Contig Data
morexGenes
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Map Locations of contig_68446 (4880 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_68446

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75635 1 1061 bp MLOC_75635.1 Available Available LOC_Os01g26039.1, FRAME:+1, EVALUE:2e-82, 13101.m02756 protein expressed protein





CDS Structure of MLOC_75635






Contig Sequence (4880 bp)

>contig_68446 4880 assembly3_WGSMorex_rbca.fasta
CGAGCGCATCCGCGCGATGTCCGTTTTTCCCAAACCGAACGCAAGTTTGAGACTTTGGGC
TGAGGATGGGTCGAAAACGGATGAAATCCGAACATTTGTCTGTATGGGTCCGCGCGTTGG
GTCGTGGTATTCGTCTGTTCTACTCCGAACGAACGCGTGCAAACAAGATGATGTCGCGTG
ATGGAGTTGGCCTCACAAACGGTTGTGGGAAAGATCGTCAGTCAACAAAGGGACTTATCG
GCGGACGGACAAGTTGTTCGAAAAATCAAGGAACTGCTCTCTCAATTTCAAGTCTCTAAG
AGTTGTACGGGTTGCTGTAAGTCGTCGTGTAAAACGTGGTTTCATGTGACTCGTAGCTCG
AAGATTACGTGCAGAGGGGGCTATGAACAATGAATAAATGAGCAACATTTCCCTCAAAAA
GAAAAGGACATACGTCAGACACGTCTGTTTCTTTAGGGATCCAGACACGTTTATACGTTT
GTGGGAGCTAATACTAGTACACTACATGGGATGGGATTAGAAAAAGGAAAAAGAAAGTTG
GTGCGGTCAGCACTGAGCTTGTCCCCCTTTGTCTGCTTCCCCGGAGAGTGGCTTGCTCTT
GATCTCTCCTACGTGCCCCGCTGCCACCCCAATCACTCGCCGCCCCATCCCCTCCACAGA
CCCCGCCCTTCTTTTCTTCTTCAACTAACTCCTCCGTTTCTCCAACCAAAGGCATCCATC
CGCGCCACTTCCTTCTCCAGCAATGTCCATTCCCGCCCTCCGCTCCTTCCCCGCCGTCTA
CGGCGTGAAGCCGGCCGGCCGCCTGGTCCGACACCATTCCCGGCTCGGCGGCGGCCTCCG
GGCCAGCTCCGTCGCTGTGAACGGGGAGGTGGGGCCGAGAACCAAGGGCGGGAAGAAGGA
AGAACCGGCGAAGGAGGAGGACAGAGGGCTGGAGCCCCTCTACGACGATGGGTTCGGGGG
CGTGACCGTCAAGGACTACTTCGCGGCCGCCAGGGCCCTGTGCAAGGACGACGGAGGGCC
GCCGCGGTGGTTTTGCCCCGTGGAGTCAGGCCAGCCGGCGGTGGAGGACGCGCCCCTGCT
GCTCTTCTTGCCAGGTTGGTCGTCCAATCTCTCGCAATAAACAACTTCTCCATTCAGGTT
GGTCACTGCATGATGGAGGCAGCTCATCAGCGCGAGATCACCTCCATGTTTGCGGTGACC
TGAATGGCTAAATGGAGAGTTTGCTTCTGTTCTAAGAGTGTGCTTCGAATTGACTGGACT
GCAGGAACTGACGGTGTTGGGATGGGACTCATTTTGCACCACAAGTCTTTGGGCAAGTGA
GTATGCTGTTGTATTCAACATACAGTATATACTTTATCTCTGCTATCACCTTTAGCGAAA
TACTATTGCCGGCCAAGCAGGAAAAGCCTGCTTTCAGCGTTACTACTAGTGTGCTAGTCT
CCATGAAGTCATTATTTATCAAATTAATCAGGGCTAAAACAGTAGGGACGCAAACACACA
ACAAGCCTAGATATAATAAGAATATTAAAAGTCAAATATATGCCGATATCAAATGAGATG
TACATAAATTAGACTTTTAGAACACCTATATGCGGGTTGATGTGAGCATCGCTGAAAAAT
CATACTCCCTCCGTACCTAAATATAAGTCTTTTAAGATATTTCACTAAGTATCTACATAC
GGAGCAAAATGAATGAATCTGTACTCTAAATTATATCTATATACATCTGTATGCAGTTCG
TTAGTTGAATCTTTAGAAAGACTTATATTTAGAAACAGAGGGAGTACAAGGCAAGCCTTT
CCCCACAGTGCAATGCAAAGAGCCCACGTCGAACCTGTACCTTTTGGCGCAAGTGGTTCT
GGGTCCGACGTGGCCTCTCCTACCTAAAAGAACATAAATTTTTAATTTATATAAGGATCA
AATATAGCTATGTTCACCTTAAATTCTGTCAAAATTTTGTTCTCGATGTAGAATCAACCA
ATAGATGAAGAAGTGAGAGGGCCATGCATATAGCATTAATATGTTCTCCAATACATAAGT
AGATCTTCTTTGGTTGATGTTATTTGCAAGATGAGTTCAATAAACCTGAAAGGAAGGAAT
AAGCCTACGGAATGTGACCTGCGATATGTTTACATGTTCCTTCTTATTTAGGGGGTGTTT
GTTTTCAGGGACTTTTTGGTATAGGGACTAAAAAAGTCTTTTTTAGTCTCATTTGAAACA
