morexGenes - Barley RNA-seq Database

Contig contig_6913
Source Contig contig_6913
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_6913 (9384 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location
Predicted Genes from contig_6913

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75846	5	3497 bp	MLOC_75846.4	Available	Available	LOC_Os04g56160.1, FRAME:+2, EVALUE:0.0, 13104.m05840 protein plasma membrane ATPase, putative, expressed
CDS Structure of MLOC_75846

Contig Sequence (9384 bp)

>contig_6913 9384 assembly3_WGSMorex_rbca.fasta
CAGCAGCGCGGCCTCCCCGCGTTGTTGCGTGGCAGCGCTGGGCCTCCGGGTTCGCCTGTA
GACTCCGCCCGCTCCCCTCCCGTGCTGGTTCCGCGCCCGACCGCCCCCCGCCGTCAGCCA
TGGGCGGCCTCGAGGAGATCAGGAACGAGGCCGTCGATCTGGTGAGAACCGCCCCCGCTT
CCCCCACCCCTCTCTCTTCCGACGCCCTGTTTCTCGCGGTGATGCTTGGTTCTCGCTCTA
CGCCATGCTCGTCTCGTACTGCTGTCCCCCGCTGCTTCGATCTCTGGGTAGATAGATGGG
GTTGAGACTCGCACGAACTGCGACAGATTAATCTGCTGGCCGTTTTACCTGCTGTTCTTC
TTCTCTGTCGGGGAATCTCTGGCAGGGACGAAAGCTTCCGCACGAATTCGTGTAGCTTTA
AATTTTTTCTCTCTCAAAAAGTTTAACTGGTTACTTTTTTGGTGAAATGAAAAGGAATTA
AAGGATTTCCTTGAAAGCAAACTTTCCATGTGCGGCTGTATCTTCGCCATGTGAGTGCTC
AGCGGCTCTTCAATGATGGAGAGGACCAGCTGTCCATGGCCGGCATGTAGCACAGGAACA
GCACAGACACCCCATGTTTCTACCTCTGCTTTGCTTCCGCTATGCTGCGGCAGCGTGCAT
CCCCGAAACGCACAGCGTTCGGCGGAGGAATTTTTGGATCCTTCCCAGCTGTTTCACTCT
GCCGTATTTAATACGTAAATCTCCTCCTCCGTGGAACGGGATACGAGCACCGAATCTTAG
ATCTGCGCGTAATTTCTTCCTTCCAGTTTTTATTTCGTCCACAAATAAATGATTACCAAA
AATGAAAAATAAATGGAGATTTTCGAATAGTGGTAGTGGTAGTAGTAGAATTAGTGGGAC
GGGAGTACGGATTCGGGCTTAAAGTCAAAAGATGGTTAAGCACGGGCCGGACTCCCTGAT
CATGCGGCGCCGGATTAGTGGCCAACCACCACAAAGCACGGAGAAATCCGTGCCTTCGAG
CCGTTGCCTTTTCGTTTTTCTATCTTTGTTGACCGAAGCGCGCACCCCAATCCAGAAGCG
GAGCCGTCGCTCGCTCTCGCTTATCCTATTGTTTTTTTCGCCTTCACATGCGCCACGGGT
TCTGCATCTTGGCCGCACGCATCTCGAGGCGGCCTTCTGGGAGATGAAAACGTACGCACC
CCGGCACGTGGGGCTGTGGGGGAAGTACGCACCCAGCCAGGCACGTACGGCCCAGGACAC
CCTGTCCTTGGCCGGCTTGAGCCGTCTGATGGAGATCAGACGGCCGTACGGGTCCCAATC
ATTGGACCCACCCCACCTTCGATGATAGATGCCCGCTTGGACTCTCCCATGTTCGATGTG
CCGGCCCCGGATTTGTCTGGTAGAGGCTGACCGATGGGTCCCATGCCATGGAAACTACTG
