morexGenes - Barley RNA-seq Database

Contig contig_69336
Source Contig contig_69336
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_69336 (7609 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_69336

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75901	2	421 bp	None	Available	Available	None
MLOC_75900	1	771 bp	AK252222.1	Not available	Available	None
MLOC_75899	5	2151 bp	MLOC_75899.2	Available	Available	LOC_Os04g04010.1, FRAME:+3, EVALUE:1e-148, 13104.m00324 protein expressed protein
CDS Structure of MLOC_75901

CDS Structure of MLOC_75900

CDS Structure of MLOC_75899

Contig Sequence (7609 bp)

>contig_69336 7609 assembly3_WGSMorex_rbca.fasta
TAATTTTAGTTATTATAAAAGGTTTGCTTCTTTTCTAAATAGGTCAACGACATCTAGTTT
TCAGGAGACAACCAAAAGGGGTTGTCACATTGCAAAGCACATCAGGTTATTTGGGCCAAC
TTTTCATTCACCGCATTGCTATGCGACAGAATTAGGCAACTACTAGTAGAACATAATACA
ACCAATCTTTGTGCACCTTGTATGTTTCCTCGTAGACCGGCAGGTGGCGGAGCTCCTCGG
CGGACTCTCCCCAAGCCTCGATCAGCATAAGTGCCTTGTTCCTGTTATTCACAACGGTGA
TGGGATCATCCACCAACCTGACCATCTCATCGAGAACCCTCTCGGCGGCGACCTCGGAGA
ACACCTTGTCGCAGTTCTTGGTGACGGTCTCGAGGAGGGACAGGGAGAGGAGCTGAACCC
TTGCGTCCCTGAGCAGGAGGCGCTTCCTGATCCCGCGGACCAGATCGACGCTGCTCACCT
TGCCGGCGTTGATGAGGTCGCAGATGTCCAGGTTCATGGCCAAGTCGGGCCCCTGGAGGG
CCTCGGAGGTGGCGTCCTCGACGACCTTGTCGGCCGGGGTCTGGCCCTGGAAGAGCTCCC
TCATCTTGAAGCTCATGGAGGTCATGCCGGCCGTCATCTTCTTGCCCACCTCCGTCCCGG
TGATCTTGAGCTGCTCGCTCAGCGCCGTCACCTTGTCCATCAGGTTGTCGCCCATCCTCG
CTGCTGATTAAAACCACCTGAATCTCATCATTCAAATCAAAACAAGAAAAGAAAATTCAG
CGACGGCCATGGTATGATAACCAATGTCAAACTTGTGCAATCCCATGGCATGGCATGGCA
TGTCTGTAAAATATTTACACAAATCTGCATCGAACGAATGTGCCTAGGCGTTGACTGACG
GGGAAGGGGATCTCCGGCGGCTGGAGCTCGGTTCGGCGCGCGCGGCGGCGGCGGCGGCCG
GGTGAGGGAAGGGGAGAAAACGAATACAGAGGTGGGAGGAGTGGGGGGAGAGCTCACCGC
GGCGGATTCCGGCGAAGGGGGTAGCAGAGGAGATCTGGCGGGCGGCGGCGGAGAGGAAGA
GAAGCAGAGTCAGCGGCGGGGCGGCGGCTGGTTTCCCTGTTCTGCTCACTCCCACTCTCT
CACGAGGGCCGTTTTGGACCGCGTCAACAGTTACAATTTTTTTTATTTTTAAAAAGACCA
AGAGACTTGCATTGGCACGTGCCTGCCTTAGGCACTAATTTAGCTATGTTTTATCTGTAT
GTTTTATTACCGAGTGTACATAGAAACAAAGAATTATATTAAGTATTGCCCCAAGAAGAT
CAATTACAAAGATACAGCCAATTTTTTCCATTTAAGATAGTACTGGACAATTGATGTTTT
