| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_68202
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_75554 |
2 |
2282 bp |
MLOC_75554.1 |
Available |
Available |
LOC_Os01g54930.1, FRAME:+2, EVALUE:0.0, 13101.m05774 protein one zinc finger protein, putative, expressed |
| MLOC_75555 |
1 |
664 bp |
MLOC_75555.1 |
Available |
Available |
LOC_Os08g15170.1, FRAME:-2, EVALUE:3e-31, 13108.m01621 protein ATP synthase epsilon chain, mitochondrial, putative, expressed |
CDS Structure of MLOC_75554
CDS Structure of MLOC_75555
Contig Sequence (10281 bp)
>contig_68202 10281 assembly3_WGSMorex_rbca.fasta
AAATCTCCTCCCGGAGATGGACATCACCATGATAGGTCTTCGTGTGCGTATGAAATTATT
TGTTTCTCATGCAACGTTCCCCAACAGTAAGCCATGATGGAATAGACATGATTGCTTCTC
CTGGACCCTTCGTGGGTGGAGCCCTTCATGGACTCGCACAACCATTACCCTATGTGGGTT
GAAGTCTCCATCAACTTGGAAGTACGATGGCACCATCTATCGGAACCACGTCAAAAATTG
TCGTGTCTTCATTGTGTTTGATCTTCCTATCTTTACCCTCTACTTACACTTGCATGTCTT
TACTTTCCACTGCTATACTCATAGACTTGCATCTGTAGGGTGTGCTAGACTTGGTAAAAT
TGCTAAAAACTTGTCCACCGATAAAATTGGAAAAAGGTTAAGTTTTTATGTGATCAAGTA
GTCTAATCCCCCCTTTAGACCTACTTTGGATCCTACAGTAGGCGATCGCAGACGTCATCA
GCCGTGCCGTCGTCGCGGCTCGCATCTCGCTGCAAGGACCACGGGGTCGGGCCATCCACG
TTCGACACCGTCGACACAACGAACTCCAACGAGGAAGAGTAGGATGTGGGATGCCGCCAT
GGCTTGGGTCCGAGGAGGGCCACGACCCACGGCTCATTCTTCCCCTTCGCAACTCCACTT
TTGGGAGCTCACGGGCTATGACCTTGCCGGGCATGGGGAAGACATGACGTTGGATACGGA
TGTAGCCACGGTCGGCAATCATTTGAATTAGGTTAAACAAAAAGTCTTTTGTTTATAGTT
GAAATATAATGAACTTGGTCCGGTTGCATGAAATCATCCGGTTTACCCATACCCCATTTA
AAATGTATGCCGGTATGTTGAATGACCAACTTCCGTATTAGGGTATGTATAATGGTGCTA
TCTTAGGAGTGCCACATAGGATAAATGATGAGGTGGAGGAGAGAGAACTCGAAAAAAAGG
TTTTGCCTTCTCTTATTTAAGAAAAGACAAGAGGTGATCTCTTAACACAATATGTCTCAC
CATGTTTTTAGAAATAGCTAATTATAGAAGATAAGATTAAGAGATGACTATTGTAGACTT
TTTTTGTCATCCATAAATTACATGTAAGATTTAAAATAAAACTATCTTATCAACCCTTGT
ACATGCCCTTACCGTGCACAAACGCGTGTGTGGATGGATACTAATATCCGTTTTAGGGGT
CCGCATTGCAGTGTGCCAACTCCTGTGTCTTTGGTCACCACACAAGTTGACACGGATTCA
TTTCGAGAAAGCAGGGATTTGAGACGGTTTGAAAAGGTGAGATTCGAACGACAAAAGGAG
AAATAGAAACGTCTCATCCCACATGAAGAGGGAAGACGAACCTGGCCACCAGAGACAGAC
GCGGCGAGGCGAGGCGACGAAGCAAAATCGAAGAGGCAAGCGAAGGCTGCCGGGCGACGG
GGCGAGCGAGTCCACCGCATGACACTGTTTTACCGGACGACGCTGTCGACTTTGACGACG
AGTCGTGGATTCCTGCCTATCTACTCCGTCCGGCGGGCCCATCCCCCGCCTCCCTTTTGC
CGCGGCCGTCGCTTTTCAGCGAGCCGACCCAGCAAAGTGGCAGCCATACCGAGCGAGCGA
GCGAGCGAGAGAGAGAGAGAGAAAGAAAAGGACACCAAATTATACGAGCATCTCTCCTCT
