Map Locations of contig_6861 (9950 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_6861

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75685 3 3010 bp AK250641.1 Available Available None





CDS Structure of MLOC_75685






Contig Sequence (9950 bp)

>contig_6861 9950 assembly3_WGSMorex_rbca.fasta
CGTCGTCCTCTCTTCTCCTCCACCACGCGCCGCCGCCGCCATCGTCAATGTGATCTATCT
ATCTATCAAGAAGTTGTTTTTTTTCTGTCGTCGGGGGATATAGATATATATAGATATAAG
GGTTGTTGCTCCACGCGTATCGGATCGGAGTCTTGATTCCCCATCGTGATTCTATTTCAT
TTGAATCCGTATCCAAGCCCAACACTTTTTTTCTTTTTTGCGGTTTAATATGGTTTGAAT
CTTATTTAACTCGTACGTATGTATATACTTACATCTAAGCCCAACTTTTTTTTTTTTTGA
ACGTGGTATATACTGCATCATATCATATCACACATCGGCAACTTATATGCGACGGAAAAA
TGGTAATAATTGGATAGTAATAATAACATGACAATTACAGTTTACGATTGGATGGTAATT
ATTTATAATCTGGATTTTTAGGAAACTACATAAATCTTGCCTCAAGGAAACTAATAACAG
CTGGGGCGTTTGCTGGAGACGACCAGATATTTCATTTTTCGAATTTGGCTCCATCGCAAC
TAAACTTTGCTTCAATCTTCCTTCAAAAAGACAAACTTTGCTTCGATCTAGTGGTAAATT
GTTTCCAAATAGCTTGGTTTCAACGTGTCAAACCATGCTGGTATCGGCTGTAGAATTTGA
TTCCATGGTGAATAGTAATGAAATTTGCTTCCACACCAACCAACATGGGCCCACAAAATA
AGCGGAGGCGGCAGTGAATTTCATCCATCATAACCCATCTTTTTATTAAGATATGAATGG
GAAAGCAGATACAAAATGGCCAGGTTACATGTCACATAAGCGCAGCAGAGGCTTACAACA
ATAGCCTCACAAGCACCCTAACAACAACAAACAAACAAACCAACCAACCTAGCCGTGAGG
GCCCCCGAGTGCTACTCGACGATATGTCCACAACTTCAGAGCCCATTTACCTCTAGGTTG
CTGTCATCGCTGCCAGGGATAGGGAATGATGCATCCACCGCGCTTCCCAAGCAAACACTT
GACACTTCAGGTTCTAAAAGCACACTTATCAAGAGACCAGACGAGTCTCAACAAATCAGC
TCAGCTTCATTGAAGCTATCTGGGTAGCAAGCTCCATGGCCTCCTTGACCCGAGAAGCAT
CACTTCCCTGCATTCATATTTGCATATATTGCATTGCAAGGATTATTCACAGATAGTAAC
GGTAATTACTCGTGCGTACTAGACTCTTTTTACCTGGCCCTGGGCGAGGCCATTCTTGCC
GCCGCCTCCTTTCCCCTTGAGTGGTGCGATTGAAGGCGTAAGCCAATCCAACACCTTGAA
GCCATTGGGTGCGTCGGGAGGTACACCCGCATAAATGACAGCCTTGTTTGATGCCTCGTC
TGTGCTGAATACCATTATCGGCAGACCCTGGCACCAGCACATCCAAAGATTTGACACAAG
GAATACAAATTTAATGATTCATAAATATAAATAAAGTTGTTGGAGTAAGTTGGAAATTAT
GCTGAATCTATAGTTATTTTAAGATGATGGGGAACACTACTAGACAGAAACGGATTGGAC
TACCGACCTTGAACCGGTCCATGGCTTTGACAACTGCTTCCCGGACAGCAGTGGTATCAA
GGCCCACATCGGCGTGGGTAACACAGAAGGATTTTCCTTCAGAAACAGCAGCTTCTGCGG
CATCTATGGCAGTCTTGACAGCCTTTTGGATATTTTCTTTGCCCATTTTCTTCTTCGCCT
