Contig Data
morexGenes
Links



Map Locations of contig_6896 (7109 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_6896

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75794 2 743 bp AK356900 Available Available None





CDS Structure of MLOC_75794






Contig Sequence (7109 bp)

>contig_6896 7109 assembly3_WGSMorex_rbca.fasta
ATATTAGTTTACAGAGGTAGTACTATATAAGATACTCTGTTACAGCATGTAACAAGGAAA
ACAAATAAATTGGATTATGCAGGATACAGTCTTCAAAGAAGCGCTTGATCTCTTGGAGGC
GGTGGGGAGACAGCTCACTGATGTCGTTGTAGTGACGGTATTCAGGATCATCCGCGCAGA
CTGCTATTATCTTGTCATCCTTTTCACCCTAGTGACAACCAACCGCCATCCTCAGTAAAA
CAAGGTAAGACTATTTTCATTCATCTCCCATTACCGCGCAGAGAATGGACAAGTAATACC
TGATCAATCATGGGCATAAGGCCAATTGCTCTAGCTCGGAGGAAAGAACCAGGAATAACA
GGCTCCTGTGAGAGATAAGAGAGTTACACGATGATCACTACTCCCTCTGTTTCAGTTTAT
AAGGTCTGCATAATTTGTCTTGAGTCAAATCCTTAAATTTTGACCATGATATTGTCAAGT
TTAAGAAGGTTTGACTTAAGACGAACTAGATAAGCCTTATAAAATGAAAAGGAGATAGTA
GATAATAACGCAGTTTACATAAGATGCAATGATACAATTGCAAATAGCTGGTGTTGATAA
TGCACTGAGTGCATGACCTACATGTTAAGACTAACCTGCATTAGGACCAACACATCCATT
GGGTCGTTGTCTTCACAAAGCGTCCTTGGAATGAAACCATAGTTGTGAGGATATACAACT
GATGAGTACAGAACTCTATCAACCTGTCATGTTGTAATAACAAAAGTACAGAAACAGAGA
TGCATTATGCTGGTGGATGCTTTTCAAGCTATTATTTCTTACATGAGTACAGTAAATAAT
ATTCAAGCAATTCATTGTCTTGAAACAGAACGTGTTGATAAATGGATCTTACAAACAGAA
CACACCTTAATCAGTCCAGTTTTCTTATCAAGCTCATATTTTACTTTGCTTCCCTTTGTG
ATCTCAACAACCTGCAGTAAGATATACATATAAACAATTAAGTTCATGAGTTAAAAGCAC
TGCCATGACCGACTTTACATAAAGCGTCTAGCAGCGTTGGCAGAACAATCAAGCCCGGTC
AATATACAGGTTTGTTACTGAGAAGCAATTTTGCTTACCAATAGACTAATGCATCTTAAT
GATGCACAAGTATCAACTGATCAATAAATTTAAGATGCTGGATTGTGTACTTAAAAAAAA
TGATTAGGTTAAAAGCACCACTCTTTCACTTTCAAGGCTACAAATTACTTGTACAATTCA
TAAGTCGCAAAAATAATAATAATATGGGACAAATTCCAGAGGTAACTAAAGGGCAGCCCG
GTGCATGTAGCTCCCGCTTGCGCAGGGTCCGACCACTTTGGGTCTATTGTACGCAGTCTT
TCCCTACATTTCTACAAGAGGCTATTTCCAGGACTTGAACCCGTGACCATCAAGGCAGCA
GCTTTACCACTGCGCCAAGGCTCCCCTTCAAATTCCAGATGTAACTACAGGTCTAAATTC
