Map Locations of contig_68848 (10367 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_68848

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75753 1 459 bp AK372984 Available Available None





CDS Structure of MLOC_75753






Contig Sequence (10367 bp)

>contig_68848 10367 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCGCCCCCCCCCCACACGCAGCGCCCCCCGCCGCAAACCCGCCCCCGCTATGG
ACGTCGTCTACGCCCTCAAGCGCCAGGGCGCACCCTCTACGGCTTCGGCGGCTGCCCTGC
CCCCGCCGCTGCTCCACCGAGTCGACCCTGGTAGCTGCTGCTGCTGTTCCGGTGCTATGG
TTTCGTTTCTGAATTCCGTATGCATGCGTTGCTGTTCCGTCGGTCTGTGTAGTTAGCGGG
AAGGCGATGGATCTGAATGTAATGGAATTGTTGGTTCTTGCAAGAAATGAATCTGAATGC
AATGGAATTTGTACTGCATCTCATGATACGACTGTACCTCCTGGCTTGTTTCTGTACATT
CTAGTAAAATTTCTCAGCAAGAACCTCGATGATGAATCTTTCAGTAATTTTCGTTTTGAT
TTTTTCACTGAATGGGATGCAAAATTCCCGCCTCAAAAAATTCATACAACGCGGGGTTCG
AATGTTCAAAGTCAAAAGGTGTCGGGGATTCCAGCCTGCCTTCGTACTATTTCTTGTTTT
TGTTAATGCAGTGTACTCTGACTCTGACCAACTCCCCTGTACATTGTGCTTGTTTGAACA
TACTGTCTGAAATGAAGATCACTGCTGCTACCCAACCACAGGCCAATTTCTGCCTGCTCA
ACTTCATGAGAAGATGTGTGTCACTGTCTATCTGAAGAGGAGTTGCAGCCTGTGTTTAGA
TCCTAGTTCCTCTCTATCAAAATAATTGTAGTTGGAGAGAACTAGACTAGTTCTTCCCAA
CTATAATTATTTAGACAAAGCACTTTTTAGCGCCTCCACCTCAGTTAACTTAGGCGACGG
GGCAACAGCCTCCTTCTGGCATTGCTCCTGGATCCGGGACTTTGAAGACAGCATACCCAC
AAATTTTCAAACACTCCAGAAGAAAGAATAGGTCAGTAAAAAAGGCGTTAGAGAACAACA
CCTGGATAGCGGATCTTGCACACGGAGATACAACACACATCTGGCGCGATGTGATTAGCT
TGCACAGGTGGCTGCAAGCTATGCATGTGCAACTGCTCGAACACACTCCAGACACCATCA
AATGGAGACATGAAGCATCAGGGGTTTACTCGGCAAGCTCAGCATATCAAGCCCAATTCC
TAGGCAATACAAGATCAGAAATTAGGAAGACCATATGGGATGCTTGGGCACCGCCTCGCC
TAAAAATCTTCGCTTGGTTGGTAGTTAAGAACAGGATGTGGTGCAACGACAGATTACAAA
GAAGAGGATGGCCAAATGGGTACTCCTGTCAGTTATGTCTCAGAAGCCTAGAATCAGCGA
CACACCTGTTCTGGGAATGCCCAATGGCAATAACAACATGGACGCAGGCGGGGTCTCGCA
CCGGATGTGCCTCGCTGAGCCCAAACATATGGAGCAGCAACACCACGCCACAAGAAATTC