TGGTAGAACATGAGGTGGATTTATTGCTTTGCAATTCACTTTCAAGGCAGTGTTGACACG
GACACACCGAGGAAAAGGAGCTTAGTTGCTCTCAAGGGCGGTATCGGTGAACTCTAGTCG
TCGCCCAACCCCTTTCCTTCCTACTATCCCGCTCTAGTTTTGTTGAATTAGGCCGGCTGA
CGAACCCGTTTTGATGGACAACATGGACGCTCTTTCTGTTGTGGCGTGTCACCCCGACAC
ATGTGGAAAACATGCTAAGCGAGGTTGTGTCCTTGCTAAGTAGCTCATCATGAAGGCCGA
GTATGGAGGTTTCAGTAACTCAGAACTCAAAATTTAACTCATAAAGAACTTCTATGTGGT
GGTGTCGGGTGCCCGCCGCTATCGTCGTAATAGTGGTCATCGTGGCCCTATAGCCATTCC
CCCACCTACTACCCACTAGCCAATGGCCTCGCCTCCTTAGTCCCTCGTCATCCATATTGA
TTGTGGCAGCTCGTCACATCTGGACCTCTTTCAGGGTCCGGGTCAAGGCCGCGTTCCGAC
CATAAAAAGAGGAGACGCGCTCCGCACCGCACGATCGAGCGAGATCAAACGGTGTCGAAC
GCATCAACGGTTTTAACTGACAGAGTTATATCGTTTTCTATTTTTGGCCGAAGTTTGTCA
GCAGGGTGCCGATTTCCTCCCCGCCGAATCGCAAAATTCCAGATCCGCCCCTTAACCTTT
TTTTTTTCTTCCCTTCCCATAAACCCCACGTCAACGGAAGAGGTGCACATCACACATACA
AACTTGCACGCATTCATGATGGCCTTTTTTCAATGCAATCCATCCACATCCATCCACCCA
AACAAACAAAGATGACATACAAAGTTGGAGGTTTTCGAAGGGTTCAAAGATAAAAATCGT
AGCTTTTCCTAGACAACAAAAACCGCCGTCTGCCGGAGACAACCCAAGCAAAGGAAAGAC
GGGGCCTTTCACTCCTCTTCCTCCCCCTCTCCCTCCCCAGAGTCGTCCTGAGTCCTGACC
TACCCAAACCTCCAATCCGGCCGCCGCGGCGTGGCTCATAGCCTCGCCGCCGGCCCCTCC
TCCCCACGCCCGCGTCGCCGTCCCCGTCCTAACCCCCACCGCCGTCTCCGGCCGCAGCCT
TGGGCGGTTACTATTTGAGGTATGGCCTCCTGGCTGTCCGGCGGTTGCTTAATCCCGAAC
TAAACCGGCGCAAATCGGCGCACGGCGTCCAGATCCGGCCGTGGATCTGGGCGATTCCGT
GGCCGCCATGGCCTTGGAATCGCCGCCTCGTTCTCCCCGGGATAAGGTTGGGGATTTTTT
TTGGTAGCATAGGATGAGAGTCGCATTAAGGTGTTAGGGTTCCATGGACCTAGATAGATC
GGGGGTGTTCTTGTTGTTGGATCATCCCCGTGTGCTTACTAAAAGTGGTAAACGAAGCAG
CCCGCTGCGCAGCCATTTGCTGGAAGTTGAAGAAAATATATCTGGCACTTTACAAGGGCA
TTAGCTTGAATAAAATGTGTCTTTCTGGGATGCCGATTAGCGGGAAAGCCATGCGAGATT
TAGGTTTTTTTTTAGCATCTGTAAACAATGGATGACAAACCTTTTTCATTGTGTGATGCA
AATGCAGGATCGGCACCTGAGTCTCTGAGTTGAGCGCCTTCCGCAAAGGTTTCGGTGAGC
CGGATTGCCTGTTTGGGTGTTCCTCAAGGTTGAGCTCAGGTGACAACTTTAAAATGAATG
AATGAATTGTATACTGCTGTTGTGCGTGTTAAATGAGATCAGTAATGCCATGAGCACAGC
TTCGATCATGATTACTGCTAGTTTGAAGTGAGAATGCATCGTAGGTCTCAACTAGCTTGT
CCCGGTGGATGCAAAGGATCATGCCGCGCTGCATAATGTGATTGGGTAGCACTAGGGATA
GTTCTGCATTATTGTATTGCAATGATGCAACGTATTTATCGTATGTCTTGAATCATTTTA
CCGGTACTTCAGCCCCTTGATCTGTCCACGGGGTCAAAAAATTTAAGCAGGTGACGGTAC
ATCATACAGGCTGTGCTTGATGTGAATAGGAGATAGTACTTACTAGTCTTAGTACAAATG