CCCTAAGTTGCTCCTGATATATGCAACAGCCATAATCAGCTTTCATTTTAACTATTGACA
AGATATGACAAATGAACTGAAGCGTTTACAGACCTCCAGCTTTGAGATATTGCCTTTTAG
ATCAGCTTTTCTTGCAGCTGGGATAGCAGCTGCATCCAGTGTATTCTTGATGGACCCAAT
TTTCTGATGAAGAAACATCATTCTTAGATACAATCTGATACTATAAAGCAGATCAACAGG
AAATGGCTACAAAGTACAATTGATGCCATCTATTTACATAAAGGTTACGGACATAGTATT
TTTTTTCTAAGAAAACAAACAAAAATGACAATAACTTTTAACAATATCCAATTTATCAGA
GTATCAAAACCATATAGCTCACACTAAGAGACACAAGCACAAAAGGGAAAAGCTAAGTAC
CTTTTCCAATGTCGCCCCGTCCAGTTTAGATGCTTCATTGATATCACTATCGATAGATGA
TGCCAACTTCATAGCCTGTGAGGCACACTCAGCAGTAACAGCCGTTATCCTCCGAACACC
TTTTGCGATACCCTCTTCAGATATGAGAGCAAATGCTGCAGCATCTCTAGTGTTTGAAAT
GTGTGTACCTGACATACATAAACTTTAGATGACATGAACACACAAATGTAGAATTACATA
GAACGGAGTAGCAAGTATACCTCCACACAGCTCAGTTGATATGGATAACCATTCTTTGCT
TTCAGGGTTTGCAAGCAGATCTTCCACTTTGCGGCCAATCGATACAACTCTTACAGGATC
AGGGTAGATCTACAAAGTCCATATGCAAAACGAATTACACAAAACAACAGGGCAGGCAAA
CGAGATATGAGAACATGGTATGCCAAGCTGGGTAAGAGAACACACTTCACCAAACACAGC
TCGCAGACCATTTATGCGCTTTGCGTCAACCAATTTTATTTCTTGTGCAGATACCTCCAG
CTCATCCTTTATTTGCTGGTTCACTATATACTCAATTTTTCTCAGATCTTCAGGCTGAAC
AGGTTTCCCTGTTATTATGTACTAACAGTTGAGTTGACAAGCTGAGGAAAAACAACATGT
GTATGCATGAAATATATAAAGAATCACAGCATACCATGGGAGAAATCAAATCTCAGCTTC
TCTGGAAGAACAATGGAACCTTTCTGGTCAATATGGTCACCAAGTACTTCCTACATTTAC
AATAGCGGAACCATCATGAGTGCAAAAAAGTACTCCCTGTAAAATCTGAGAGGCTTGAAA
ACATACCCTTAGAGCAAAGTTCAGCATATGGGTACATGTGTGGTTTGGAGCAATGAGAGT
ACGCCGTGTGTAATCAACCTACCAAGAGGAATAGAAGTATCGCAATGTAATTTAGCAAAT
TTCACAGGTCAATTGATTCGGTATAAAGAACTAATCAGTACAGAATGTTACTTTGCATTT
CACTTCATCACCAACAGATAATGCCTTGGAGTTAGGCCCTTCCAGAAATGAACCGATATG
CAGGACATAGCCAGCAAACACTTGGACATTGTTCACAGTGAAAGATCCAGTTGGCCCCTC
GATACTCCCAGTGTCATAGATCTATTGCAGAAATATCACATGGCATGTCAAAAGAATTCA
TACAATGCATGACGCAACTCCCAAACATGCAGGGGAGCTGTGTATATATATACAACCCCT
AACCCCACAAGATAGAACAAGAAACAACCATGGCAGCATGGTGACTTCAAATAAACAAGA
AAACATCCATGGTTGTTGAATGTTAATTGCAATGTTTGTTCTTTTGGCAATGTACCGGTA
TTAACTTGTCAAATTTTGAAGCCAATGTATTGTATGGGCAACTTCGAAGCCCTCAACACT
ATTTTCCTCAGAGTGAGAGATTGGATATAACCGTAATGTGGTGTTCAAAATGGTGTAATG
ACAGAAGGCATTACTTCAACCATTTATTTATGAAGTGATGTAGATTATTAGGATGACATA
CAAAACAACAAAGAAAGCCAATCAGGTTTCAACCAACGGGAGGTATCACTGCAGGGTGTA