CGTCGCGCAAAGCGAGGGAGAGGCCGCCGCACGGCTCGGCCCCCATCCACTCCCTCCCTC
CCTCCCTCCGCCGCGCCGACCGACCGGTCGGGGACGGCGCGCGCGTCGGCGATGCGGAAG
GGCTCGTCGCGGTCGGGGTCGGCGCGGCACCAGCAGTTCCGCGCCCGCGCCAAGACCCGC
GTCGACGACCTCCAGGACATGTTCTCCGGCCTCCAGTACGCCCGCAAGGAGGCCCGCTCC
ACCGACGCCGTCCTCCTCGAGGCGCAGCTCCACCAGATGCTCCGCGAGTGGCGCGCCGAG
CTCAGCGTCCCGTCCCCCGCCTCCTCCCTCCAGGCGGTACGCTCCCTCCCTCCCTTTCCC
CCTCTTCCGTTCCTCCGCCGTGTTGTTTTTGCTGGTGTTTGATTGGGTGGCTGTGGTCGG
CGGCGCGGCAGGGGAACGACAACCGGGACCAGTCGGATCCGCCGTCCGAGACACCGCGGC
CGCCGCAGCTGGCGGCGGCCGAGGAGGAGGACGACGCCACCAGCCAGCTCGTCGAGCAGC
TGCCCCGGCCGTCTGCTGATCAGGCCCGCAGGCACCCGCAGGGGGGAGACCACGACATGA
AGCCGGAGCCGCGCGAGGAAGCGATCGCGGATCCAGTGACGGTGGCGCAGCAGCCGCCGT
CGCTGGGTCAGGGGGTTATGGCCACTCCTGCTACTGCCGTGTTCCACGATCAGGTAGTCT
TAATAAGCTGTTGTTAACAGTTTGCTACTGTACTTGTGGCTGTGTTTTCTAGGCAGCGGA
GGTGCGCTTGTTATAGCTTTGTGACAGTTTGCTACTGTGAATGTGTGATCCGTGGTCTTT
AGATTATGTGTATACATTATAGTTGGATATATATATATGATGTGGACCTGATAGCAACTA
CCCTCCAGTTAGTCATCTGGTGAGGATTCTGCATTTCCTATGGAAAATAATAATAATCAA
GTGTTCGTGGGGAATGACATGGGGCTCTATATCCTGATCAGTTCATCAGAATCACAAATA
TTCAAATTTGAATTTATATGGAGACCCGTGATGGATGTGCATATCAATATAGGTTGTCTT
CAGTCTAGAGGTAAAATTAGAAATTTCTATATAATATAAGGCTTGAGCTACTGCCTTTGG
TGATTTGGCTTGTTTTCCAATCTCATTGCAGTGATACTGATAGACCGGATCTAGTTGGCT
TATTACTTTATTTTGGGGTAAAAATATGTGATTTACAACCACAATGGACAATATGTGGCT
CCAGGAGTTGCATAGTTCTTACTATTCCTTCTTGTCTTCAACTTATGTTTGTTAAATTAG
TTTGTATCTTCGATGCCGTCAGTTAAATCAAGCCTGTACAAGCGTTCTGTGCTTCTGTGC
TCAAAATCGTAGCTTAAGAGTAAACTTTTATTCTTTGGCAATAGATTTTGCCTTTGAACT
AAGTGTAAGACATAGTAAAGTACTAAACTCTACCGTTCTTCTATCCTTTCATTAACATGA
GCATGAAAGGGCTGTATGGCAGGCGCTCTTGAAGGATCATCAGGTTAGCCAGTAACATAG
GAGAGGACTTACCACGGCTGTGCTCTGGGCCAAATAGATTAGCAGCTGGTAAGGCCGGGG
GCATCTTGAGATATCGATGAAAGCATAGTATAACAGTTTTCACAAACGGTTCTACGGCTC
TATCCTTTCGCTGGTCTTGGATAATAATTACCTACCTAGTTTTACAATTTTGCATTACAT
CTATATAACAGTAATAGATTCCCGCAGACTGCAAAGCCACTGAGCTTTAGGTCTGATCCT
GTAATCCATGCTCCATTTAGTCAGAGTACAGCCCCCAGGTGGTTGCAATTTTTATGTCTA
GCATAAAATTGAACTCGAGAATATGCTTGTTCATATATCTCATAGAAACCGTTCTGCGCT
ATGTCTAGATGCTGATTAAGGGACTGGTAGCCAACTGGAATTCCAATAGTTAAGAAATTA
CTTGATATCTCAAGGGTGCTTCTTGTAATTGGGTGTAAATACTGGTTAGCTAAGCTGATT
TATAGTGTACTTTACTATGCAAAGACACATGGAGAAGAAAACTAAAGCCTTTTGGTGGTG
TACAGGAGTACTTTGCTTTTCTATTACAATTGCTTAGCTATGAAGTTAGCTGAAATTCTT
CATGATTGCTTCTAGCACATGGATCTGAAACCATCCGGGTTAGTTCAGACTATTGTTAGT
