Map Locations of contig_6950 (5894 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_6950

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75935 3 1494 bp AK375083 Available Available None





CDS Structure of MLOC_75935






Contig Sequence (5894 bp)

>contig_6950 5894 assembly3_WGSMorex_rbca.fasta
TAGTTTACAGAGGGAGTACCATAGATGTTGATACATTTTTCTGTAATATTGGTCAAACGT
ATAAATGTTACTTCTGGAAAAAATAATACACCTTATATTTTGGACCGGAGGGAGCATTAA
ATAGAGACAAAAAACTGAAGAATGTAAATGTGGTATAGTACTAATAGTTCACTGCAAAGT
AAACTTTCATGCCAACAGTTATAAAGGAAAAATGGGTCGTACAGGCATGCTGGATGATTC
TCCGTGCTCCATCTCATCACCATGTGCTGTCCTGCTCACAGTAATTCTAGAAGGCACTGG
AAAATGCTCGATTTCATCCCCAGATCTCCCCTCTTTAGCTTTCTTCTTCTGCAATACTAA
TTTGGTAGGAAGAGGCTGCCAAATGGACAATAAAGTGTCACCCAAATGTGCAATGATAGC
ACATATCAGAATAAATAAAGTATAAACAAAGCAAGTTACCAAATATTTTGCATCATCATC
ATCAAATGAGACAAGGTAGGTCGTTGGATCTTGTTTGTCATCCCCCCTTACCTGAATCAC
AAAATAAGGTATGTAGGCAGTTTTACACCAGCAGAATGAAAAGTTACACACAATCGCAGA
CACGTTAGCAAAATGCCACATACTTCCCAGTGATATTCCCGAATCCAGGAGTACTGGAAG
TCTTCATTTTCATCATCCAAGTCCTTGACAAGCTAGACGAAACCATAGTCCCGATCAGAT
TATGATAATAACACCCCCCAAAAAATAACTGTGACTGGTGACATTTAAAAAAAAGATGTA
CTAGAGTCGAGAACAGGATGGATACCTCGTGGGGTGCTGGAGCCATATATGCCAGAAATT
TCTCTTGTTTTGCAGGGTCTGAACCACTGACTTGAAAACTTTTCATTAGAGCCTATCATG
AGAACACGAAAACCTCAGATGTACTTAATAATCGTGTAGGTGCAATGCACGTTAATATTC
AGGAGGATATTAATTGCATATTGATGTTAGTAAGATATCAATTGCATGTTGGCAGGATAT
CAATTGCGCGGCTGATTTTATAAGATGACTTCGAGTTTAAATGTATCTACAACCAGTGGC
AGTGGTGAGTAATTAGAGTTAAACGTGTTTGGTTCTCAACATTGGAGCGGTTTGAACCGC
TATATCTCATGATTTGATGGCTGAGATGGCTTGGATCTGCCCCTTTGGGTCTTTTTGAAT
TGGTATAGATGCGAGGGTATATCTCCGCAGAGCATCAGTGACGTATTAACATAACATCTG
GAAATATATGCATTTGACATTAACATGCAAGCAATATAAAATATCTGTTTCTACAATACA
TCCTTATGGGCATGTTAACGTAAATAACTAAATCAGAAAGCTCAAGGCAGAAAAAAAAAT
GTGACTCACCTGGGATTCGCATTCATCACGTACAGATCTCTCTAGCTTGTTGTACTGCTC
TGAATCAGCTGTAGGATCTCCATCAAAATTCACCATAACAAATGGATCATTATAACTACA
CAGGTCAACAGAAAAGCAAATTTCAGGCCTCCTTAGGTTTGTACGAATCTTGTAGGAATT
TCATAGGATATGATTTTCAAAGGAAAAATTCATATGGAGCCCTTTGGTTTGTAGGAATGG
ATTCCAATTCCTATGTAGGATAGGAACTAATCCTTCGCATTTCAAAGGAAAAAAAATGTT
AGCCTAGATTCAATGGAAAAATTCCTATCCAATGCATCAAATGACATGTCTTTCTCTATA
