morexGenes - Barley RNA-seq Database

Contig contig_68411
Source Contig contig_68411
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_68411 (7637 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_68411

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75626	3	5586 bp	MLOC_75626.1	Available	Available	LOC_Os07g46350.1, FRAME:+2, EVALUE:0.0, 13107.m04885 protein OsSCP40 - Putative Serine Carboxypeptidase homologue, expressed
MLOC_75627	4	1665 bp	MLOC_75627.3	Available	Available	LOC_Os07g46340.1, FRAME:-3, EVALUE:5e-93, 13107.m04882 protein methyltransferase, putative, expressed
CDS Structure of MLOC_75626

CDS Structure of MLOC_75627

Contig Sequence (7637 bp)

>contig_68411 7637 assembly3_WGSMorex_rbca.fasta
CCCTCTCTCCCCCCCCCCCCCCAATCCCCACGCAATGTTTAATAGTTTATAGTAGTAGTA
ATTTAAGAAGTATGTCCGATGAACTGGAGATGATCTTTTTGGCTGATGTTTGATGTCCTT
CTGAAGCTGATTTTGTGTTTGTGCTTTCGATTTTGTTGACCGATGTTTGATCACGTAGAG
TAGCTCAACGCTGCATGGGTAGTATGGATATATGATGCTGGATATGAGATACACGGGTGT
GAACAGGGGAATATGAGGCGCATGTAATCAGTGCCCGTGGACTCGTTCATGGGTTTTTGA
GGGCCCGGATTTGTAAGTTCCGACTATAGATGCTCTAATGGGCTTTGAGAAACCCAACTG
TAGATGCTCTTACAAGTTGCAATTTCACAGCAGTCGTAGTCGATACTACAGTACAACAAG
AAGAAATTCATTACCATGAAAGCAAATGCCTAGTGGACGCATGGACGGATCAAATGGATG
GCCTATCTTGTATCGGATGAGAACCGTGCCACCGGCGGGCTCCTACCTGTCACCATTTCT
CCCACGTCGAAATTCAATTGGTATCCCATCCCCCTCGGATTCCCGCCCTATAAATACCAG
GGCAGAACGACGCAGGCACCCGCCGTCTCCAGTCCAGTCCAGTCCAGTCCAGCGTGCTCG
CTCCGACCGCCCGTCCGATCGAGCAGAACCGGCGCGAGCAGCGCAGTCACGCGCCATGAA
GTGCACAGTGGTGGCACTCGTGCTGCTGGTGGCGGTGCAATGCCTCGTGCTGGGCGCCGG
CCCGGCCGCGGCGGCGAAGGCGCGGCGGACGCGGCAGGGCGACTACCTGAACCGGCTGCG
GGGCTCGCCATCCTCCCGCGCGTCGTGGGAGTCGCTGGCGGCAGTGGAGGAGCAGACGAC
GACGAAGGCGGCGGGTAGACCCGCGCCGGTGGCCGCTGCGGTGGAGGCTGGGAGGAAGGA
GGCCGACCGCGTGGAGGCGCTGCCCGGGCAGCCGCGCGGCGTGGACTTCGCGCAGTACGC
CGGCTACGTGACGGTGGACGCGGCGGCCGGGCGTGCGCTGTTCTACTACCTCGCCGAGGC
CGTCGGCGGCAACGGCGACAAGCCCAAGCCCCTCCTCCTGTGGCTCAACGGTGGCCCCGG
GTGCTCGTCGCTGGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGTCATGAGCGA
CGGCAAGACGCTCTACAGCAACCCCTACTCCTGGAACCACGGTAAGCAGTCGCCACGCTC
TGGAGTTCACCTCATGTCGGCTCCGGCCTGCGAGCCATTGACAGTTACTGTCTTACTGAG
AAGACAAGCGATCTATCGGGTGACTAATTAATGGTGCAGCGGCGAACGTGCTGTTCCTGG