TCTCACATATGATAACCAAGTCAAGACCGGAGCATAAAAAAGGGGTGAGGACAATGACCA
TCCTGATTCTCTCAGAAATTTGGAAAGAAAGAAATGACTGCACATTCCGAAACAAAACAG
CGCGGCTTGCAAACATAACCACCTCCATCACACGGTCCGTCGAGCTATGGAGGCAGGCAG
GGGCAGTTTTCTTAGAGCACCCATTTGGGGATCCACCGTGAGGAGTTTCTTTTCTAGCCT
AGGGGGCTGGACTTGGTCCATGTTTTCCATATTTTATTTTTATCCTTGATCCCAGGATCA
TCCATCATACAATGTATTTCTCGCCTTGCTACCTGCTTCGCAATATATGCCAGCCATCAA
CTGGGTTTAAAAAAAAAACTATAATTATTTAGGAACGGAGGAAGTAGATGTTATCTCTCA
TGCCTTGATGATTCTGTTCTGTAATACTTGTTGTATACTACTTTTTGACGTCTGAATGCT
TTACTTCATATCTGATCATGATCTTCACAATTAAAATGGAGCCGGGAGTGATCCTCCTGA
TAGCCTCAATTATTATTTATGCAGAAAGGTTATCTGAATTTAAGTGTTTTTTTCACCATT
CATACTAATCTGTGTTCTAAAACTTTTAGTTCAGCCAAATGGTTGTAGAACTGTCCATTG
TTCTGCAGAATTTTAGTTCACTCAAATGGTTATAGAATTGCAGAATGCTCAACATAAAAG
CTGACAAAATTGTACTGACGTGAGAAGAAAAAATATATCTTACGATCATCTTGTGCTAGT
ACTTTGTCAGCTGCCATTTTGCTATCGGGACATGTTTTTCTCCTGTTTTCTACTCTTTGA
TGATGAGTGACCAAAGCTTCCATGAGTTGTCTAACATTTGAAATTCAATCATTTCATGAA
TTATCTTAACAAATGAACATTTTCACTTCCTCGCCAACAAAAAAAAAAGACGATATAGAA
TTGACCCACACAATGATAGGTTGAACTAAATGAAACTAAATTGTTTTGGATATAGCTCTA
CCACTTAAGAAATAAAGCATCTCGATTAATTGTAGTAAATAAAAAACAGAAAAATAAGGC
AAACAATTTGGTTATTATGATTCCAACAGGAATACATAAAACATAGACAAGAAAAAATGG
TGTTATGAGTTTGCATTTTTTATAACACAGTACAATCAAAGTCACCCGCATACAGGAGGA
TACACTCATTCCTATGAACACACGCGCACACCCTACTTCAATGAGCACCTCCGAAAGACC
GAGCCGACACAGCATTTGGAGATTGGTGTAGTCGTCACATACATCTTCGTAGTCAACAAG
AACGTCTCCTTTCAATGAATGCACATCGCAGAAAGCCGTGCCATGAATCTAAGATAATAC
GAGCACCAATGTCATGTTTTTTTGCGGGTGAAACTTTGTATTACTCAAGTGGAAATACCA
CAGTCTGCATTACAAAGTTCAATAATCTCTGATAAACCAGAGTTGAGCCAAACTACCGTT
CTACACCTCATTCTAGCATACTTTGCCAGAAAATCACTAACATTATTTTGACTCCGTTGA
ACATAACTAAAAGTAGTGCTACGTATGTTCTTCAGAAGCTTGATTTCTGTCACCAACATG
GACATGATTGATCTGTCAATTGAGTCGCTCACGATCATGTTCGAAGCCTCCCGTGAGTCC
ATCTCTACCTGAATAGGTAGGTTTGTCCTCTGAATAGCCAGCGAAAGACCCTCCATACAT
GCACTTAATTCAGCTCCCAAAGCATTTCTGCAGGAAAAGAGCTCCCTGCATGATGTGTAA