TTCTGTACAACGAGCTGTTTGAATTGTCTGTTCTAGCTGTCGCTGACTGAGTGGGGTCGC
ACTTCATATCATCGATAGATCTTTTCTCATCAATGGTTTGTTTCCCTTGTGTTTGTGTTT
GCAGGAGAACATCCCCATCGAGGAGGTGTTCGAGCAGCTGAAGTGCACGCGCCAGGGGCT
CACCTCCGATGAGGGGGCACAGCGTGTTGAAATCTTCGGCCTCAACAAGCTCGAAGAGAA
GAAGGTGAGCATCGTTACTTTTGGTTTCTGATGCAAGTTTGGTTCGTGTGTTCTTGCATC
GTATTGATTGCTTCCTTGTGGGTCTCGTTTTGCAGGAGAGCAAAGTCCTCAAGTTCCTGG
GATTCATGTGGAACCCGCTGTCCTGGGTCATGGAGATGGCCGCCATCATGGCCATTGCAC
TGGCCAACGGTGGTGGGAAGCCTCCGGATTGGCAGGATTTTGTTGGTATCATCGTTCTTC
TGGTCATCAACTCCACCATCTCCTTCATCGAAGAGAACAATGCCGGCAACGCCGCTGCTG
CTCTCATGGCCAACCTTGCACCCAAGACAAAGGTGAGCTCGGCACAGAATGCTGCACTGT
TAGGTTGATTTTGTTTCTATAGTACTGTGGCCATACTATTTTGGAATCATTTCTTGTGCT
TGCTTTTAACTGTGTGCATGTATGCCAGCATCACGTAAAATTTATTAAAATTGTTTGTTG
AGCCTGGCTTAGCAATTGCAATTTAGTTGGACATAATTATTATAACTGTATAATACTTTT
GTTCTGGAACCAAAAGTCATACTCCAGTTTTTTCCTTAAGCTAGGTACCTCTCAGCCATG
TATAACATTTGGCAGTTGGAAACTGCTGCATTTATTTTAATGCAGTTGTGTTTGTTGGTT
TGCCTTTTGTAACATGTAATACTGTTTCTTATTCCAGGTCCTCAGGGATGGTCGATGGGG
CGAGCAGGAGGCATCAATCCTGGTTCCTGGTGACATTGTCAGCATCAAGCTTGGTGACAT
CGTCCCTGCTGATGCTCGTCTCCTTGAGGGTGATCCTTTGAAGATTGATCAGTCTGGGCT
TACCGGAGAGTCTCTCCCAGTGACCAAGAACCCTGGGGATGAGGTCTTTTCTGGATCAAC
CTGCAAGCAGGGTGAGATTGAGGCTGTGGTCATTGCCACAGGAGTACACACTTTCTTTGG
CAAGGCTGCTCATCTCGTTGACAGCACCAACCAAGTCGGGCACTTCCAGCAGGTCCTCAC
TGCAATTGGAAACTTCTGTATCATCTCGATCGCGGTGGGAATTGTCATTGAGATCATCGT
CATGTTCCCGATCCAGCGCCGCAAGTACCGTGCCGGTATTGAGAACCTGTTGGTCCTCTT
GATCGGTGGTATCCCGATTGCCATGCCTACAGTTTTGTCGGTCACCATGGCCATTGGTTC
TCACAAGTTGTCCCAGCAGGGTGCTATCACCAAGAGGATGACTGCCATTGAAGAGTTGGC
TGGCATGGATGTGCTTTGCAGTGATAAGACTGGCACACTCACCCTTAACAAGCTCAGTGT
TGACAAGAACCTGGTTGAGGTGTTTGCGAAGGGTGTCGACAAAGAACATGTGTTGTTGTT
GGCTGCAAGGGCATCGAGGGTTGAAAACCAGGATGCCATTGATGCTTGCATGGTTGGTAT
GCTTGCTGATCCGAAGGAGGCAAGAGCTGGCATCAGGGAAGTGCACTTCTTGCCCTTCAA
CCCTACTGACAAGAGGACTGCTCTGACTTACATTGATGCTGAGGGTAACTGGCACCGTGC
CAGCAAGGGTGCTCCTGAGCAGGTTGGTAAAACTATAGAAGTGCAGTGATGTTTCATTAC
ATGTTTGACATTGTAGTTAATTACATCGTTCTTTAACGTGACTAATGAAGGCTTGTTATG
AAACTTGAACAGATCATTACCCTGTGCAACTGCAAGGAGGATGTGAAGAGGAAGGTGCAC