CTAATGAATCAACCAACATGATCATGTTAAAATTAACAAAAATTACTGTCATGTGGGGTC
ATTGCTACATGAGGACACCCCATCAGATATCAGCTCAATAGTTACTACAAAAAATATCTA
ACTCGCAAACTAAGGTAACTATCAAGCTGGTGTCAGCCGGGGTTTCTTCCTGTAGGCCCC
ACATGACAATTACAATATCATGTTTATTCAGTGGGTAAGCTGATAATTTATTGCATGATT
GCAGCTCGAGAGGTGATTGCACTTGACATTTTCATTCAACTACAACAACATGCTGTCGAA
AGTGAAGTTGTACCTGACCACCCTGTTCCGCATAGAAGCTTGTGCTTTCCAAAACAAGGC
CAAAATCTTCATCACCAGATGCAGTGGCTATGAACTCTGAGCCAGTATAGATAGCTTTTA
CCACACTGCTATGTACCTGCAAAATGTTTTTAGGTATATCGGCCATAATCAATATACAAG
TGTTTAACCACAGTGCGAAATATGAACAGTGCAAGAACAATCAAAAGCAGGTAGCCAGGT
AAATTCACTACTTGAATGGAATTCTACAAAATCCCAAACAGGCACTGAATGTTTAAGGAA
CTGTACCTAACAGCCAAACAACAACTAAATAATCTAACTAAGCATCTAACCTCGTGTTTG
AATTTCGGGCTATCATTTGTGCTGGCAAGCCCCTGATTGCGCAGGTGCGATGTAGCATTA
GCATCCAGGACAATAGACTTGCCACCAGCCTGCGAGAAAAACATATATAGCAAAATCAGA
AAGAAATATGGTATATAAACCATAACAGATAAAAGCTGCCAATCAATTTAAGAAGAAATA
AATACAACCTTGTAGCGAGCATTTCTAGCCTTTTGTCTTGCTTCTTCCATAGCAATATTA
AAACCCTCCATGTCAACAGATAGCCCGAAGTCTACTGCCATGACCTATGAGATAGGAACA
ACAACGATACCAGAAAAACAGACAATAAGAGCTTTAGCAACAGCATAAACATGAAAATAT
AGCACTGTCAAATTAATTTGATTAAATTTACTGATGAAAACATGAAGAACAAACCTCAGT
CAAATCAATTGGATAGCCATAGGTGTCCCACAGAACAAATGCATCCTGAAAGAACAAATA
ACGGTTGCAATACATGACAGATAGCAATATAAACTCGAAAAATTCAGCAGGATGTAACAG
AAGATTGATAAACATAACCGAAGTATGATCTAAGAGACATGTCTCTATGGAGTGGACTCC
CATTCTTAGAATATGGACGACGAAAAGAATTATTCCACATTACTGTAGAGAATATGATCA
AGTTTACCAAATAGTCAAATTCCGTAGTTTTTGACATGTTTCTCGAATACGAAGGAATAA
ATAGAAATTAGAACGACAAAATAGAGAATATGATCAACTTAACCAGATAGTGCCTACACA
ATATTTAAAACGACGTCCGAGAATAACTACCAACAACGTATCCGACAGATATCCAAGTTC
TGGTTCCTCATGCCATTTTTAAGGGGTTTGGTCAGTTTGTAACTATCTGAACCATTTTCA
CCGCTGCCATCAAACCATTTGTATGACAGGATAGTTAGATTCTCAGGAATTGTTCTTAAG
GCGCCAAGGCAACCTAAGGTGAGTACCCACTGCCCTGACATCAGTGAGATAACACAACAC
ATGCTCAGACAACAAACAAACTATAAGTCTGCTTAGGTGCAAACATCTTCTAGTGAAAAC
AAAATGACTCAAGTAAGATGGTAGTAATTCAAAACCAAAGCACTTGCCTGGCCACTAAGT
ACAGTCCCGCCATTCTCCTTGACAGCATCTGCGGCTTTCTTAAATCTCTCATATCCCTGA
AAATTACACCAACAGCACAGTCAGTTAACCACCTGAACAGCCACAAGAAAGGACAATACA
TATTATGATGGTTCTAAGAAAAGAACGGTCAACTAAATTTCAACTGTAAGCTTTCTTAGT
CTCTGTTCCTATATGAAACACATTGGCAAGGCGCCTATTAGGAACTACCATTAAAGTATA