ATGATCTGACCCGTACTGTCACGAAGAACCATACTTGCACCAGCTCGCCCATCGGTTGTC
CAAGAGCCATCGATGTTGAGCTTAGCCCAGCCCTCCATAGGCAAAACCCACTTAATGTTT
GGAGTAGGAGGTAGAACCAATCGCGATCTAGGTAACTATTCATAAGCAACCACTTGCTTC
CCCTTCTGCAGTTCCTCCTGTGAATAATTTAGTGATAGCAGTGAATCCAAGTATCCCATT
AGGAAACGTTTAGATTCCTCCATCGGAGGGTGTTCTTTGTAGTGAGTAACCTCATTCCGA
TTATGCCACACCCTCCATAAGGTCATCAGTAGCATGCCTCTCTCTAACACAGAAAGAGGG
TGAAGTGTATCCAACAACCATTTAGTGCCTGAATTCTTCAAATCCGCACGCTTAGGCAGA
CGCCAAACTGAATCCATACAATCCCAAAGCTGCACTGCTGGTGGGCACTTGCAGAGAGCA
TGGAAGGTATCTTCCTCTCCCCTCTCGCAGATTGGGCATAATCCACTCGTTTCTAGGGTG
CATTTGAATTTGTTCGCCAAGTTGGAAGGGAATTCACCGCAACGTGCCATGCAAAGTTTT
TGACCGTAGGAGGCACAAAACTTCCCCAAATAAGCTTCCAACATGCACGACGACCATCTC
GAGCAGCACTAGACGATTCCTCCGTTATTCTATATGTTTCCTCGAAGGCAAACTCATAAG
CTGATTTCACCGAGAAGACTCCAGATTTCGCCGGTCCCCATGCCAGCACATCCTCCCCTA
GCCTAGGAGATGCTCGGATTTCCTAATCTCCTGAACGTCACAAGACAGAAATATTTCTTG
GAGCAGATTGTAATTCCACGCACCATTATGTTGGAGCAGCTTAGACACATATTGAATTCT
GCAAGTAACGGTATGGGCCTGTAAGAGAAAGGTCTAGGGATCCAAGGATCCCTCCAGATT
CTTATATTGTTCCCATTCCCTACTCTCCATATAAGCCCTTTCTTGAGAAGATCTAGGCCA
TGGCTGATTGCAGTCCAAGTTGAAGAGGCATTTCCTGAGAAGACCGTATCCTCCAGTTTA
CCATTGGGATAGTATTTGTTGTTAAGCAATCTTACACACAGGTTATCAGGTCAAGTCAAT
AATCTCCACGCCTGCCTAGCCAGAAGCGCCTGATTAAAGAGGCGATAGTCCCTGAATCCA
GCACCACCTTTGCACTTCGGACGTTGCAACTTCTGCCAAGATTTCCAGTGAGTTTTGCGA
TGCCCCTTGGTTGATACCCAATAAAAGTTTCTGACCATCCCAATGAGATCATCACAGACC
GAAAAGGGTAGCTTGAAAACATCCATGATGAAAACTGGTAGTGCCTCTACAACCGACTTA
ATGAGCACTTCCCTGCCAGGTTGGGCTAGATGCCCATCGCCCCATTGAACTAGCCTCTTC
ATAAGCTGAGCTTGAAGATTTTGAAACCGAACTTTCGTCATTCTTCCTTTAGAGGTTCGC
AGCCCTAAGTACTTCTCTTCAAACCCTATGACAGAAATATTCAGAACATCCCGAACGTCC
TCCTGTGCAGTGACTCGACAAGCTTCTCCAAACATAATTGAACATTTCTCATAATTAAGG
ACTTGACCAGTAGCATTTGCATAAAGATCAAGACAATCCTTAACTTGTTCAGCTTGAGCT
CTTGAGGCCTCAAAGAAAAGGAGTGTATCATTTGCAAACAAAAGATGGGAGATGCCGAGG
GCGCGTCAACACATCTTTACAGGTAACAGAGATCCCATGTCCACACGTTGTCGAAGGAGT