TCTGTGATTGAGAAGTACGCTGAGCGTGGGCTTCGTTCGCTTGCTGTTGCAAGACAGGTA
CCTTAACTTCTGTATTTCAAATGCTATCTTGGTTATAGCGGCTGGAGGGTCAATTTCTAA
TGCCAAGTGACGCTATCACAGGAAGTACCTGAGAAATCCAAGGATTCTGCTGGTGGACCA
TGGCAATTCATTGGTCTGTTGCCCCTGTTTGATCCCCCAAGGCATGACAGTGCCGAGACC
ATCCGCAAGGCACTTGTTCTTGGTGTCAACGTTAAGATGATCACAGGTACATACACTTTC
ATACCAATTTTTAACTTCTAAGTTTGCATGTTTAGTGTAAATGTAGCTAAAGAGAGTTAT
GTGATTTACTATAGGTGACCAACTTGCTATTGGAAAGGAGACGGGTAGGAGACTTGGGAT
GGGCACAAACATGTATCCTTCTTCTGCATTGCTTGGCCAAAGCAAGGATGGTTCACTTGA
GTCACTCCCCGTCGATGAGCTGATTGAGAAGGCTGATGGATTTGCCGGGGTCTTCCCTGG
TATGCTCCATTGCATGCTTATGTGTTTAGTTATGCAATGATGCATTTGCTAACCGGGTTC
GTGTTATTCAGAGCACAAGTATGAGATCGTCAAGAGGCTGCAAGAGAAGAAGCACATTGT
TGGTATGACTGGAGATGGTGTCAATGACGCTCCTGCTCTTAAGAAGGCCGACATTGGTAT
TGCTGTTGATGATGCTACAGATGCTGCTCGAAGTGCTTCCGACATCGTGCTTACCGAGCC
AGGTCTTAGTGTCATTATCAGTGCTGTCCTGACCAGCAGATGCATTTTCCAAAGGATGAA
GAACTACACAGTGAGTCTTTTTTCTAAGTTGATCATTGGTAACCTTCTAAGCAGATGATC
ACATCACATTCAGACTCATTGCTCTTTTTTATCATGTGTTGCACCAGATCTACGCAGTTT
CCATCACCATCCGTATTGTGGTAAGTACCTCAATTCCCCAAATATATTTTCCCCATTGAA
ATTTAAGTGATATTTCTCCAAACTAATATCACTTCCATTTTGCAGCTTGGCTTTTTGCTT
ATTGCCTTGATCTGGAAATTTGATTTCGCTCCCTTCATGGTCCTTATCATTGCCATTCTC
AATGATGGTATGTTTTTTTTGGTTTCCCGTTAGTAGCCATGCTCATGTCAGCATCACTTC
TCATATTCATATGAAAAATTGCAGGCACTATCATGACAATATCCAAGGACAGAGTTAAGC
CATCTCCCTTACCCGACAGCTGGAAGCTCAATGAAATCTTCGCCACTGGTGTTGTGCTCG
GAACCTACCTTGCTCTGATGACAGTGGTCTTCTTCTGGATCATCCACAGGACCGACTTCT
TCACAGTGAGTTCTCATTTTTTAAAGAATATGATTATAACTTCGCATTGAAACTGCTGGT
AGGAAAAATTCAGTGGGATGTTCTTTCTCACTTAAGTTCCTTTGTGCAGAACAAATTCGG
TGTCAGGTCAATCAGGGAAAATGAAACTGAGAAGATGTCTGCACTGTACCTCCAAGTCAG
TATTGTGAGCCAGGCTCTTATCTTTGTGACTCGTTCTCGCAGCTGGTCCTTTGTTGAGCG
CCCTGGTTTCCTCTTGGTTATCGCCTTCCTTCTCGCGCAATTGGTACGTGCAAAACAGTT
GCTCAGCAAAGTAACAAATTCAGGGCAATCCGATCCTTTGGTGACTCAACCTGAATTCTT
GATGTAGGTTGCGACACTCATTGCTGTGTATGCCAACTGGGGATTTGCAAGGATCAGTGG
AATCGGGTGGGGCTGGGCTGGTGTTATCTGGCTCTTCAGCATTGTGTTCTACTTCCCACT
TGACATTTTCAAGTTCTTCATCCGATTTGTGCTGAGTGGCAGGGCCTGGGACAACCTCCT
GCAGAACAAGGTACTACAACGTAGAACCATATTTCTCTGTCAGCACCTTTATTTTTAGGT