ACAATCACAATCATAGATCATGTCCATCCAAAGGGAAATTAAATATTTACAGAGGCATGC
TGAAGCCAGTGATACCAGGTTACCACAGGTAGTGCACAACTTCACATCCAATAATCATGC
CACCACCATTGGCCTCAATATTGACGAGAAGCCAACTGGGTAGGTAAAAATATAAAAGTG
AGAACCGGCGGGGATAATTTTATTCCATTTAATACTGATTGCTTCAATTTAACATTTTAA
CTAGCGTGTGCATACACTGCTTAACTGAATCGAAGCAGGAAATCATTGAAATGTTACCAC
AGGCTCTTACAACTGAATTACATTGATAAAACGTCAGTAATTTCGGTTCAGAGATAGCCC
AAGTCACCTTTTACCCAGCGCAACCTTGTATAAGCTAAAAAATACTAGCTTGTTTGGCAT
GTGCTGGTTTTCACTTTCAGTTTCAGAAATATTTCAGCAACAACCAAAATCACCAAAAGA
AAATTTCAGTGATTTTGATTTGCATTTCCACCATAAACACGCAAGAACAAAGTGAACAAT
GCCATTTCATTTTGTGCAAGCACGAACCCACTCCCAGGTCCAATTGCCCAAGATCCAACT
TCCTAATTTACTTTGCGACAAGAGAACATCAAATATCTGAACTGACGAATATGTTCAGCT
GCCAAGTCAGAAAGATAGCACACTTACAACATTAAACACGGCAGGAGCCCCAGGGCCTGT
GCACCAAAAAATTCAATCAGCAATTCAGCATGCTTATTTTTATCAACACATTTAGTACTG
GAGAAAAGGCTTGTCCTCCTCACCGATCTCAAGATCGTGCCACGGATGCGCGGCCACCGC
CCTCCTCGACAGCGACGACAGGATCCTCTCGTTGAGCTTGGGTGCCGGCCGGCTCGTCGG
CTGCTGCGCGGCAGCGGCGCTGGTCGAGTCCTCTTGGCTCATCCTGCTGCCTACCTACCA
AGATGAACCCACGGATCAGACCTCGGAAGAAGAGCAAACCCCCTTACTCGAAACAAACAC
TAGCAGACAGCTACAGAGTTCAGGGGCACAGCAACACAGAGTACCCATTTTTCCTTTCCT
TTTTGACCCGATTGGTGCTGGGTTCCTAGCTACGCCTAGATCTAGCCTCCGCGAGGAACA
TGAACAGATCATCCGGAAAGAACACGGACAGATCGGTGCGGAGTTCGCCGGCGGCGAAAA
CAGGACCAAACAGAGCAAAGCAACACTGGCGCCTAGCTAATCACCATGTATGGGATCGGA
TCGATGCTAATGAAAAAAGAAGCTTTTGGGATGGGAACGGAGGAGGATTCACCTGCGCTG
CTGCGGTTGGAGGTGGCAGAACGACGGGCGGCGGCGGTGGGGGAGGAAGAGAGATTGAGT
CGACTGATTGTCCTCCTCTGCTCGGCTACTCTGGCTCAGGCATGCGCTTAAAATGGAAGG
GAGTTTTGGCTTTTCAGCCACCACCCTGCTCTATTATTTTGTCACAGATCAGCCCCCTAG
GTACGGTCTAGCACTCACTCTAGCCTAATAACCACTATATATGTACTTAACTCTTTGTAA
GTATAATTTTTATGATGTCCATCTATTAATACTCGAGTGTCACTAACATCTCTTTTGTAT
TTTGAAATGAGGACAAAGTTTGGTTAAAAGCAAAACATGGCCAAAAGAGGTTAAATAATG
ATCATGTCACTCTCAATGAACATAAAAAAGAAAAAGGAAAACCGTATTTTATCCATGTAA
AAAAAGGCGCACACACCCATTAATTTATCAATCTGGACGCATAGGCTGCGACATATTGTA
ACCACGGGTTGCACTAGTTTACTGCTAGTGTTGCGGGTGCTAGACACACGAGGGAAATAG