GCAGAGAGTCCATCAGCGACAAACAGAAGCAAGAAGGGGGAGAGTGGATCACCTTGCCGC
AGACCACACGACGGTGCAAATGAATCCAAGAGGGTCCCATTAAATATTACCGAATATCTC
ACCGATGTGACACAAGCCATAATTGAGTCAATCCATCGATGATCAAAACCAGCTTTTGCA
TCACTTGCGTCAAGAAGCTCCAATCCACCCGACCATAAGCTTTTGAAAGATCAAGTTTAT
AAGCACATAAGCTTTTTGTTGGATCTTTTTCTTGCTTAATATAATGAATGCACTCGAAGG
CAATTAGTGCATTATCAGTTATCAACCTGCCAGAAACGAAGGCACTTTGCTCTGGTGAAA
CAATGTCATCCAACAGAGGCCTTAGTGTGTCCACCAAACACTTAGACACCACCTTGTAGG
TCACATTACATAAGCTGATGGGTCTGAATTGGGAGAGTCTTGTGGGGTTAGAAACTTTAG
GGATTAAGACAATAGAAGTTTCATTCACCCCTTCTGGCATCACACCTGATCTGAAAAACT
CCTTTATAGCCTTGATGATGTTTTCCTTCAATACATACAAATTACGTTGGAAAATCCTCG
CTGGGAACCCACCCGGCCCATGTTCCTTCAACGGTTCTATCTGAAAAATAGCATCCGAGA
TCTCCTTCTCAGAAAATTATGCACAGAGTTTTTCATTATCTGCATCAGTGATCACTGTGT
GCAACAAGTCCACAACTATAGCCGCATTTAGGCTTGGGTCAGCTGTGAAGATATTTTAAA
AATATGAAGTAGCCATGTTACCCATAATATCTTCACCTTTGAAGATAGTACCATTGATGT
CATGTAGCTCTCTAATTTTTATTTTTCCTTGCTCTCCAAACTGACTTGCTATGAAAAACT
TTATATTTCTATCTCCTTCCTTGAGACACATTATCCTCGAGCGTTGAAGCCAAAGCATTT
CCTCTTTATGAAGCAATTCATTAAGCTTGTATGACACTTTCTGTATCTCCTATCTTTCAG
CATTCATCCTCATCAATTCCTCTAGTTGACTACGTGACTTACTTATCTCCCTGGTGGCAT
TTCCAAACCTTATGTTGCTCCATGTTTTTAGAGCAGTCATGGTGGAGCAAGTCCAGTCCA
TCGCGTCCAAATCCATCCGTCCAAAACGGAAAGAAACCAACGTCTGAACTTGCTCGTACC
TGCACAAAACAGAAAGAAACGAACGCGAGAAGGCCAAGAACGGAAAGCGCTAAATCCACT
TAATCAAATCAACTAATCAACATCACTTCATCCTTCTGAATATGTGCTAACTCGCTTGTT
GTTACTTTCCCTTTTTCTGCTGATGAAGCGAGACTAAAGGAGAGGCGAGGGACAGTTCGA
TCAGGCCAAGTTTTAGGTCTGTGAGTTCTTCAGTTCCAATTCTACAAATAGTTTGATGCC
AACCGTTGGATGTTTATCCCTTTAGTCTTGTTTTTCCAACATTTATACTCTTTTATATTA
ATTGGTTTAGACATCTTATGTTTCAAGATCCAAGTTATGTCTTCTAAAATTCTACATAGA
AAATATGAATCTGGTTACTAGAAATATAAGATCTTTTTAGAAAAAATAGAGGATTTAGTT
CAACATCATAAAGGAGTTATAGATAACTTGAATATATAGTAGTTTTATTTTTCTGAAAAA
GTAGAGGCCTCGTTTTAGCGTTTGACACAGGACAACGAATTTTGCCGGCCCGGTCCTGTG