AGCATGATAAACATAATCATGCCCAAGTGGAAACCAAATAAATAGGATTACTAATGGTCA
TTTCATAGAAAAGGTGAGACAATTTATCGTGTATGCTATTGTGATTGCACTAAGCTGATG
TAAACCAGGATTGAAACAATCACACCGGATATATTCCCTAATGTTTTGCCTCATAACAAG
AGACTACCTGGTTACTCAGCACAACACGTTAATATATATAAAGCCTTTTTAGCAGTATCT
CACGAGCAAAACAGCGGTACAGAAGATACAAGGTATAAACTGGCCCAGATCCTCCGGCAA
CAACAAAAAGTTAGGTTATATGATAACAAACTAGCCAAATTACTGCAAAACAGCGGTACA
GAAGATACAAGGTATAAACTGGCCCAGATCCTCCAGCAACAACAAAAAGTTAGGTTATAT
GATAACAAACTAGCCAAATTACTTTGGGACTAGCACATGTTTACAAGGATAGAGTATGCT
TTAAAGAAAAGGATAGAGTATGAAAACACTGCCTAAGAGTGTGCAAACACCCAGATTTGA
TTGCAATGAAATTACTTCAACAAGCTTCACTTGGGCCAAATTGATGTTACTGTTATGCAA
ATACTCCTGGCAACCAAGATTACCTTTGCTAGAGTGCTCTCAAAGCTTGCCTCTTCTTCT
TTAATTATATCTTTAATATTCTTTTCATTGTCCTTCAGCTCAGGAAACACATCACCCATC
ACTCGGACAAAAACATCTACAAGGCTGTACAAGACAGGTACAAAACAATGGTAAATCAAA
TGCCAGCTTTGAGAACAACAACGATGAGAGAGGGATGGCAGTCACCGGAAATATGGAGAG
AGAATCAGAAACAAATCGGAAAAATTGATGTGGAAGTAAAAGGTATCATGCTAGCAGGAG
CCAGCCACAGCCAGAGGCATGGACTATTCTAATAATTGGGCTGGTTACCCATTTCTTGCA
TTGGGCCTAAAAGGTCTGTTGCTCTTGTGAGCATGGTTAGTCACTACTAACTGGACAGTA
ATGTTTAAGCCAGCACAACCACGTATCCATTTAATCCCTTTTTATTGATTCCCTTTTTGA
GCATTATATGCATGTACATAAAGTTAACTATATGTAGACTATAAAACCCAGAACAGAAAC
CTGAATGATTTGGTACAAGTATGTTCAGTTCCAAACACCAAACTGGAAAGGTGACCAGAA
TGGATTCAATAAGTATGCTTTCAACCAAATAGCAAAGATGGACCAAAGCTGCCAAATAAT
TTGGATGTATTTAGTAATTAATTGGTCCACATGCACTTTAAGGCTTTGTATAGAAAGAGC
GGCTGTTGTATCAGTACATATATGTGTGTATCTAATGTGTGCACTTTTTTTCCACCATCT
GTTAACCATCCTACGTGTGGGATGTTAGGGGAGGCAAGGTTTCAAAACCTCATTATATCT
AATTTCTATGGAGCATACGCACCCCTCCTATTGATGACTACATGACATATAAAGAATCAC
ATTAACGTTCTGAATATTGGCATTGTCTCCAAAACTCTGTCCGCCAATTTTTTTAGGAAA
ATTGGTGTTAAAATTTTACTGCTGGTCAACGGTATTTATTCTACAGTGGTGGGAGTGGCA
GTTAATTGGTAAATGAATATTCAAGTTATGGCAAATACATTATACAGCAGTTCCAGAATA
CACTCAAGCATAGGACAGTGATATCCAAGAACCCAGGCCATCACACTTATTAAGGTAGTT
ATTATGAAAAAAAAAACTCCCCTAGGCATGTGCTTAAGCATGCTTAGGCGCTAGGCAACA
ACCAAACGCCTAGCACTTAATCATGCTAGGTGCGCGCTTACATGAGATAGGCACTAGGCA
ATGCCAAAACACACTAGCACTTTTTTTCCTACAAGCGAACAAAATTCCAAAACCATGCGT
CGTTATCAGGACCAAATGCCAGTTAAAATAAACATTTGCTAGCAAAAAAATATGCACATG
AACCTGCAACAAAAGGTATTGCGGGAACAATGCTATTGTGCACACAAGCAAGCAGCCAAC
ACAGATGACTCCAGTTCCAAGTTATGCCCAAGAACCCAAACCCAAATTAAAGTAACAAAT