GCACATACGCTGCGGTTTGCCTTGTGGAGCAAGTTCATGACCCTCTGATCCTTGGTTGTG
CAGACTGCTTTCACCACCAAAGAGAACTACGGCAAAGGTGAGAGGGAGGCACAGTGGGCT
ACCGCACAGAGAACACTCCATGGCCTTCAAGCACCTGAGCCGGCTTCCCACACACTCTTC
AACGACAAGAGCAGCTACCGTGAGCTTTCTGAGATCGCTGAGCAAGCCAAGAGAAGAGCT
GAGATTGCAAGGTATATATACGTTTACGCTTACAAGTAGTTGCTAAAAGATGAGATGCTA
GTCGTTGATCGCTAACGCACTTTCCTGATGGCTATCTGCAGGTTGAGGGAGCTCAACACA
CTCAAGGGGCACGTTGAGTCCGTGGTGAAGCTCAAGGGCCTTGACATCGACACCATCAAC
CAAAACTACACCGTGTGAGGAATTTGGGCATTGGACCAAACAACATGACATCCGTATTGG
AGCGAGATTGGAATGGAGCTCCGCTTTAAGATTTTTCCGGTGCATGAATGAAAGAAACAT
GGCTGATCTGACCAGCCCCTAGTTGTAAAGTGCTACCAAATATATGGTTTCGGTTGTCCC
GTCTTCTAGAGAGGTTTTAATGTTCTAGTGGAGTTATACCGTGTTTGGAGCACGGCGTGG
TGTAATCGTTTTACCCTTTCCCCTAACTAGTCGGTGATCTTGCGGAAGCAAGACGAGAAA
TAATCACTGCAAATTTTCTGCCACTTGCTTGCTATCCCTTGGGTTTTATACAAAAGACAA
TTCTCGCCAATATATATATCATAGCTTTTCTGCCATGGAATTCCAAAGTGTCTTTTTTAT
CGCACTGAAGTACACTATCATTGCCAGTGGACTGGCTTCTTTGCAGCACAATTTGGCGAT
TGAACTGTTTATGTAATCAACAACGTTGTATATAGTTGGGAATGGTGAACGCGAAGTTGA
AGAAACCCAAGACATATAGAATGAGAAGGTAGTTGGTAGCGACTATTCTTGGACCGAAAA
CCCCAAGAGACACGGAGTAATGGGTACCACGCTGGTCGAAGAAATCCAAAAGAATTGGGC
AGATGTTCGGCAATCATGTTTGGGGATTCTATACGCCACAGACGAGGACAGCGGTACGAA
CGAACTCCATCTCATCCCCCGAACAAAGCGGGCGAAAAGCGAGTTGTACAGTAGATAAAT
TGTTCCTTCCAAGGAGAGCTAGCCGCCGTGCCGTCCTCCTCACAAAATGCTTGGAAGCAA
TAATACTGACAGCTCCTCTTCCTGCCTCCTCCACACACTCGTACACAATACTACTACAGT
ACTCTACGTCGCAAAGGAGGGGAATCTTTCCGAGGACGAATCCTACCCACCACCATTTCG
CAAAGAGATAGAGTCGAACCTGTTCACTGCTCCCACTGTAGCCGTTGCACTCCGCCCTTT
GGCTTTCTTTCCCCTGCTCGCTCGCTCGCTCGCTTTCGGAACCGGATCCAAAGTCCGATC
GCCCGTACGCGCACGACGTCTACCGGAGAGCACGCGCGCTTGCGACGGCGCCGGCCTAGA
TTAGACCTCAGAGGCAGCGGCCACCGAACCGTAGTACACCAGTCAGTCCTCAGCCTTCTT
CAGAAACTGTGCAGCAGCAGCAGAGCAGTGAGCTCTGGCGACTGGCGGTACCGCAACAGT
GACGCCCCAGCCGCCTCTCCGTGGGCGTGTGGGCGTGTGGCCGTCGGGTTGCCATCGTAT
CCCCGACGCGATATCCTCCCCTTCCTCCCCGTCCTCCCCGCGCCACCGATAGTGCGCGTC
GCTGCTGGCCGTCCTTGGCGGTAGGCGCAGGCATCATAGGCCGCGTTCCTTCCCCCACCC
CCACAAGGAAAAAAAAGGCGGATTCCCGATCCCGTTCCTGTTGCTCCTCCCGCGCTGCAG
TCGAGCTCGTCCGCTCGCCCAAAGTGGCCGGTCGCATCGTATTATTGCGCGCCCACACCG