TGTGGGGGAAGTAAAGAAAAGTTTTTTTTACCTAGCTAGGGTTTTGGTAAGATTTGATTG
TGTACTGGTAGGGGAATGCAAGATTTCTTTTGATTTAGTTAATGTTTTGATAAGATTTAA
ACTTTTGGGTATGGGTAAGAGAACCAAAGGGAAGTTTTAATATGATTTGATTTGATTGAT
TGAGTTAATGCAACATGTGAGCAGGTGGTCGAGCGGAGGGAGGGGTGGACGTACCAACGT
ACAATCCCAACTTCTTTTGTTTAGCGCAATCCCAACTCCATTTTAGTGGCAAGAGATAAT
TGGTGACTATTTTCAAAGAATTGTAGGACCCGTTAGTAATATTAATAGGGTGCTACTTTA
ATCAAGAATCTTTTTCACAAAAAACATCAAACACCTGGTTTGGATGGCGTTTGGTGTGTA
GTAGGCCCTCAACGAGAGCTGCTATGGTATGGAAGGAGGTGTTCACTTCCTAAGACTAAC
TAGCGAACATCACGGGCCTGGTCCATGAGCAAAAGCAGCTTCTCGAAGCACCCTCTTCTC
TCGAACACAAGATTTGAGAAGGCTAGGCTACCTGCTAGGTTTCTCGCTGGAGCATCGATG
TCAATGCAAGAGACTAAAATGATCTCAGTGCCGGTGCCTTGACGGCGGTCCCGATTAAAA
CCGAAATTGAATTCGTGGAAAGGCAGCTATGGCCAGAGCTAGCAGCTAGGGTAATGGCTA
AGCCCTAGTTGCAGTTGCACGTCATGTATGGCTAGGAGAAAGAAGGAGGGGGCCTTATCC
AGGGGCTCTTCGGCCTCCTGGAGGTCGACGGGTGCTCTTCGGCCAGCCTCGGGCCGACAA
CCCTCTCTTCGTTCACCCGGTGGCCGATCGGTCCTCTTCGGCCTCCCGCCGTCCGACAGG
TCCCCCTTCGGCCCACCAGAGGCTGACCGGATAGTAATTTCCACAAAAAGAAAAATACAC
TTTGTGTTCTTTTTAAAAAAGACAAGTTCTCAATTAAAATAATGTAAATAGTGATATATA
ATAGCAAATAATTTTTGTCTTTTTGCCCAGAAGTTAATGTTGGTCTTTTTTCGATTTTTT
TATATAATAGTGCAAAATAAAGTCAAGTTTAATCTAAAAATATTTCATAACTATTTTAAC
TTTTAAATTAATTATTATTATTTCCCACATAGAATGCATATACAACCAGAAATCAAAGTG
TATTTCCTTTATTAAACCCCTTATCACACACCCTACCGTCCAACCCAACTGTGTGACCCA
CGCGTTACGAAAAGGCCACTGCTATACGTTGGCGTGTCGACCAAAATTTTGGTCGGTCCG
CCCCAGCCGCTCGATTCAGCACCGCGCAACCGTCCGATTGGATCCCCTTCGCGTGGCCTT
CTTCCTTCCGCCTCAATTCTTCCTCCCTCGCGCCGCCTTGCTCGTCCTCGATCATGTGCT
CGCCACCGTGCTCGTTCCTGGGACAATCGCGCTCGCTAGCCACCTAGGCCACCTTGTTCA
TCCTCGGCTCCGACCTCGCCACCATCATCGTCACATCTCCTCCTCACCCCCTGATTTGGC
TCCCATGGTAGCTTGTAGCACGGAACCTATGTACAAAACCACCGTTCCAGCACGGCACAA
CTCTAGTCACAACTTTTTGATGTGTGGTTGCAAAAAGCAATTATCGTCACCTGCTATGGT
CAGTGTGAAAAAGAAGAAAATAGCCCGTTCCAACAATTTTGTGTACCGTTCCAGCAAATG
TCGTGGCTGATTGAAGCAAAAACGATGCACTATGACAACGGTTCCAACAAACATGGTGGC