GTACTATCCTATGCATCAAATGACATGTCTTTCTCTATAGGAGTTGAGATGCATGTCATG
TCATCTCACTTCCTATGGTTTCCCTATTCCTATTGTATTCTTATCCTACGAACCAAAGGA
GGCCTGAGATTACATAAATTCATCCACCAGCTTATAGGACTCCAAAGGCAACACAAAAAT
CAAGGTGGTACCTTGAAGAGCAAAACAGAGGAAATTGTGGCATATACTGTTAGGGCTCCT
TTGATTCAAAGGAATTTCATAGGATTTTTGGAGGATTGAAATCCTTAGGAATTTTTCTTA
CATTGGTCCTTTCATTCATTGGATTGGATCCCATAGGAATTTTTCCTATGGGATCTTTTG
TACTACATTTCGGCCTCCTTTGGTTCATAGGATTTTTGTAGGAATTGTAAAGGATAGGAA
CTTTCTAGGAAAAAATCCTTTGAAGCCCTTTGGTTTGTAGGAATAGATTCTTATTCCTGT
GTAGGATAGGATTCAATCCTTCACATTTCAAAGGAAAAAAACATTAGCTAGACTCAATGG
AAAAATTCCTATCCTATGCATCAAATGGCCTGCCTTTCTCAATTGGAATTGAGATGCATG
TCATCTCATTTCCTACGATTTTCCTATTCCTATACTATTTCTATCCTATGAACCAAAGGA
GGCTGATTCATATGAAATCTAACATCCACTCCAACCTCTTCTTACAATTCCTTTGTTTTT
CATGTGATATCAAACACTCCTTGCTAATCCTATAGGGTTCAAATGGACATGCCACTCCAA
CCCTATACTTTTCCTATTGCTGCGTTTTTAAAATCCCGTGAATCAAAGAGGGCGAAGATC
ACTTTTCCAACAACAATAAATTTTGGAACACACTAACCTGAAATTTTATAGCTGACGGGA
AGTAAACAATTTTTTCATAACATAGATAGGAAAGTGAAGTGGCAACAAAACGTGCTTCAA
TGAACTGGCCGTGCTCAACACACATCAGATGTCAAAAATGAAGAACTAGGTCTTCTAAAA
TATAATGACAGACACAGAATAAAGTGTCATCTGAAAAGCCATACCTATCAAAATCGGGTA
CCAAAGGGAGAACAAACTCTGGTTCCATCCCTCGTTTAGTCTGGTGGACAGGGCGTGATT
TAGCGGCTTTGAAGGATTCGGCAATGGCTTTGATCCGCTTCTGTCTGATATATACACACA
CAGTAAAATAATGTCATTGGCCGCACCAGGATTGCAAAACAGGCGAACCTTCAGAAACCA
AAGAACAAACTAAGTAAAAGGAAACTCATACCTATCATTAAGATTTTCAAGGACATTATC
ACGACCCTCCCTTGATTCTCGCCTTTCTTTTGCTTGCTTTTCAGTGATCGACTGGAATGA
CCAAATTACTATTTTTAGTATATATGAAAGTAATCCAGCAGAATGCATGTAACTGTATTT
ATGGAAGAATCATCTGGCATTACCATTTTGGCTGCATCAGTACTAAGTGGAGAAATGTAC
TGTGTTTTGACCAGCCAAGACATGCCTTTGTCGGTTGGCCTCTCCTTTTTCCTTATACCT
TCTGGTTTAACAGGGGTGAGAACCTCATCATCACGCAGCAACTCTTCATCTTCTGGAGCC
AGGGGCAGCTGAACATTGGGAGGGCTAAATGCATGTTTGACACTCAAGTTAGGGATGCTA
GAAAGAGTCATCAGAAAGGTAGAAATATATGACTGGCTTAATTCTTACTTGTATACAGCC
ATATCAAGTAGGTCAAGAGGTATCCCGAGATCCTCGGGGACAATCATTTTAGGTAGATAG
TTTTTCTCCAATGATGAGATCCTGTATTTGGTATATCTGTGAAAGGGCAATATACAGAAA
AACATAAGTATAGCTGCCCCAAGAAACTGCAACATGCAGAATGAATTACAACCGAGAGAA
ACAGCAAGAACTAACTATTAGTGTAATAAGAAAGCATAGTATTTTTACTTATTTTGGAAC
GGAGGCATAAGCTTTGCCTTGTCTATTAATTAAAAGGAGAATAGAGTTTGTTTTTGTTAC
AACGGACCCTCATACATGACATGGTGATTACTCTCGCACTATGATTGCCCCAAGCTGTTT