AACAGGAGGGACTTTTAGAGACTAAAAGAGGGTATTTGGGACTAAAGGAAGAAGTTCGTA
TGTGAGGGTCTTTTTGTGACTTTTTTGACACTTTTTCCAACAGTGTCCTTACTTTTAGCA
TGTCATTTAATAATTCTAGTATATTACTACGGGTAACATTGTCTTTTTACATGTCATTTA
ATGACCTCTAGTCCCTGTTTAGTCCATAAAAATAAACGGATAGGGACTAGAGACTTTTTA
ACTGGGACTAAAAAAGTCCTAGAACTCTTGAAACAAACAGTGCCTTAGTCTAAAACTGCC
CAATGTGACAAAGTAGTCTGCCTCCTTTTGTTTGTCGTTTTCTACTTTCAAGTCTAATAA
AACCTCATGTTTCTCGTTTGCAGGGCCTTCGAAGTTCGTTGTTTGCATATACCAGTAAAT
GATCGTACACCATTTGAAGGTATGACTTGTCGTTATTCGGCTTCACTATTATTCCCTCAG
TCCTAAAATAACTCTTTCAAGTTTAGTATAACTTTGTATTAGAGCTAGTATAAAGTTGAC
ACTTATTTTAAGACGAAGGGAGTACTATTCTTTACTTGGATAATCATCGACATACCAACT
TTTCTCTGCAACTATTTTCTAAATAACAACTCACAACAAAGTGGAACATAGAAAATATGC
AGCGATTCTAGAGATATATGTATCTCATTAGGACTACAGTTTCATCCAGGTCTAACTTCA
GAAATTTGCACAAGTTTTTCTTCCAATAATGAAACTTTTACTCCCTCCGTCACGGTTTAA
AAGGCGTGTTTGGAAATTCTCTGGAAGTGGTCATTGATTGGTTGTCACATGGGATAAAAA
ATAGCATTCACACTACGCGTGCATATAAAAATAGTACAATGGAGTACTAATTAGCTGCTN
NNNGTAAATGCAATGCGCCTTAAACCTTATCTATTATGAAAATGCACGTAAGTTTAATTA
AACCTTCTAAACCGTGATGGAGGTAGTATTACCCACGTCCACATCATCGATGCATACAAC
CGCAACTATTACATCATTTATTACAAAAATTCACCAGACAATTGCCTGACCAGGAAAAGA
GAAAGACCAAAACATCAATACATCCCAACCACAGTTGGTACATGGTAGAAACATGCCAAC
GAAGAAAACTCTAAAAACTAAGGAGCCTATCAGTGGCACGCCATACAAACCAGCGCCTAT
TAGTGGTAATGCATTCGAGCTGCTTGGCGCCAACCTCCATCGGCTCCTTGTGCTGCACCC
TCTGTAATAACGCCCATGGCACATGCATACAAGATTGAATTTCATTTGTGTCAACAAAGA
ACATCGTTTCTGCATAGACGAATAGACCAATACAGTGCTGCAACCCCGACCAAAATCAGT
GGTCTTAGAGATTCATCAACTCCCACAATCAAGACCCAAAAGTATGATAAATACTTCAAA
GTGTTGTGATATTAAAGGCCAAGTACACAGTGCACCAAGCTATATGTGACAAACCACAAT
AAAAGAAAAGATGTTGTATAGTTTTCAACCAGTAAAAAAAGCTACAACGTGTATCCCCCT
GCCATTTCCGCTTAATCAAATTGTCCTTTTATAAGAACGACTTTTGTGCAGAGAAACGAG
AGGAATACTTTAGTTTTTAAAGCTAGTTTCAGACGCCATAACTTGATCTAAAACTGACCA
GCATATCCACTAATGCCGAATACATTGAGTGTACAGAAAACACCCAATGGTGTGAAGATC
CCAGTCCTGCTCCTGAGTTAGTTGCACCCCTGCACTCTCAGTATGATCTCATTCCAGTCT
ACTGAATTGACCAGCAAGTTCTCCACTCCGAGGACTGAGGCAACGGTGGTATCCTTACGA
GCAGCCAGTTTCGGTCTGTAAAAAGAGCCAAAAAAAGGCATAATGTTGTCGTCGGGCCAC
TTTCCATCTCTCGATGCCAGGTGATTCTTGACGGTGTTAAATTATTTTTTTATAAAGAGT
ATATTAATATTACAAAGATACCAATTACACCCAACCTCTGCAACAACGCAATGCCCTAAT
GGCATGACGGATGCACACAGCCTAAAAAACGAAGAAGAAGCTAAAAAAGAAAAGTCCCAC
TACAAAGATTCGCATGAGCATTCACATGCTTGGTCTTCGTATCTGGGATGTCCTTTTGGC
GAGGTCTTCTATCCGCCGCACCCCGTTGCCCCTGTGGACCTTTTGGCGAGGTCTTCTATC
CGCCGCACCCCGTTGCCCCTGTGGAGCCCTCACCGCAGAAGGATGACTAAAATAAAATTA
CCGTTTTGAATTATGAAGGAAAATCAGAGATAAGTCCCAAAAGCTTCTATATATTCGTCT
AACAGCAATGAATATAACAAATGCTTACAGGGCTACTACAAATTGTTGAACAATCTATCC
AATATGAGCATGATTTATCACCAAACAGACCAATATATCTTGTTGGAGATTCCTTTGGTG
GATGTCTGGCACTTGCAGCGGCAGCTCGTAATCCAGACATTGATTTGGTCCTCCTACTGG
TAAACCCAGGCAAGTGAAAATGTTGTACTTTAGAATGTGATGAGATAGTTCTTCTAAAAA
ATATACTCCCTCCGTCCCAAAATAAGTGACTCAAAAATGACTCGGTTTTGTACTAACTTT
AGTACAAAGTAGAGTCACTT