CTATGGATCTGTTGAGAAAGCTAGCATTGGTGTGTGGGTGATTAGGGAAACATGTTTGTT
GAGAATGCTTACTTTGTTGTGTGAACTGTAAGCATGGGTCTCGGCCGAATCAGTTTCTTT
ACGCCGCTGGTGAACGATGTAGTATTCCATTCACTATTGCAAAATAATATAAAGAATGCT
ATTATGTTATTTCAGCAAAGGAAAGATGTTATTTAGGTTTTTTAAGGTAGACATGCTGTA
TATAGCTAATATTATCTAGATCGATTGTCCTAGTATTGCACATGGATATCTTTTATAACT
TTCTGATGATATAAGTTATAATTTACTGCTAGTATTTTAAGGTGAACTGAATCTTATCAA
CGGTTTCCTTTACTTATTTGATTGAAGAGCATGCAACGAGTTACTAAGGGGCAGCCCGGT
GCATGTAGCTCCCGCTTGCGCAGGGTTCGGGGAAGGGTCCGACCACTTTGGGTCTATTGT
ACGCAGCCTTTCCCTACATTTNTGCAAGAGGCTGTTTCCAGGACTTGAACCCGTGACCTC
ATGAACGAGTTACTAAAACGAGGATAAATAAGTAGAGATAACATGATTGCAATTACACAT
ATTGATCCCGCTCTGGGTGCATATGTATTTTGCGCTACCACTTCATCAAACCAGGACATA
TATTGAACCGGAGCACCTAATTATACAGGTCTTGGACATAACAGGGGGCTAGTATATATC
AAATCATCTAGTCTCTTGTATTAATCTTGTCAGTTCTTGTTAGAGTTGATTCCACCGCTC
TGGTTGAAGTAATATGAATGCTGTTGGTTGAACATATGAATCAATTGGATAGTTAGATTC
AATATCTGCAAGGAGCAAATCAATTATCTTAATTGAAATCTTAAGTGTACCTAAGTTCCA
TTTATAACTTGGATTCCATTGACTGAAGCTCAAATTTGTTAGTTTATGTATGTGTGGATG
AACACAAAACATACAAATTAATTTGTACCTTCACCGTTGAAGCTGGTTACATAAGTTCTT
TTTTTTTTCTTTGCCTGCCTTTCTGATTTCAACATTTTCTGATAATTGTGTATACATCTC
GAATTATCTTTACTCAGTGAAGCTGTAATCATTGCTATATATGTTTCAATGTTAATTGAT
TAGTTATGTTGTTCTAATTGGTCCCAGAACAGCTTGTCCAAGATGCCAAATCCAGAGAAG
AAGTTGTTCAGGATGCCAAGTGCAGATGCCGAGATTGCTGCACTGCACAAGGAATGGGAT
GATGCTCGGTGTCCAATTTGCATGGACCATCCTCACAATGCTGTACTTCTGTTGTGTAGT
TCTCATGACAAAGGATGCAGATCCTACATATGTGATACAAGCTATAGACACTCAAATTGC
CTAGACAGGTTCAGGAAAATGAAAGCGAACTGCATGGACAGTTCATCACAGCCAAGCTCT
TCCTTGCCTGGAGATACAAGTAACCAAAGTGTTTCACAGAGATCCCGTCTCAGTCCCAGT
AGAGGGAGCCCCAGGCTATTGATAGATGTACCAGAATTCCGTGAAAATCTCAGTCATGAA
CATGTCATTCGTAGTTCTGCAGCCGTATCTGGACAACAAGAAGGAACTAACTATAATCAA
GGTCCAGTAACATTGGAAGCTCTTATGGGACAAGTGAGTGGGCAAGTGGAGTCAGCTGAG
GTATCCAACTTGAACCAATTGATGTGCCCGCTGTGTAGGGGTGCTGTGAAGGGCTGGGAG
ATCATCAAAGATGCCAGACAGTACCTGGACGAGAAGCCAAGAAGCTGCTCGCGGGAAGCA
TGCGCATTTTCTGGTACCTACGGTGCGCTCCGTAGACATGCCAGGCGGGTGCACCCCACA
ACAAGGCCTGCTGATGTGGATCCGTCAAGGCGTCGCGCGTGGCACCGCCTGGAGAACCAG
CGGGAGTATGGTGACATAATGAGTGCAATCAGGTCGGCTATGCCTGGGTCAGTTGTGTTT
GGAGATTACGTCATTGAAGGTGGTGATACGCCATCACACGAGCGTGAAGACAGTGGGCCA