AGAGCCCGGCGGGGGTGGGGTACTCGTACTCGAACACGACGGCGGACTACGGCAGGAGCG
GGGACAACGGGACGGCGGAGGACGCGTACCAGTTCCTGGCCAACTGGCTGGAGCGCTTCC
CGGAGTACAAGGGCCGCGAGTTCTACATCACCGGCGAGAGCTACGCCGGCCACTACGTCC
CGCAGCTGGCCCACGCCATCCTCCGCCACGCATCCCCGGCCATCAACCTCAAAGGCATCA
TGGTAAGCAACCACTAGTAATTCTCTAGCGGGAAAACGCAACCGTCAACCTCAGAGTCTT
GTGAGTTCTCACTGCTGACCACGGTTTGGGTGGGACGGGTTGGAAACAGATTGGGAACGC
GGTGATCAACGACTGGACGGACAGCAAGGGCATGTACGACTTCTTCTGGACGCACGCGCT
CATCTCCGACGAGACGGCCGACGGCATCAGCAAGAACTGCAACTTCACGGCCTACGGCGC
CGGCGTGGCGTCGAACGCGCTCTGCGACGCCGCCTCGGACGAGGTCGGCGAGAGCCTCGC
GGACATCGACATCTACAACATCTACGCGCCCAACTGCCAGTCGGAGAAGCTCGTCACGCC
GCCCATCGCCCCCTCGGTACGTACGTGCGTGCCTTTCCAACACATCCAACACCACAGCCG
GTACAGCAGTAGCGCCGTACTGTACCACCAGTGCCAACTGCTAAATGATCCATGAGGCTA
GTTAGTTAGATCATGATCACAGGGGATGCTGATTGGTTAGTATAATTATTAAGTTTGCTT
GGGTTCTACGTGTGGCTGGCCAGATCGACAACTTTGATCCGTGCACGGACTACTACGTGG
AGGCGTACCTCAACCGGCCGGACGTGCAGAAGGCGCTGCACGCCAACGTCACCCGCCTCG
ACCACCCCTGGTCAGCCTGCAGGTATGGTACCTACTTATCGCTTTTTTTTTCCTCACAAC
GTAGGTGCCTGGAGACGGACTCCTCTCTGATTTATGTAATAAGAAGAAAAGAAAAAATAT
GAAGATAAAGACTTCATCTCCATCTCTCATTATCTTGGACGAAAAATATCTCAAGTGCGC
TGGCCGTCGCTTGCATCAACCAGAGCCTCGCGATCCCTTAGGCAACGACGGCACAAGTGT
TAGTGATGACCCGGGAAGCACAGCACGGTGTGGCGCACAATCAAGCTGAGACCGACCGAT
CGAGGAAACCCAATCAGGGGTCGACATGGCACCGCATTATTGGAGTTTCTTTTGTGCGAC
ATGTCTCAACTACTAAGGTACTAACCGGGTTGTTTGCTTTAGCGTGCTGCACAACCTGGA
GGAGGATGCAATCATATATATATATATATATATATCGATTGATTCCAATGAACCCTCGCT
CACGCTAACCACACACCGCACACCACACTAATCAATACCCTTGCACGAAAAGCGTTCACC
CACCAGACCAGTTTAGAGTTCAGACCAACACTTTATCCTATACCAATGCAATATCCCACG
CAACAAGATCTAGATGATGCAGTAACTATTGTATGTATGCCTAGGGGTAGGTGCATCACA
AGGAAGTAGATGCAAACTTGCAAGCAATGTGGTAATTCAATACTAGCTAGTATATACTGT
AAAGGCTGGTTGGTTGCTCAAACTTGCAGCACATGGTCTAGATGTGGATCAACGAGTTTG
CGTCCGGTCCGGATTCCTGGATTTCTTCGGGTTAATAATTAACATATGAGAAGATAGGTC
ATGCGTGGTACCAGCACCATCGATCTTAATACTAGTTAACATTGCGCGTTCTCGAGGAAA
GATACACTCATACTTACCATTATGCCAAGATGTGATGGTGTTATCACCTGCATCTCCTGC
CTATTACTAGTTTTATCCCATTCATGCCGTGATCCCTTTGCACATGGCGAATTGCACCTA
CCACCATATGTTCTTGCTTTCTTTAAGTTTGTGCACATGCATTTGTGCAACATGGCGTTG
AATTATTAGGGGGTTCCGTTTGAGTCTTGCTAAGTTGCCCACGCCGATTACTGGGTGGCC
CATGTGCAATCACATCCTTTCAATCTAGATCATGACATTGACGGATCAAGTTTTTTTTTT