ACAAGGACCAAGGCGTCCACCCACTTGTTGTTCAAAAATCCGAGCCGCGCTTGATTCGTC
GAGGAAAAGAAATCACAATACGAAACCAAGACTTATTAGCGAGTTTAGCCGAGACGACTT
CATTCCAGAACATGAATACGCACGCTCGTGTACAAATTAAGATGAAGCTTACCACCTTGT
ATCAGATCAACGAGAAGGGAAAGGAAGTTTTCAGAATGAAAAATAATAATTAAACACGAA
CATTCCATGAAAAATCATGAACATATTTTGAAAAGGAGAAAAAAAACAAATATTGTTATG
AAATCATGAATTGTTTTTGTTGAAAACAAGAACATTTCTTCAATCCCTGATTTTTTAAGA
ACACGTATACTTTTGAAAAACCGTGTAGTTCTCTGAATACAAGAACAATTTTCGAAACAC
AAACATTTTTGAAAGTAAGAATATTGTTTACAATTCCTGAATATTTTTGGAAGCACGAAC
ATTTAAATAAAAATTGTGAACAAAATATTCGTTATGAGAACATTTTTTGAAATTATGATT
TTTTTCCCGAAAATACCAAACAAAAAGAATAGGAAAAGGAAAACGAACAAAAAAAGGAAG
GAATAAAATGAAAACGAAGACATGAACTTTTTTGGAAAAATGAGAATATTTTTTGAAAAT
CCTGAATATTTCTAAAGTTATGGATAGTTTTTGAAAAACAAAAAATATTTGGAATCGAGA
ACATTTTTTGAAAAGCAAGATCATTTTCGAATTTTGAGAGCAATATTCGAACATGAACTT
ATTTTGAAAAGAAAAAATAACACAGAAAAGAAAAGCAAAAAGAAGAAACCGAGAACAGGA
AAAAGAAAGAAGAAAAAAAAGAAAAAAAAAATCGGTAAAGAAACGACTAGGATGTAGGAT
ATTTCCTGTTTGTCTCATTGCATCGATGCTCGGTCGTTCGTCTGTGTGAAGCGCCGGCAG
TTTGACACAGTGAGCAGCAAATAGGATATTTTCTGCTTGAGGGTGCGCGGACGCATCGTG
GCTGTTCATGCCTGATGGTGTTCTTTCTTCTATCTTTTTTCTGCCCAAGTGGGTTTTGGT
CCAAGGGGCCCATTTCTGGGGTCGCTTTAAGCTAGCACAGGAGCAAGCCTCGCGTAGGCA
GCGGCCTTTTTCTTTCTTATACATGTTCTTTTTTTTGCTTTAGCTTGTACTTTTCTTTAT
ACTTTAAAATATTCTATATATATACAGAAAAATCTTCAGAAACATATTTGAAAATTGTTA
AATAAGCATTACGAATGTATAATATGTAGTTACAAATTATACATAATTATTTTAAAAGTT
TGAATAAGTATTAAAAATGTTAAACGTGTATTTAGCAAATGTCGAATGAGTATTCAAAAT
TGTTGGGAAATAATTTTCAACATATTGAACAAGTATTTAAAAAATATAGAATAAGTATTC
AAGATGTTGAACAACTATTTCAAAATGTTGAGTAAGTAGTAAATAATATTAAACGAGTAC
TTGGAAAATGTTGAACAAGTATTTGAAAAAAATTACACGTGTATACAAAAAAATGTAGAT
CACTTACAAAAAATGTTTGTGACACATACGAAAATGTAGAGTGAAAACGAAAACAAATAC
ATGAAAAAATGGAGAAGAAAAAAAAACTAAATAAAAATGGAAATGAAAATGAAAACCAAA
CGAAAAATAGAATAACGCAACAAACAAGGATATAATAACCAAATAAAAGCAAAATTTAAA
ATTGAATGAAAGAAAAAAAGGAAAAATAAGGAAAAAAAATAAAAAATAGGAAAAATCCCA
AATAAAACGATTGGAATAGCCTCAAGTAGGACGCGCCCCTAGTTCTTAGCATGAAACGAA
