Contig Data
morexGenes
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Map Locations of contig_68314 (4548 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_68314

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75601 1 1465 bp MLOC_75601.1 Available Available LOC_Os02g43940.1, FRAME:+2, EVALUE:8e-46, 13102.m04889 protein AP2 domain containing protein, expressed
MLOC_75600 1 726 bp AK252401.1 Available Available None





CDS Structure of MLOC_75601






CDS Structure of MLOC_75600






Contig Sequence (4548 bp)

>contig_68314 4548 assembly3_WGSMorex_rbca.fasta
TTTTACCCACACAAGTGTCAAATGCACACATTTTTACATTTGGTTCAAGCACTCAACACT
TACATGCACATAGTATCTAGGTGTATCCTTCTAATGACGCCAATTCATGCTTTTGCAGCC
TGATACAGTAACAGGAGACATAGTTGTTGTCTTGCAACTTAAAGAGCACCCAAAATTCAA
GAGGAAGTCGGATGACCTGTTCGTTGAGCATGCGATCTCTCTGACTGAGGCTCTCTGTGG
CTTCCAGTTTGTTCTGACCCATCTTGATGGTCGACAGCTTCTGATCAAATCCAATCCTGG
GGAGATCATAAAGCCTGGTACATGAATTTCCTCTTGTATTTCTGTTTTTCCTTGTTCCTT
CCGAGTTCCTCTATCCTGCCGCGATAGAGTTTCCCCCTGTTTGGAACATAGTGATATAAT
CTTTTGTTCTGGAAAACAGGTCAGCACAAGGCCATAAATGACGAGGGCATGCCTCGGCAT
GGCCGGCCTTTCATGAAGGGTCGCCTGTTCGTCGAGTTCAGCGTGGAGTTCCCTGAGCCT
GGAGTACTGACCCCTAGCCAATGCAAGTCACTTGAGAAGATCCTGCCGCCAAGACCAGGG
AGCCAGTCGTCGGACATGGACGTGGATCAGTGCGAGGAAACGACCATGCACGACGTGAAC
ATAGAAGAGGAGATGAGACGCAGGCAGCATCAAAGGCGGCAAGAAGCATACGATGAAGAA
GATGAGGATGAAGGCGGTGCCCCAAGGGGGGTGCAGTGCGCCCAGCAGTAGGAAACAAGG
ATGTCGATCAACTACATTCTACTATTGCTCCTTTCCCGTTTAATTAAAGTACTCCTAGCT
GATCTGATGCGCGGTATTATTATTGTTGGCGTCCTAAGATTATGAGGTTGTTAGCCATAA
GTATCATTCATCCTTTTGTTGGGCCTATTGCCTGCTGTGTCGTGTACCGGTATTATTTTG
GAGCCCATACTTTGATATTTCAGACTTGGTTGGGTGAATTCGTCTTTGTGTGTGCTGGTG
CTGCATTATTATTATTATTATATTTGTAATCTTCGTGCTGCTCAGCAACTTGAGGCCTTG
CTACTATTTGTATCAGATCTGTCAGTGAGGGTCATTAGTATGAGTGGAACGTGTTGATGG
AATTTACTCTTACCAATGCCATCCTCGATGGCATCTCGGCACCAATAGTGAAGCGAAGAC
TTTGCCGGTTGAAGCAGATGCAATCGCCAGGCGACGCGCCACCGTTCCTTCCAGGCTCTT
GCTTGAACCACGGCCGGTGTGGCACCGCATTGCCGTTCGCACATCGTTGTTAACGAAGTC
CTTGAGTTGTACCAGCAAGCAGTCCGGTCCAGCACAAGTTGGCGCACGAAATAGTAACCA
CCTTCCTGCAGGAAGGAAGGTGCTGGCTGGTTAAACCAAGCGGCCTGATTGATTGAAGGG
GTCTTGTTCTCAGTGACATCTACTTAACGGCTAGTTGTTGAGGTGTAGTCTTCGTCTCTG
AGGACATCAGCCTCTCCTCCAAGCTCGCGTGACCGGGCCGGTCGTCCATGTAAAAGAAGA
CAATTATCATTTGGCCGGGCTGCATATATGCTGCTCATACAACTGGAGTTGTGAACTGGC
CAGTATTTGGACGGTCGCTGTTTGGTTATGTCTACTACCCAACTATATATCGTTGCCAAT
GCAGGCCATCCATGTGTTGGAGGCCACACCAGCTTGCAAATATCTAACTAGCCGCAGAAT
TCCCCACGTATTTGTTAATTCCGGAGATCCTAACAACAACATCAGCTTTATTTCTTTTCT
AGCTCCGCATGGTGGCGATATCTTTTGTTTATGCAGAGAAGGAAAATAAACGTAGGCCTC
CACTAATCAATCCACTATTTATAGCCGCGCGCACCACCTTCCCTCCCCAGCCTTGAGCCT
TGTCTGGTGCTTGTAGTTGTAGAAAGGAAGGACTCGAGCCATGGAGTCTGACACGATCCA