AGCAGAATCACTCATGACCCTAGGCTCATAATAAATTAGCTAAAACCGTGTGTGAACATA
GTTTTTTCTTATTGTCATATGATATCTCTACAGTCATCCTCATAAGCCTTAATTGCATTT
TTAGCACTCGGAGTAAAAAAAAGTTATGCAAATATACCATTAAGGAAAGCATACAGAATA
CAATAGATGCAGGTTACAGTTCTTACGAGCTAAAAAATCCTTGCTTTGCCATCAATTTTT
GATGACCAAAGTGAACAGCACGTCTAAGTATACGCCTTAGAACATACTCTCTTCCATCAT
TTCCTACAGAAAAACTCATATTAGAACAAAGAAACATCACTGTATAACACAAAACAAAGC
CCTGAAACATTGTAAAAATACAATCGCTCAGTAGTTGCGACAAAATCTTTTCAGTTCTAC
ATCATCCTCACTAGATAGGTTGACCAAGAACATCATCCTCACTAGATAGATTGACCAAGA
AGGTGGATCCACCAAAAACAATCCCATGAATAAACTGAATGAAGACAATAACAGATTTTC
TGCAGTTGTTCTGAACCTTTATTGCCAAAAATATTATGTAACTGCCAAAATATTATCAAG
GCATTTAGATGTATTATTATGCAGCAAGTAACTTAAAAAGGCATTTAGATGTATTATTAT
TATCCATCTGTTTACATTACACAACTAAACCATACTTATATGGATGGCAATAGTTTTAAA
CCATGTATCCCCAACCAAAATAGTATGAACTCACCAGGTCGAGAACCATCAGCGATAGCA
AAAGAAAGGGTTCTTATGTGATCTGCAACAACCCTATATGCCATATCAACTTTCCCAACA
TCATCGGATCCTACTTTACCAGAGTATGGTTGAATTCCAGCGCCTGCCAGCTGCATTCAT
AATGCATGTCCAATTCATAATAAATATCATTTACTTAAGTTTAGGCAATAATTTTATTAC
TTGAGCCAAATACTGCAGTCACAACTCACAAGCACAAAAAAGAAGGTGCAAGTGTGCATC
TGGACAAAATACCTTGTGGATGGCATCAAATAATGGCATGAATACATCTGTATCGTAATT
GCTCATTTTGTTCTGAAGGATAGACGTTAAACGCTCGAAGCCCATTCCAGTGTCAACGTG
TTTTGCTGGCAAGGATCTCAAAGTACCGTCTGCTTCCCTGTTGAACTGGGTATTAATCAA
AATAGCCAAATGTCAGTGCATATAGAACAGATAAAAAGCAAATGGCTAGGCGCGCACACA
TGGAACAGAGTAACTGCAACGTATTTGATATTAAAGCTCAATAATCTAGAAAGAAACGAG
TTTGTAAAAAATAGAATGTTAACCTGAATAAAGACAAGATTCCATATCTCAATACATGTA
GGGTCATCATTATTGACTAGTGAAGCTGCGTCACGGTTGCCAATACGATCAAAATGAATC
TCTGTGCATGGGCCACAAGGACCTGTGTCGCCCATCTCCCAAAAGTTGTCCTGCTCAAAG
AATGCATTGTTAACACAGTTCTTTAATATATAGGGACATTCAGACAACAGCATAGGTCCA
ACAGAAACGAAGATTATACTACAACATAACGTCGAAAACAGATACGAGCTCGACCAACAA
ACCAAGCAGAGCACATGGAGAATACAATACCTTGCAACCGAAAGGCAGAACCCTTTCAGT
GGGTAGATACTTCAACCATATGTCTTTGGACTCTGTGTCGGGGGCGAGACCAGCCTTGTC
ATCGCCACCAAAGTATGTCGCATAAATCCTATCAGTGGGCAATTTGTAGACCTGTGCATA
CATACATACAGTATGAAATACAGTAGTTAGCAAACAAGAAGATGATAGTTTTGGCTTGTG
ATGAAGGGAAGGGAAGGGATGATGAATTTGTAGACCTGTGTGAGGAGCTCCCATGCGTAT
GCGATGGCCTGGTCCTTGAAGTAGTCCCCGAAGGACCAGTTGCCGAGCATCTCGAAGAAG
GTGTGGTGGTATGTGTCCTTGCCGACGTCGTCGAGGTCGTTGTGCTTGCC