CGTGGGTGGAGTGGTTAACGCGATGTGCGCCCTCGCTGAAGAGGGTTTGATCCTCCTCCT
CACATTTCACTCCTTTTTTTGCGAATGGGTGCGTGTAAATGGCCGGCACAATACGTCGTG
AGAGAGAAAATGCTTCAACGAATGCTGCTATTTGCATCGCTTAAGGCGATAAATAGTAGC
GGTGCCATTTCTGACCTTGGGTGACCACGGGTGACGAGCTAGTTGGGCCGGCCTTGTGGC
ACGTGGGTTCGCTGACCTAAACCTCTATCTACTCCTTTTTTAATTTGTCGGTTTGATGTT
GTCGGGACCAGAGTTAATAATGTGGGTAAAAAATTCCCCAAAAGTTATATGCACTGTGAT
GTTTTTTTACAAAAAGGACCCTGGCATTAATAGAAATATCAAACAGTGCAAAGCACCTCA
ACAAAACAAAAATTACTACGAAATCATTGAGATGCCCTTCATCTTTCATACTGTGTTGAC
GACGGGCCGTCACAGTTGCTCCACCCTGAGCCGGCATTACGTTGTTGGTTCCAGACGGAA
AGTCGTCGAACGGGATTAGAAGACCACATTCGTCATGGAGACGAAGAAGAAGGAATAACC
AACGGTGAAGCTCCTTGACGATCCATAGATACTCACAGCGAGAAAAAATCCTCAAAAACC
ACACCACTCCCACAAGCTTCTTGACATCGCCGTCGAGATGGGATAGACCCGGGAAGACTT
TATTGGACAAGGCAGCGCCACCACCATCTGTGTGCCGCCCCAACAAAGCTTGACCCTAAC
ATAAGAAAAAGATGCTAACCCTAACTACCAGCCAGAGACAAAGCACCAAGGTCACCACCC
CAAACCACCGCCGGAGTGGCAGATAGAGGCAAAGACCAGTGGCTTCACCGGTGGAGGGAG
GGGCGGCGATTTCTCCTCCTCGTCCGCCTCTCTCATGTGGTTGGAGAGATTTATGAAAGT
CATTCAAAATTATGCAAAAATAACAAATTTGAACATCAAATGTTATCCCGAAATGTCATC
CCAAACTTATTATTTTCATCGACGAGACACTACTGTTCCGTTTCGTATGAAAATTGTCAA
ACATGCTTGTCACACTAACACCGATATCCACAAAAAAATCAGAATTTTTTAAATACATTT
TACCATTTTTTGGCCGGTACTTTTCATCCGAGAGCAAATGTTTCCGAAAGCCAAAACACC
CCTCCCGTTGCTCGTGTCCTTCATTATTTTGTGTTATTGCATGACGACACGAGCAAGCAA
GCGTGAGTGAAAAAAACTGATATCTAAAGTGACGGCATGGCGAGACCTTGTAAGATATTG
ACACAATTACACAGTTGAATAAAAGGTTGAGATAACTTTTTTGGAACAAGCTGACTTCGA
AAGAAAACAACCAAATATTCTCCTTCCAAATAATTGCCACTTCAAAAAGAAGACACTCAA
TTTGATAGGGATGGGAGGTTAAACAGGCGCTCAGGGATGTTATTTTTTGCACTCTTTCTG
GTACTCCTCCATTGATGGATAGCAATCATCCACCAATAGACACCACTAGCAACAATTAAC
CGGTGTGCACTTTGAATGATGGACACACAATCCGCCTGGTATATTGATTTTCTCGTTGTC
CATGCCCTCGGTGGTTCGGCCTGTGGAGTGACAATGACAAAATAAACAAAACTGACAATT
GTATATTAAAAAACAGACTAAGGACATGAATGGAAGAAAACATATGAGAAAAATCAGGAA
GCAAAATAGCTTCGTTGTGTATGTGATAGTGTGACTTACACTGCGCATGAAAAGCAAAGC
ACGAAAAACAATTCATACCGACCTGCGTCGCCTAGCTTGCGCGGCTCGAGGGAAACCTAG
CCACCTGCTGTCGGCCCTCCCCCCGTCGT