GGCCTCAACCATACTCCAAAGTTTTGCTTCCTCTAAAATGGTATTAAGCAAGATCGTCGG
CGGGGCACTCTTGTGGCGGGAGAAGCGTGAGTTCCTCTCGTTCCAAATTGTCCATGTCAC
AAGCATTGTGAGAGAGGCCAGGGCCTTCCGGTTGGGCATGTTCGCGCTGGTCCTTTTATC
CCACCAATCCTTAAGGGAGCCCTCCAAGTGCCAAGAAGAGGCGTCCATGTGATCAAGCCC
TAACTTCATGATAACCAAGATATGATATCCTATAATGAACTTGGATAATTTTCTGTGAAA
TACTCCTCTATTAATCATGCATAAGTACAACAAATAATTGGATTAGGCTAACAAAGCAAC
ATGGTAAAAAAAATGCATTTTTGCCATGGAGGTTACATGGTGTGTTGTGGCTAGTTCATC
ATGGACCAGGGCAGGGCAATGACACCATAGAGGCAGGCACCCCACAGGGGCAAAGGGGAG
ATAGGCCAAGGAGCTTGGTATATTTTAGTACAAATAAATCTCCTTCCTACAAATTCAACT
GACATAGAGAAGGAGATCATAGTAGGATATCATATCAAGGGAGATAGGCCAAGGAGCTTG
GTATATTTTATCTCTTCATTCCCATGAAGCATGCAACAGCACATGTATACAAACAGATCT
CCTTCCTACAAATTCAACTGACATAGAGAAGGAGATCATACTAGGATATCATATCTTGAC
TAAGGATGACAATCAAGGATATCTCTAGAACAAACTTAAACCTGAGCAGCCGGTTGCTCT
CCTTGCGTGAGACAGTGCCACACGGTACTGTTCATGTGAAGAATACCCCTTCTATTGCTG
CACTCTTGAACTTATGCTTGAAATATGAACGAATGGCTGAAAATTTGGGACTGTTTCTAA
AAGCAAATGCATGTTATGGGACTGACAGCAAATATAAATACAAGCTTAGACCTGCTATAT
GCCATATGGTCAAACAGGTTGTCTCAGTAAAGAGAACGACCATTATACAATAATTAGCTA
GAAATTCATTTAATGCCTAAATAATAGCAGGTGGACGAAAAAAATCACAAATTTGAAATG
AACGATGTAATGTATTAGTAAAACTAGATAAGCAACATTGAAATTGCTTTCACTGCACCA
AACATAAGTAACAACAGAACAGAGCAATCTGATCAAAATAAGAGTAGAAAACTACCGGTC
CTTGTCCTTATTCAGAGGCAGCCATTTCAATTGAGCACTTGGATCTGGCAGTTCATTCCT
GAACCTGCATTAACAAGAAAAGAAGAGAAAAACAGGGTCATACAGTAGTTTAGTTCTGAA
CGACACAGACAAAAAAAGCATGCAAATCAGTTGCTCTTGCAAAACTTCTCCCAACATAAA
CCAATCTAGAAACATATTTTAGGCACACTTTTCAAAAGGAAGCTGCCAATTAATGGAGTG
ATGCTTTGAGAACCATTTTGCCTACCAGCGTGATCAAGTGCATGATAAGCATAATAATTT
TCTCAAGCACACATTTTACACTGAAGGGGCTCCAATTTCCTCCAACTAGCACTTGCATAG
ACCAAAAGTCCAAAATTTGCTAAACTCACTTGTGCTTGCAGAGGAACGTTGTCGGCTTCT
TGAGCCGATTCTCGAACCTCTCAGTGTTTGGTGCGGAGACTGGGCGAGACACAGTTGTCG
CCACCCGAGTCCCACCTGATGGCTGGAGGTGGCGGCTCTGCGGCTGTGGCTGCTGCTGCT
GTTGCGCGGCGCGCACCTGCTGTGTCTTCTGCAGAATGGTGGCCTGCGACTGGCGCATCA
TCTGCTGCTGCTTCCGGTCCTCCACCTTCTGCTTCTCATACTCGCGCTTCTTCCTTGCTC
GCCGCTCCTCCTCCGTCTCCACTCTTGGAAGTGCCGCCTTGGCCTGCTGCTCCTTTGGTG
GCGGCGGAGCTACCCGTGGGGGTGGCTGGGCAGGAGGTGGTGGCGGTGCCGAAGGTGGAG
CAGATATTGGTGGTGGTGGAGGGGGAGCTTGATTGTTGTTCCCGCCGTACGGACGCTGGG
GTGGTCGGGGGTGT