Contig Data
morexGenes
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Map Locations of contig_69115 (2664 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_69115

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75842 3 1351 bp MLOC_75842.1 Available Available LOC_Os06g39590.1, FRAME:+2, EVALUE:4e-81, 13106.m04103 protein OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed





CDS Structure of MLOC_75842






Contig Sequence (2664 bp)

>contig_69115 2664 assembly3_WGSMorex_rbca.fasta
GTTCAATGAGTTTGTTTTCTGAAGCCACAAGAATACAAAACTTTATGTGAAACTTTAAAT
CTGTACCTAATCAATCATTAACATCAGTGAGTGATTTTTTAACTTTTTGAAAGAACGACA
AATATTTATCTATGGTAGGATCCGGCGCTCCCGGACTCAGTTGCTAGTTGGGACGTGAAG
GGCAACGTCTCTTTTATTCACTGGATTACCTTCATGCTAGTAATACTCAAATAAGGTTTT
TTGTTCCTCTGAAAACCAACAAAAATGTTGATCAAATTTTAGCCAATAAAAGAGGCGACA
ACATCAACAACTACAGGTGGAAATGCACCCTTCTGCAATGCAACAAATCTGCACCCACCC
ACCAAGACATGCATTATACTGCACAAAGAAAATCATGAGCATCTAGCCGAATAATAATTG
TGTCTAAATATTTATTGAAAAAAAATACCCTATGGAAAACGAAGAGTGAAGAAACAGGCA
AGTCAGCAGCAGGTGGGCAAGTGGCGCACCTTTATAGGCAGCATCCGCGCGGCCACATCC
CACCCATCCTCCTCCCCTCATATCCTCCTTCTCTCCCACGACACACCAAGCCAGCGACCG
ACGACGCACCGCACAACCAGCCGACGACAGCCTAGCTAGCGACCGCACATCGACCGACCA
GCGATCGCCGGAGTCCGGCCGAAGCAGCTTGCGAGCTCAAGCAACGCGCGCACGCCGATG
TCGACGAGCTCGACCAACTCCGCCGAGTCCCCGGCCGTTTCCGGCCTCGACTACGACGAC
ACCGCCCTCACCCTCGCCCTCCCCGGCTCCTCCGCCGACGACCGCAAGCGCGCCCACCAC
GACGAGCAAGACAAGCCTCCCTCTCCAAAGTACGCGGCCTTCTCCGTCTCTCGCATGTCG
CACGACGAGCTGGTCATGTATATTACATAGTCTTGTGTCTTGTGAATGGTTTCTGACCTG
GTACGTGCGCTTGTTGACTGACAGAGCGCGCGCTGTGGGATGGCCGCCGGTGCGGGCTTA
CCGACGCAACGCGCTGCGCGAGGAGGGCGCCTGCAAGCTCGTGAAGGTGGCCGTGGATGG
CGCCCCCTACCTGCGCAAGGTGGACCTCGCCGCGCACGGCGGGTATGAAGCCCTGCTCCG
CGCGCTCCACGGCATGTTCGCCCCGTGCCTCGCCGTCCGTGGCGAAGGCGAGCTCGGGAG
CAGGCTCGTGGACGCGGCCACCGGCGCCGAGTACGTGCCCACCTACGAGGACAGGGACGG
CGACTGGATGCTCGTCGGAGACGTCCCCTGGAAGTAAGCAAATTAAACTCCTAGCTATAG
TACGTTCTTGCAGATTTAAGGTCTTCACAAACAAATTTGCTAATCTGGTTCAAATCATGT
CAATGCAGAATGTTCGTCGAGTCCTGCAAGCGGATCCGACTCATGAAGAGCTCCGAGGCC
GTCAACCTAGGTAAGCAACAATAATCTAAGATCATGTCCTACAACTACAATCAGCATCTG
ACGATTGCAGATGAACACGCACAAACACATCACCAAGTTACTAACATTTCCTCTTAATAT
ATTTGATGCAGCTCCAAGACCATCCTCCCAATGATCAGTAGACACGGTTGATCTGTCCGA
GTTTGATTTCAAAATGTGTGCAATGGAAGAGGCTTGGCTGATCAGGTCCTCCATGTACCT
ATACAGTAGGATATAAGCATATACCAGTGTGATGTACTGTACTTGTCAAGTAGTTTTTGT
TCTTAGTTTCCTGGCTTCTTCATGTTCGCCGTTTCTGCAGGCAGCGGCCTTGTGGAGTAG
TGTTTGTCGGCAAGGGACATATCACATCTGCACGGTACATGTTGGTGCTGTTGTTGTTAG
ACTCTTGTGCCTTGCTGCACTGTATGATCACGAGATATACGAGTACAATCTCTGTCATTT
CTTTCTGTCGCGACTTTAGCTGCCTGCCTGCCTGCCTCTGTTTGTGCCATCTTTCCCATC
AATGCTGCTGCAGTAGTAGTAGTACGTGATGTGTCTTGTTCTTTTGGTTGGGAACTATGG
TCTTGTTTGGGTCGATAGATGGTGATTGCTGTGGAAACCAGTGGCAGTGGGAATCTGTGT
GTTTGGACAATTTGGCACCGAACGAAACAGCGCAGAAACTCAACCAATAGTGCAACTGAA
AGGTCCAGTTGCTCTGCTTAACTTGCGCCAGGTGACTCGTAAGAGTATTTTCATTTACCC
CAACAAAAGCAACTTCAACCGGCCGACCCAAACGGACAACACTTTTGTTTGTTTTTTGTC
CGTTTGGAACGGCCCGGACACCATCGTCCGTCTCCGCGTTGGGTCGACGCATGCGTCCAA
TGTTGATCCGATCCATTTTGTAACGACGCATAAAAAAATTATAGACAATTTCAAAAATAA
AAACAAACATAAATTAAACATTAAAGCCGGCTACAAAGCCCCGCGAGAGTCCATGCGTCT
CCATTACATTCATCATTACATTATAATTGAACATATTAAAAAACTAGACTGCGCGCTACC
CTAGGCGTCCTCGACGTCGGGGCAGTGAGGTCGGGCTGTGCCCGCGCGGACGGTGCTGGT
GGCGGCGGCGGCTCGGCACGGGCGCGCCCCTCACCCGGGGCCGCCACCCGCCACGCGTCG
TGGGAGCCGCGCCCTCCCCCCGGC