CTTCGAACCGTGGCGTAATTCACAAAACATTCCATTTATTTTGTTTTTCAGTGACGTCTT
GACACGCTGGGTCGACAGCGCCAAAACTGTCCTGCCTATTATCCAGGAGCTGATGAAGAA
CAGCATCCGGGTCTGGGTTTACAGGTATGCAAGATGTGCATTTCCAGACGATGCTTAATT
AGAGTGTGTGATGTGACATTCCAGAACAGAAGTGAAATGGTTTGTGCTATACATGCAATG
CAATGAAATCTGAATACGATGGCCGCTGACCTTTTGTTTGCAGTGGAGACACTGATGGGA
GAGTGCCCGTCACTTCCAGTAGACTCTCTGTCAACCAGCTCCAGCTCCCTGTGGCGGCAA
AATGGAGGCCATGGTTCAGCAGCACCAAGGTGCTCACCTGCACTCATTTTTCCCCTGCCC
AAATCTTTTAACTGCAACAAGCTAACACGGCAAATTATAACTAACACTCATAATTCAGTT
GCTAGAGAAGAGTTTGAACCCTGATAATAAAATCGGGAGAATTTGAAACCTTGAAGCTCC
CGTACCATGAATATTACATGCTTTTGCTCGGACTCGGCAAGCATAATGATCTGTTCAATC
TTGTGAAACAGGGTGCCGGAGAGGTGGGTGGATACATTGTGCAGTACAAGGGCGACCTCA
GCTTGGTAACTGTTAGAGGAGCAGGCCATGAGGTCCCCAGCTACCAGCCGCGGCGAGCGC
TTGTGCTTGTCCAGAATTTCCTCGCAGGCAAAGCGCTCCCTGACTGCAAAGAATGCGAAC
AGGATTAGCAAAAGAAAAGAAGGTTTTACACTAAAAGATAGTACACCAGCAGGTTTCACA
GGTTGTATCATTTGATTCAGTACAAGAAACAAGCAAAATCAAGTAAAGTTAGATACAGAA
ACCCATCATCAACCCATGCACTCCGCAGACCATGTAACTGCAGGTCAGCAAATGCTTTCA
TATAGATAGGAAAGTGTATGGTGTAATTTGTTAAGTATGAACATCTATGCCAAAATGGCA
TGTTGCAATACTGGTGCCTCCAAAGGATGCTGCGCCTCCATGTGTTACAATGACTTACCA
GGAGAATGAAATTCATATATTGGCTCCAAACCAAGGGATACTGTAAACTCTGTAATCACA
AGCTGCATGGTTTCAGTTGCTGTATCAATTTCATTTAGTACAAGAAACAAGCAAAATCGA
GTGAAATAAGATACAGAAAGCCATCCAAGTATCAAACCTACGCATTTCGCAGATCATGAA
GCTGCAGGCCAGCAAAATGGTTTTGCTTAGATAGAGAGTATGTATGATGGAATTTATCAA
GTTTGAATAGTGATTGCCAAACTCGCATGCTGAAAAGCTTGGACCTCCATGTGTTACAAT
GACTAACCTGGAGAATGAAATTTATATCTTGGTAACAAAGCAATGATACTAGTACAAAAT
CTGAGTATTTGCCTTCCATGTGCTGAGAAGCATAATAAAAGCACTGCAACTTTCAATATG
ACTAAGCCTCAGATATCTCAAGGCATCAGCAACAAGAAATTTTGCCGAAACAGTAGATAC
TCCTTGAAAAAACTGATGGTGTTTTTACTTCCACGCAAACAAAATACAATCAATGAATAA
TGACAATTTCTTTTCTATTGCACCGAGGATGAAACTGGGACAGATTATATTCCTCAAATG
TGCCAAACAATCATATCCTCAGCACCGCATTACAACCAGTGGTAACACAATATAATGACT
TGATGATTCTTACAAGATCACTGAAAAAAATGTATACTCGTGCAAAGACACACTTTCTAT
TTTTGGATGGCCATTATGGTGGCAGCATCACGCTGTCTGATCTTGTAAGGATCACAACAA
TGCACAAATGTTGTGACATAAATTATCCTACAGCTCAACCGGAATCTTGCAACTTCGAGT
GGTTTAAGGTTGGAGAATCTATCCCTGTCCTTGGCCCTTTTTGCAGACATAAATATAATG
AGAGTCAGGGTCCTCCAGAACAAAGCCCTCAGGCAATCTACCGCTCTTAGTCAGTGGAAC