CGGTTCCAAAAATTCGAGATGCCGGTTATAGCAAATCCCGAAGCCGGTCCCAACATTATC
ACGGTTGCCCGGTGTCCATCCACAACCACAATGGTTGACTCGCCGAGAAGGATGTAGCAA
ATTGTCATCACCGTGGTGGCAAAAATCCAACAATGTTTTAGCAAAAAAATCAGCAACCAA
ACTCCAGCAGTCGGTTCAAACCAAAAAAAAAGCCGATTGTAGCATCTCTCATGAAGGGTT
ATAAGATCTTATTGCCAGGGGGTTGAAGGTGGTGTTGGCACATCCATGGCGACTATCACA
TCGCCAATGGTGGGAAGGGTATCGAGGGGTGTCGTGTGGGAGACGACAACCAACTTGTCG
AAGGAGAAAATAGGCGAGGGTCGGGAAGGGGATCACCATGGCTTGGAGACCGAATGTGTG
TGGTAGCGCGGTGGTCGCCTCATGTGTTCCTGCGCAAAAAAGAAGAAAGGGGTGAGAGGA
AGAAGAGAACTGGATAAAAAAGTGAAAGGGATGGTGACGACTTGGAAGGTTGCGTGGCGA
CTGGTCAAACTTGTGCGAGAGCAACACGGGCGTTGGATTGTGCGTGATTGCACAACCCGC
AAGTGGCCGGCGCAGCGTTCGGCCAACACGCCGAACACAAATGTTTGAGAAGTCGTGAGA
ATTTTCACTAGAAATTTTGATACATTAACGCATCACCAAGAATCACATGCAAGGCGCCAT
ATTTCAAACGAATCGACAACACCACAACACCTTACAACAACTCCGCCCGTCACATACCGT
CCTTGTCTCTTATAACTAATATCCACAGCTTGAGTTTTGAGACCACAAAAACAAAGACAA
CATATCGAATCAACCATTGAACAAATGATAGACCGAGAGGCAAACTACTACTCCATCACG
ACTTTCAACGATGTCTTGACTCTAATGAAACGAAAAAAAAAAACAATATGACTGCACAAA
ACGGAAAAATGAGAATGGTGCTCGGGCACCAACTTGGTGCCCATTTTGTACAATGCTAAA
AGATTTAAATTTGTTTGTAAGCACACATACACATGTATATGATATGGGCGAAATTTTGTA
ACATTTTGTTTTCACACGTGCACAAAAAGACGAACATGTACCTATTTTCAAATAGGCCAT
CCTTTTTGTTGTTGAGACGGATTTTCTTTATATGTGTTACAAATTATATATACATTTTGT
AAAACGAAATTTAATAGGCATGTAGTGAACACATAGAAGTTTCCGTTGTATTTTAAAGAA
AAAATTGGAATTACAAAATATGAATTTTGCTTTCTTTAAAAAACAACCTTCATGGTACTT
GAGAACCATAAGTCCGCACTCTACACAAACCTATTTATTTTTAAGTTGACCTACACGGAG
ACAAAAAGGGAAAAGTTCCCCTAACCCCAAAACCCAACCGCCATCAGCTTTTATGAATCC
CAATACAACTCTTGCTAAGAGCATCTCCAACATTTGCAGCGTGCGCTGACACTTTTTATA
CGCGTCCCGTGCACAAAAATGTCAGTTTTTAGCGCGCATGTTTTTTTTTTACATTTGTTG
GAGATGCTCTAAGAAACTGTAATTTGACACATATGAATTCATTAGATAAAAGAATCAAAT
GGGTGGAATAGAATTAGACTGATTTTATTGCCTAAATTCCATTATAACTTCATTAGTTTA
CTAGCACAAATGCCCGTGCGTTGCAACGGGAGAAAATAATCCTTCCTCTCCACGCCAAGT
TGAGTGAGGAATCTAGCATAAAAGGACACAAATACGGCCAACACAAC