TGCACCCGCCACCTCCTCTTCCTCCTCCTCCCACTCTTCCGGCTCGACTGTCATCAATGG
CGTACAGGATGTGTCCGCCAAGCATCTGAAGCGCAAGAGACAGACCGCCACCTCTCCTGC
TCCCGGCACCGGAAGCCAAGGGACGTCGGAGGCCGCCGACGGCGCCCGGGGGGAGGAGAG
CAGCAGCTGCGCCGCCGCGGCGGACGAGCGCACGGCCGGTAGGCACCCGTCGTACCGCGG
CGTGCGGCGCCGGAGCTGGGGCAAGTGGGTGTCGGAGATCCGAGAGCCGCGCAAGAAGTC
GCGCATCTGGCTCGGCACGTTCCCGACCGCCGAGATGGCCGCGCGCGCGCACGACGTGGC
CGCGGTCGCCATCAAGGGCCGCCGCGCGCACCTCAACTTCCCGCACCTCGCCCACGCGCT
CCCCCGTCCGGCTTCCACCTCGCCCGCCGACATCCAGGCCGCGGCCGCCTTGGCCGCCGC
CCAATGCGAGTCTTCCTCCTCCGTCGCCGAGACCACGGAGACGTCGACGACATCGACGGA
GAAGGAGAACTCGACATCGGCCGCGAGCTCCGGTGAGGCCGGCAGCGGCGAGGAGAACGC
TCTGTTCGACCTGCCCGACCTTCTGCTGGACCTGAGGGACGGCCTCTGGTGCTCGCCGAC
CTGGGCGTCGGCCGCCGACGACTACGACGGCGGCGAAGCCGCCATGCACGAGCCGCTCCT
GTGGGTGGAGCAGTGCTGGACCTAGCCGCTCCGTTCGAACGCGCGGACCATGACTGGCCA
GAAGAGAACACCGGTGGACACTGGCATGTAGCCATGTACTAGCAGTATTTCATTTTTCCA
ATTAGGTTAAGCTTTGCTTCGCGCCATGCCTCGGTTGCCATCCTGGGGTGGCAAGTCGTT
CTAGCTAGACGTTTCACCGTTTTCCCCACGGTGTGTGTTGTATCCGGAATGTGAAATACA
ATACCCTCACAAAAGAAAAAGAAAAAAAGATGAAATACAATTTACCTCTTCAGCCTCAAA
ATCTCAAACATTTGATTAATCATGGATGATATTGACCTTTTGTTTAACAAAGGTATACAA
TGGAGAGCAAGTCAACGTTTCGAATGTACACGATGGCCGGATCGAGTAGCCCAACCCCAC
GCCCGCCCTCCCAAGCGACACGGGGAACCCTAATCATGCCTCCAATAACCTCTACACCCC
CTCCCGCTCATGTCGCCATGTCGAAGGGCTGGCGAAGTCCATGTGCGCCCAAGGATGGTG
GTGGCGGGGCGTTATGTCCTCGATGTGGTGTCGTTGCGCAGGCATGATGACCGCCCGATG
ATGTGGAACTATTCTTTGGAGGAGGCGTATTGCTGCTTGGTTGAGGAATGCTAGTGGTTG
TTCAGTGACAGTTGCTGCAGGCGATGAAGATGGGTCCGTGGCAGTAGGTGGTCGGCAGCG
AGGTTCGGGCTCCTTGTTTTCGTTCGACTACCGAGTGATGCGCAAATCTAGGCTGCTATC
GGCCGTGCCCATTGGTGTCAGCAAGTACATTGTGTAGGGGCTAAGCCAATGGAGGTTGCT
GCAGGTGTCGGTGCGGCGGCCAAGGCTGATCCAGCCTTCTGTTGGCGTTGGTGCTCGAGG
TGAGTGGTTGTCCCTGCGGTGGTCTCCTTTTGGACTTGGTGAGGATGCTGGCTGCGGTAT
GACACGAGGGTGTTGAGGTCTCGCGCTTATGTGCTTGCCGGACTTGAGATCGTCATGCTG
CGGTATGGTGCAGGATGCGATTCATCATGCGTAAGTCTTGTCCTACTTGTAAACTGCGTT
GGGAGTTTTCCCGAAGAGGAGGGGAGATACATCGCAGTAGAGATAAGTATTTTCCTCAGT
GAGAACCAATGTTATCGAACCAATAGAAGGACCACACAAACGCCTATCTTCAGCGCATAC
ACACAAAAGAGCAAGCACTTGCATCCAACGCGGGGAAGAGGGTTGTCAATCCCCTTAAAC
TCGTTACTTGCAAGCGATAAGTAATGATAGATAGATATATATAACATAAATATATTAAAT
ATAAAAAAAATAAATGCAAATAATAAAAGGCAATGACGTATTTTTGTATTTTTGTATTTT
AGTAATATATTTGCAAAGACCCGGGAGCCATAGTTTTTGCTAGAGCCTTCTCTTTCATAG
AAAGCATACGATGGGTAAACAAATTACAGTTGGACAATTGATAGAAAAACACATGATTAT
GCAATATTTAATCATGACAATGATCACATATATAGGCATCACGCCCATAAGCAAGTAAAC
CGACTCTGTAGGATCGAAAGTATGTCTAGAGGGGGGTGGGGGGATGATAGACTACTTGAC
CAATTAAAATTTAGCCTGTTCCCAATTTTAGTTGTGGGCAAGTCTTAGCAATTATGGCAA
GTCAAGTACACCCTACATATGCACATGTAAGAGTATATCATCGGAATGTAAAACATGCAA
GAGTAAAGTAAATGAGTAAGGTAGGGAGGTCAAACGCAAGAGGTTGACACAACACTTTTT
GGCATGCACTACTGGAATCAGAGATTTTGCCGTCTGCTGGCTGATGGC