Contig Data
morexGenes
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Map Locations of contig_68567 (4086 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_68567

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75672 1 507 bp None Available Available None
MLOC_75673 1 900 bp MLOC_75673.1 Available Available LOC_Os10g15300.1, FRAME:-2, EVALUE:2e-30, 13110.m01319 protein expressed protein





CDS Structure of MLOC_75672






CDS Structure of MLOC_75673






Contig Sequence (4086 bp)

>contig_68567 4086 assembly3_WGSMorex_rbca.fasta
GTAAGTGCTCTTGGCGATTGGTCCTCATATTTTACTAACAGGGTAAATGCTACTAATTGT
GAAGGGCTCTCGCCACTCCAGAAGTGTACAACGGCTATTCGTATGCTTGCCTATGGGACC
TCGGCTGACCAGCTTGATGAGGTGCTAAGTATTGGCGCAAGCACATCATTAGAGTGTTTG
GGTTATTTTGCGAAAGGCGTGATTGCTAAGTTTGGCGAAGAGTATTTCCGGCCTCCTTCA
GTAGACGAACTTGAACATTTACTGCAAATTGGCGAGTCGCGTGGCTTCCCAGGCATGATA
GAAAGCATAGATTGTATGCATTGGCAGTGGAAGAATTGTTCAGTTGCATGGAGGGGTCAA
TTTACTCATGGTGATCATGGTGTCCCAACTATGATACTTGAAGCGGTTGCTTCACATGAC
CTTCGGATATGGCATGCTTATTTTGGTGTCGCTGGGTCCAACAACGACATCAATGTTCAG
AATCGGTCGACATTGTTCACCAATACTTTGAAAGGAGAAACTCCTAGGGTGCAATTTAAT
GTCAATGGGAGACAATATAACTCAAGTTACTATCTCGTTGATGGAGTATATCCAGAATGG
GCTATCTTCGTAAAGACAATACCACTTCCTCAAAGTGAAAAGGATAAATTATTTGCAAAG
CGTCAAGAAGGAGCGAGGAAGGATGTGGAGAGGGCTTTTGGGGCATTGCAAGCTCGCTTC
AATATTGTTCGTCGTCCGGCACGACTGTGGAAACGGAAAGCCATCGAAGATATCATGAAA
GCTTGCGTCAGACTTCACAATATGATAGTTGAGGATGAACGAGAAACCTTTCACGTTCCA
CTCGACTTGAATAATGACGCGGGGTCATCATTTGCTCTACCACCTGAAGTCATCGTTGGT
CCACACGTCACGTTCACAGACTACCTATAAAGAAGTTCCGCTATTCAAGACCGCCAAACG
CATCTCCAGCTGAAGGATGATCTAGTCAACAATATTTGGCAACGTTTTGGCAGTGAATAA
TATTTACGATTACTTGAAATACATTTGTATGATGCAATTTGTGTTATTATAGTTACCTAT
TTGAACTATAAATTTTTTCTATAGCTTACATCAAATCATTAATTATATTTAACAATGCCA
CAAGCTTTATTTTGTTATGCATGTCCGACATATTTGTGCAGCTGCCAATGCAAATTTCCT
TCGTGCAATTCAATTTTACTCACGTACTTAGCGGATGTGTAAAGCTGACACAAAAGAGTC
TACAAATATGCTGCTACAACACATCACCATATTTTTAGTCATTTGAGATAAAGCTAGGAG
ATAACCATTGTATATTATCCTGCTCCCTCCGTTCCTAAATATAAATCTTTTTAGTAATTT
CATAAGGGGACTACATACAAAGTAAAATGAATGAATCTACACTCTAAAGTATGACTATAT
ACATTCATATGTAGCCTCTACTAGAACCTCTAAAAAGACTTATATTTAAGAATGGGGGAG
TACGTTTTTATTGTCTTATCTTGTCTATGTGGCAGACTTAAGATAAGATATCTTATCGAC
CATTGTACATGTCCTTAAAAAAAGGAATTTGACAGAGTGTGGGTAGGAGATTTCAGGAGA
AGCTGGGAGGGGGACGACTCTTGGCCCTAAGATCTACGTGACACGGTGAAACTGTGCAAT
TATACGATCAAGAACACGCTTAGAATGCTTGGCCAAACCGATTCGAGAGTACAAACTGAA
CCAGGAACACGCACTCGATCGAGTCTCACACGATTCACAGCATCAGCCATGCATTCTTAG