CACCGCACCACACCACACGGGCCTGTCGCCTCCCCCTCAATCATCGCTCCATCCTGTTCC
CGTTGCCGGTGCCGTCCGATCGCTTTCCGCTTTGTTACAACTTACAACGTCGAGAGAGAA
CAGAAACAGATGGCCTGCCGGTGCCGGTCACCTCGCGCGTCACGTCCTCTCACCGCCACA
ACCCCATTGCCTTTGCTAGTTCGTACCGCAAGATGGTATGCCGGTCCATGGCTGGCCTGG
ATTTCGAGTTCACGCTTCTAGCGAACTTCTAGAGCGGTGAGGTGTCGTTAAGTCGTCGTT
TGCTTTGCCCCCGGCCTCAACGGTGCTTGTTTAGTCACCACTCTGATCTCCGGTCAGTGA
AGGAACGACACAACACAACGACCTCGTGACCGTCACGACACGTCGCCGGGACATTGACGG
ACGGCGTTGGCGCCACGACCAACCACCGTACCGGACCAGATCAGCTCTCGTGAATCCGCG
TCCTTTCTTTTGGCAAAAAGCGTGCGTCTGTGAGTGAGTGCCATGCTAACATTGTTAAGA
TTTTCCTGATGGGGTGTCGCCCTTTTGACGAGGTGACCGGCGTGGCTTAAAACTAAAAGA
GGGGGCAGCCGTAGCCGCGTCCGTGCGCAGGATAAGAAAGCAGGAATGCTCATCAAGATA
TGCGGGGTAAGGGGTAGCACTAGCTGGGAATGAATGATGGCCGGTTCTCGAGATCAGATT
AAGCGAAAGCAGGTGTGCATTATTGGAACTGTCCGGCCAGTGCAGGCGGGGAGGGACAGG
GACGTGTTGGCTAAGGTCAGGATCTGCATGATCTTTGTTTGATCAAGCGAGTGGACGAGC
TCCGGCGACCGACCGGGCATCTCGTTCCCGTCCAGCGTCGCGGCCAAGCTTGGCTGCTAG
TGCCGGCGCCCCGGTGGCCCGTGATGCCGGCCGGTTCTACGATGCATGGTGGGCGATGTG
TACGTGAGAAGCTTCCCGTCGCTTGTGCGTGTGCGTGGTCGTGTGGAGTAGAGCCTTGCT
ACGACTACGGGGATGTATACGAATACGATCCCACGGGGCCTGCTTGCGATTCCAAAGCAG
GAATCGGACGGGTGTGTGCCCTTCCCTTTTTCCTTTTCTTCATTGCTGGGAGCAGAAAAT
ATCTATTCTTTTTTTTTTGAAACAGAAAATATCTATTCTTTGACATGAGCAAAGGTGCAG
AAAAAGAAAAGGTGAGCTCGGGCACCATCTTTCGTTCTGCCTGCGCGGCCAGTAAATGGG
GCAAAATCTTAAGCTAGTACTCTAGGCAGCTAACTAACATCAGCATAGTCCATACCAAAA
TGCAGCAACTGAATGTCAGAGACTTTGCATAACAACCATCTTTCATTCTGCCCAATCAAT
TACATTTTGAGTCTTGCTTCGGTACACCATAGTCATTTTATGATAAGAGCATCTACAACC
GGACCTTGCAAATCCGGTCCCTCAAACGCCCGTCAGCGCAGCTAAATTTCTTATTTTCTT
TCTCATATGTTTGGTCACTTACACATGACTGATGGAAAGGAAGAGAGATAAAAAAAGGAT
AAAAAAAGAAAAAGGTGGTCCGGGTGGGGTCGTGTCCTATGTGGCAGACTGACCGGACGC
GACCGCGAGCCCTCATATCCTTTTCTTATTTGATATGGATAGGAGGGTTTGCAAACATCC
CAGACATATAGAGACGGTATGAGGGGTCCGGTTGGGTCACTTTTTTCCTACTCTTTCCTG
TCCGGTCACTGACCGGGCGCGTCCATGGACATATGAAGGATCATTTGAGGGGTTCGGCTG
TAGATGCTCTAAGATGATGCGATTCGAACACAAAACCTAGTGTTTGTAAGGATAACCGCT
ACCGCTAAAAAGTTATTGCGTTAGATTTCCAGCACCACCTTAAAGAAAGAAAAGAAAGCA
ACAAAACTTAAAAAGCAGTTCATGGATATTCCCAAAAATACAGGTTTGTGCGGCGCCTGC
GGGGTGGGGTGTGTGTGTGTGGGG