AGTGACCGAAGCGGGTCTCTGTTGACAACGTTCTTTCTGTTCCATATGATGAACAGTGGT
CCGCTGAGAGGAGACGAGCCAAGAGGCTCATCAAGGGCCCTGAGAAGGCAGAGGCGTCGC
TATCTGTGGGGAGAGAACTTGCTAGGCCTCCAATATGATGAGGACGATGATGATGAGGAC
GAGGATAGCCTAGAGGAGGAGGTTCAGAGGCCAAGGACTCGCCGGAGGTTCGTGAGGTCG
AGGTCGGAGGAGCGACGCTGACGCATGGGCGACCATGGTAATTACATCCTTCACACACCG
TGAAGTTCTCCACCCCATGAATTAGCGATGACTCCTTGCATCATCTTTTGCCATGCCAGC
CGGGGCGCTGGGTGACATGCTGCTTCAGTCAAATGCCTAAAGTGCAGCAGGGATCCCCGC
ACTGGAAGATCCAAGTCAACCGTGTCGCGTTTAAAGGGTTGGATAGTTGAACAGCGTTCA
ACCCCATCGTATTCACAAGACATGCCCATCCTCAGGGCATGCTGGGATGCGGGCTCGCTC
GCTCTTGCTCATGATGCACCTCGCGTTCTTTGCTCGGCATGTTATCTGTATCCGAATCTA
TTGTATATATAGTGTTGGAAGCTAGTACCATTTACCGAATTCATGTGTGTACTCTTTTGC
ACCTGGTATCTTTGTTCAATTGAAGCCGGTAGGGATTACAATTGGCCTTGATGCTTCATG
TGTTATGCTGGTTGTTCCGTTGTTGCGCGGCATATGCTCCTGTTTAATCTTTGAGTGCTT
GGAGGCGTTGGCTGATGGTTGTCTCTTCTCATTCTATGAAAAGATGGAACCCTTGAAGGA
TTATGCTCTGCCTTTTATGTTTAATTTTTTTGCCTATTTGAAAAATGGAGGTCGATGTCC
CTGCTCTGGCCTCTGCAAATATACTCTCCGTTTCAAAATATTTAACGTTTCAGCTTTGTC
CTGAGTCAGTCTCCTTTAAATTTGATCAACTTTATGGTAAATATGAACATGTACGACACC
AAATTAATTTCACTAGATTCATCATCTTATATATATTTCGTGTTATAGATATTAGCATTT
TTTTTCTATAATCTTGATCAAACTTGAAAAGAGTCTACAACTTCAAATACTTTGGAATGG
AGGGAGTATACCCCTCTCGGAATAGAAGACCCAGATGCATTTTTAGATCATTAGTTTGAT
CAACAAAATCTGAATTATGTATTTATAAATGGTACACCATCAAAACAAAAATATGAATTC
AGCTATATACCTTTTACCCGATATACTATAGTACTCGTATAGTATACACTAAGACAAATC
ATTGGTTCACAGAACATTTCTTTTATACTCTCTCGGTTTCTTTTTACTCCGCATATAAGA
TTTGGTTAAAGTCAAACGACATAAAATTTAACCAAATTTATATAAAAAAATATGAATATC
TACTATATTAAAATTATATAATATGAAAATACATCTTGCGGTATATCTGATAATACTGAT
TTCATGTTATGAATGTTGATATTTTTTAATATAAAGTTAGTTAAACTTTACAAAGCTTGA
CTTTGACCAAACCTTATATGCAGACTAAAAAGAAACGGAGGAAGTACCAAAATGTAGTCA
ATGATATCTTCTACTACCTCCATCCCAAAATTCTTATGTTAGATTTGTTAAGATACAAAT
GTATCTAATACTAAAACGTGACTAGGTACATCCATACTTTGGTAAATTTAAGACAAAATT
TTTGAGAAGAAGGGAGTATTTTGTAAAGAAAGTGAGTAACATCTTTGATTTTTTTAGCTT
GATTTAATCATAGGACATTTGGTTATTTTGTAAAATTTTGCACATTCTTTGTCGATTCAA
TTTGCGTATTATCTATATTTTCTCTTGGTAAGACATCACAAGGAAAATAAGCTCACAAAA
AAATACAGGTTCAATTATATACCTTTTACACAATATAATATAATACTCCTATAATATACT
TCCTCCGTTCCTAAATATAAGTCCTTTTAGAAATTTTACTAGAAGACTACATANNNNNNN
NNNTGAGTGAATCTACACTCTAAACTATGTCTATATATATCCGTATGTA