AGGATCGAAGAAAGACCTTGTTGTGTTCCCCTTGAATCCAGGTCTTGCTGCAATGCATTA
AAAAATGATCATGCTACCAGTTCTGTTTTAACCTTACAAGTAAAGTTCTTATGAACTACA
CTACTGTGAATTCAGTGGTGTTGATTACACAAGTTAAAGCTCGAATTTGCACAAAACGTG
GGGTAAACCCTATTCGTGAGCAAGCAAACAGAGATTCTATTTTTATTAAGCAGAGAAAGT
TTTCAACATTGCGGACTAAGAAATGAACATGTCTGCAAAGTGACATGATACTAATACGTA
CGCAGAATGTACAGTACAGTATTCCAACTGCATACTGGTTGGTTCAAGTGAGGAATTCGC
GCTGACGGGTCACCATAAGTTATCTAGCAGTTCAGAAACAAAAATTGATCATTATAATCA
GTGGCAGGAAATGACATATTAAGGATGCACTACGAAGAAACTTATTCAAACTGCATACCA
ACATAAAGACTCCCCCTGGTTTAAGTAGCCTACAGTCAGAAGATAACACTCATAAGAATG
CAGAAATGCTGAACTTAACAATATATTAGCGCACATGAGACTGCAAGTGATACTTCAATG
GGGGTCAAAGTATTAAGAACCTGTCCACTTCCAGGACCATCTGAGCTGCGCTGAGAGGAG
CCTCCACACCACACTGTGGAAGTAGCACGACCGCAATGTTGAAGAAGTACCAAAATAAGC
AAAAGACACAATGACTGAATGTTACCACTTACCATCAACGAGTCCAAAGTACCTTCAAGA
AATGCACAAAAAGAACAAGCGACATTAAGCAAAGTGTGCCAATAGACTCAATACTTATTA
GAAAGCCACTGTAGCATGAAGAAACTCACACCTTTATCGATGGCACAATCAAATGATTCG
TCAGAAAATTTACTCATATCTCTAACATCCATTTGCATGTCTATAGCTCATAAGGAAATC
AACAGAAACTAGATTTCACTTCCCGGACAAAGAGGGAATTTAAAATATTTAAGGATACAT
TGTAGCTGTGGAAGATCGAAGTACTTCTTTCTCATCATCTCAATTAAAACCGAAGAAATG
TCAATGTTTATTATCTCCATGTAGCCATCAGCGGCCATATCCTCTGACATAACTGCAAAC
AGCAGAGCATGGGAAGAAAATTTAAATTAGCACAGGGAGTGTAATCATCGAGCCTAGATT
TAGAAGCGCATCCTAAACTCTATCCAGAAGACCAGAACAGCCCATCGAGGGTGCAAAACT
CAACCCCCAGTGTGTATGCATAAGCATTGAAATATCAGTAACACGGATATGACTAATGTA
ACACAATAGGACACAACGTTCACACAAGTAGTGAAAATCAGATGTGCTGCCGTGTGTTTA
ACGTGTCGATGCAGTATAGATGGCCTGCACCATAATACTAAATCCCAGAGCAACTTTGGG
TTACTGGGGAACAAGTCAGATCAAGGTTGGTTTTTGTTTGGACTATTATCGAACAGAGCT
GTGCTGGTTTCAGATGTGTGCTTCCATATTACTGTCCCTACCCCATTTGGCCATGCCAGT
TCGCAATGACTGCTTTTGTGTGGCATCAACATCACAACCCTGTCAATTCACACATTGCCA
AACTGTAGCAGCATAGCACATTACCCCATCCAGAGTATAATTATCAGATTACTGGAAGTG
ATATATGTCAGCATGTGGACTGATAGAATGGCATTATCTGATTGCCATGTCGTTATAAAC
AGAACAGATGCAGGAAGCATTGCAGCTAAATCACCACCTAGCCGAGGAGCTATCCACAAA
CTATTGCCGTGACAGCAATTTCGACCCCAACAGACGGTGACTGTGCTCTGTGCAAGCAGC
TAATCCAAAAGATCACTCGCTCGTTCGCTGGCCCGTGCCAATCACCCCCAGCCCTTCACA
AATCACAATCAAGCACCTATTTGAACGGAACCTGAAAAGGCGGAGAGGAAAAGGAAAGGA
AATTTCTACTTCCGGAAAACAGAGACGAATGCACAAGCAGTCAAGCACCACCACCACGGC
ACAAATCAGCTACTCCAGTTCGGGCACTAGGCGAGCGGCAGTCTCGTCTATGCGGAGCAA
TCGTGAGGGGGAGAGCG