CCAAAGCACTGCTCCGACGGCAACGGGCCCGGGATCGACCCCTGCTGGAAGAACTGCAGC
CCGAACACGGCGGCGATGGCGACGACGGTGAGGTACGCGACGCCCTCGGCGGCGCCGAGG
AGGCCGTAGGGCCCTGCCGGGAGGCCCGACCCGGTGCGCACCTTGGTGGTGAGCGACCAG
CCGACGATGCCCGCCACCACGAGGTAGCTGACGCCCTCCGCCGCGCCGAGCGAGCCGCCG
GGGCCCGGCGGCAGGCCGCAGCCCGTCGCCTTGAGCGTGTAGAGGGACCACGCCACGGTG
GCGCACGACGCGAGCCCGGCCGCCCCCGCGGCCAGCTCCACGGTGCTGTTGCCGCCGCCG
CTGCTCTCCGCCATGCACGTGACTGGCTGCCGGCGACGGAGGAGGAGGAGGGTGGAGCTG
CCGCGGCGGGCGGGGTTGAGAGTTGTTGTCGTGGATGCCGCCGTGGCGGTGGCGGTGGCT
GGCATGATGGGCCTCAGGGCTAGCGACGCCATGGCTGCCTTGGTTTCTGGCTGGACGAGG
AGAGCTGGTAGAGCTAGACCGGTGGAAGCGATGGGGTTATCCGCTTATCCTCTCGTGGGG
AGCTGCTGGTTAAGACCATGAACGTATCGCGTGCATCGGGGCTTCATCCCAACTCTAGTT
GAATGATCTTTACTTAAAAAGGTCGCCGCTTTATATATAAAGCAACCATTATCAATAATT
TGATACAAACGCGCGCCATCATACATAACATAGGCATTGAGCACAACAACATCACCCGTG
TAACACTACAAGAGCAACCGGGGTCCTTCACCGTGAACACGCCACCACGAAGAGATTAAG
CCGCATACAACGGACTGCGGGCTTTAAGGCAACACATTGAGAAAGACTGCGACTTCGGAG
CGTCGTCACCGTCCGCTTCAAGGATCAGAGTTTTCCTTCGAACAACACGATGGGCAATGA
GAGCTGCAACGATGTCTTGAATAAGGAACGAGCTTCCCGCCACCGGTCTGTCCGAAGGTA
GAACAAGTTTTCACCCCGACCAACACTCACCGCCATCGAACACCACACCCCAGCTAGGAC
GCCGCCCTACACGGTCATGGCCACCGGGCAGCACCGAGCTACGGGCTCTGCCCATGAGCA
CCGTTCTCCCACCACCAGGGCCGCCGCCTTGGCATCCAAGACTCTGACACCAGCCCAATC
GAAACCCGCCGCTACACCAAACAAAGAGACGAGCGGAAATTGATTACCTTCTGAGAAATT
GCANNNNNNNNNNNNCATAGCTTCACAATGGGTACTCGAACATTTTTCGGTAGAATCCCC
CTTAATGCAACCGAAAGTAACTACAACATAATCACGTGACAGTCATGAGACTTTAGGTTT
TAGAATCTTTTCTCTGCCATATTTATTATTTCCTTTATATTCGACGAGAAGTCAGATGTG
ACCTTCATACTGCTCAGGCATTTAAAAAGGATTTCCTTCTCTTCTTTGATAAGAGCGTAG
CTGACAGGACCTTGATACTGCTTTGGTGCATGTCGTCTTTTTTGTTCATACGTTGTTGGT
TTTGCCATGCCTCCGGTGTATATTTTGTCTTCCCATACATGCTCAAAAAGCCTAGCAGGT
TCACACAAAGATTCATCGTCACGTGCATCACGTCGATTGCAGAGCGGACCTCTAGGCTTT
TCAATAAGGTAGCTCCCAAAATATAAATTTCTTCTTTCATATGGGTGCGTGTCCGTTAGC
GTCATTCGGAATAAATTGTTCTCGAGGGCGCTTTCCAAAGATTACTTTTAAATCCTTGAT
CATATCAAATATATCATCACTAATACGGTGGCCAGGCTTTTAAATCCTTTGAAATGCTTG
CCTTTCCTTCTTAAGAGATGCCTGATCAGAAGAAACTGACGATGTCCCGGGTACACATTC
TTCTTACATTTATCCAAATATATACTTACAGTATCATCTAAACAGTGCATGCATTCATTC
TATCCCTTGTTTGTTTGTCCTGAAAGGTTATTAAGAGCAGGCAAATCATTGATGGTTACA
AACAACAACACTCGTAGGTCAACTTCCTCCTATTTATGCTCATTCCACACACATATACCT
TTTCTATCCCCAACTATAAAATTATTCAACTAATGGTCTTAGGTACCCATCAATGTCGTT
GTCGGGTTGCTTAGGGCCTTGGATGAGCAATGTCATCATAATAAACTTTCGCTTCATGCA
CAACAAAGAAGGAAGGTTATAGATACATAGAGTCACATGCTAGGTGTGTTGGGGAACGTT
GCATGG