TACTCTCATCGTATACATAATTTGTTTCCTCGTGTTTACCCCCTTTATTATAAAATACAC
TACATTTAGACATGTATGTTTTTCGAAAAGAATGAATGCCCCCGGCCTGTATGTAGATAA
AGGTATAACTTTTGTTTTATTCTCTATATTTTTTTTCAACTTAGGATGGAATTTATTGGC
TCAAAATGAGCAACTACGAGCACATATCATGCCTCTTTGTAGCTAGAATGCACACAATCA
AGACTAACACACATATACACACACGCAAACGCCGACAGCTAGCAAAATCATATAAGATCA
AAACTATATCACTGCTTTTTATGAAAGGAATAACAAAACATTTTTAACAAGACTTTTCAT
GATGTATTCTGCTTTTCTCGCTCATATTTATACACTCGGGCATGGAGTTCATAGGGGCAC
CTATAAAACTAACCCGCAATCAGATCATCCGCTAGATCAATTGTTCTCTATCATTATTAT
CTTTCCATTTTGTGCATGTTTATGTAAATAATAGCATACACGTGTCCATATCTTTCTCAC
AACAAGATTACATGATTTCATTGAGATTTTTGGTTCCATATACAATTAGTTTGATGAGTC
CATGACTTATAAACAACATGAAAAAATGTACTTTTTAACAAATAAATGACCACCACGCTA
TTGAGCACTCTAGGAAATAACTATTCAACATATTCCTCTATGATGGTCAACCTACTCCCT
AAACAGGAATAAAAAAATGATTAGTCTTTTTTGAAATTGTAGAGGACTTCTTGGGCAGTC
AAGAAATGTGGTATGTCAATCTGTCTAGATCATTTAATTAGAAGTACCATTTGGACTTCT
TGGGCAGTCAAGAAACTATGAGAAAAGCATTTCCTTGATAGTTTTGAGGAAATTTGAATT
TTACTGGAAGTAGGTATCCTCTTTAGGCAAGTCTGGAGGCATCCTTTGTGGTGTTAAGAA
GGATTCCTTGGACATTGTCTCCTACCAGACTGGAAGATATGTCATGAAATTTCTGTTGTG
GATAAAAGAAAAAAGTATATGAAGTACAATATCCTGGTGGTATATGGTTCTCCTCATGAA
GACTATAAAATGGAATTCCTCGCCAAATTAGCTAACTTCTGTAGCAATATTGATTACTCT
TCCATTGTGGGAGGTGACTTTAATATCTTGAGACATGTTGGTGAAAAGAGCAAGAAAACC
AATCCCAAACACTATTCTGACATCTTTAATTCTATTATTAATATTTCTTGTTTGAGGGAG
GTACATCTTTAATTCTATTATTAAAATATATTTTTTGTTTGAGGGAGGTGGATATGATTG
TTGGCTGATATACCATGTCTAATAAACAATTTAATCCCACCTTGGAAAAATTAGGCAAGA
TTCTTATGTTTAGCACGTGGGAAGTTGTGCTTTCATTTACTTTTGTTAGGAAACTGGTAA
AATACACCTCTGACCATTGTCCCTTGGTGCCTAATACAGATGATGTTTCCCTGTTCATAT
TATGCTGCGTTTCGATGTCTCTATTGGGCTCGCTGTAATGGATTTGGTATTGGGTTGCCT
CACTTGAGGTGTTTGCATGTACTCTCTAACAGCAGACCGAAACGGTAACGACCACACAAG
AGTTTTCGCTAGCACATGCACACTCCTCGTGGCAATTCGGAGGGCTGCAGCCGAATTTTC
TCAAGCCCGCAAAAGAGAATGGTTCGGGCCTCTCTTTTGTCCCTTCGTACCCTCACCACG
AGACAGAGGTCGGCAGCGCCCACGCAGACGCAGATCGAAGACGACGACGCCCAGGTAGAT
CAAAGACGGCGATGCCTAGGCAGATCGAACACGGTCGTGCCCTGCAGATGGACGTTGTCA
TGTTTCCTTTTTTTTTACTCCGCCGCTAATCCCTCCTCTCCCCCTCGCATCCCTTTCTCT
TGTCTCCGGCCATGCTCATCGCGGACAGATCCCATCTGACTTGTGATGGTTGTGGCTGCA
GTCCCTTCCCTTCATCCGCGTCACTGCAGTGACCCAACACCATAGCCCATCTCCTCTCGG
TCAGGCTTCCTCAGCCGAGACATGGCTCCCCTTCTTCCTGGTCCTCCTCTTCCCAGCTAG
CTACTGCCGGATACCAAGATAGCTCCCCTTCTTCCTGCATCAATACAGCTCCCCTTCTTC
CCTGCATCAACACTTCTGATTTGATGCATATACTAATGTTGCTATGCAATCCCATTGTTT
GTCATCCAAACATTATTTTGTATTGAAATATCAGTATGATTCCGTGAGCCAATTCAGCTA
GCATCCAAACACCTAAATTCATATTCATGTTCATTACAATTTCCTAGCTAGAATGGAATT
GAAACTAATACAATACAGAGGTCTCCAATACACACATCCAAACACAACGTTAGGGAATTT
AGGTTTAATCTGAATTGGCTAAAGAATGGTAATTTCCTCCCACTTGTAGCTAAGATGTGG
TGTAAACATGTTAGGTTGGTACTTGTGAGATGCATTGGGTTTTTTTTCTAAAGAAGAAGG
GTGAATCAATATAGTAGCTATAAGTATTTCCCTCAGTTGAGAATCAAGGTTTATCGAACC
AATAAGAGAATCAAGGCAAATTCCCGTCGTCAGCAACTACACACACAAAATCAAACGCTT
GCACCCAATGTGGGTAAGAGGGTTGAGGCTTGTCAATCCCCTTGGACTCGTTACTTGCAA
GTATCTCTCCTTAATAATAAAGCATCTAATGCTTCTGTCGTCCATCTAGAAAAATACCCT
CAAAGTTGCTACAAATTACTAGCCATGCCAGCCGTAAGTCAAGGCAACGGTTCGTTTTTT
CAAAGTCGCGTCGTGCTAAGTTCTTTTACATGGCAATACTAATGAAAACCGTAGGTGTAT
GAGTAGTAGAGTGGCTAACGCCTAGCCCTTTCATCTTGGAGACTAGGGATCGACTGCCGG
ATGCTACTATTTTTCTCTTCCTTTT