GTATTTGGTGAGTTCTAAAATATTTAGTTTTGTTAAGCTGATCTGCAGTATATTTGGAGA
CAAAAAAAGTAAGTTTTTTGGTCTTTAACCATCTCATGGGGTACAAGGGTGCTTTGTTTT
TCATCTTAAATTAGGATATCATCCATTTTAGTTTCATTTTCTGCCTGCTTCTCTACCCCT
TAGCTTGCTCATGTGATACCCCTGCTGATGTTTTTCTTCTTCTGCTGTGCGCTGCCTTAT
ACTTAACTTTGGCACCAGCACATACACGATAAGCGCAGACACTGGTCAAAGTTTTTGTAG
AAGTAGCAGTATCTACTTCATTCAGTTAGGGATGGGAAAAACCCTGCAAACCAAAGGATG
GTTCTAAAGGATGAGGAGCAAGGAAAAAGGGATCAATCAACGTTGGATACTTCCTCTAGT
AGTCTAGCAAAATCAAATATCACGCCAAATTTCAGAAGTGGAGGCAACAACGGGATCCTA
ACTTTCTGCCCCCTGCCTTATTCACGCTAGAAGATCTTGCACAGGGACTTCCTTATTTTG
AAAAAAGAAACAATTCCTTACCATCTGAAGTCGCCATACTTAGCCTTTTTAGACATCCTC
TATCTACTGCTTGCTTCTGCTCATGAACCACAAGTCCACAAGAAGATTGGAGCTGGGTTC
TCCCAGTCCAGCAGTCCCAGATGTCCAGACTGAAGCCTGCTGATCTTGACCATAAAAGCC
TCCCTGCAAAACCTTTCTTACCAAGCTCAAGCTGCATTCAAGAAGAGTGGTATTTCCAGC
TTTGTGCGACACAGCTGGCAAAAATAGTTATTGGATGTAGGTGGACGCGGATGCGGCCGC
GGTCGCCTGCATTCCTTGCACGAGCTACCAAATGTGGGTTTTTTAATTTGGTTTGAATCA
AACCAAGGAAATTCATGTTGTACATGGATTTTTCTTTTATACTTGTGCACATAGGGTGAA
ACATCACACAACCTTGTACCTCTGCCCTGGGATTAGTTGGGATTGTGCTGCCTGAGGGAT
AGCATAGTGAATTTCTGGAGAAGGGGTCATCTCAGCGCCAAGACCATCAATCATCTTGCA
TTGTTGAGAACAGCCGCCAGTATTCTATGCTTTCTACAGGACATCTTGTTTAGATTCGGT
GCCAGGTTGTTGGGAGTTTTGCCATCTGTCTGCCACTTCCATTTCTTGAGTTTTACTTTT
GAAATAACTGAGCTAAATTTAACAAGGTTTTGCCATGTCCTTCCAGATGTACTATGTGAA
CCAGGAGCTTACTGTTGAGGATTTTCTTTACGATGATGATTACAAGATAAACCTTCCTGG
GTCCAATCCAGAAATCCTCAATAACCTTGAAGGGATTGGTCAGCAAGAATATCCGCAGTT
CAATTTGCCACAAGAGTTGCCCCCTAATGCCTATCTTGATATGAGCAACTATGGGCAGAA
TGCTGGTGATGTTTTCCTCCACATGTCAGACTTGCTCACAACAATGACTCCAGCACCTGC
TTCATTCCTGAGGCCGAAGTGCGCTCTCTGGGACTGCCCTCGGCCAGCTCAAGGATCTGA
AAGGTGGCAAGATTACTGCAGCATGTACCATGCTGAATTGGCTGTGAAGGAAGAGGGCCC
TCCAGGCACAATGCCCGTGATCCGTCCTAGAGGCATTGATCTAAAAGACGGCCCTTTGTT
TGCTGCTCTTAGTGCAAAAATCCAAGGAAAGCATGTCGGTATTCCTGTCTGTGAAGGGGC
TGCAACTACGAAGTCCCCTTGGAACGCACCTGGTAACTTCTTGCCACATAACTCATGTTC
TTACATTTGTATCGGTACCGGTAATTATGTTCTCACTGTTTGTTCATTTCTATCATCTGC
AGAACTTTTCGACCTTTACATCTTTGAAGGTGAATCCATGAGAGAATGGCTTTTCTTTGA
CAAACCAAGAAGGGCATTCGACAGCGGAAACCGGAAGCAAAGGTCCCTGCCAGATTACAA
CGGCCGTGGCTGGCATGAATCAAGGAAGCAGGTGATGAAAGACTTTGGGGGTCTGAAGAG
ATCCTACTACATGGATCCACAGCCGTCTACCAGCTATGAATGGCACCTCTATGAATATGA
GATCAACGACCGCGATGCCTTCGCCTTGTACCGGCTTGAATTCAAGTCCTCGGATGCAAA
GAAGAGCGCTAAATCGAAATTCACTTGCAGCCCACTGATTGAAATCCAGCAGCAAATGGT
CAGGCTGAGTGCGGACGGTCCCCTGGAGAACAAGCGGGCTGCCCGTGGGCGGACAAAGGA
TGCTAGCGCGAACATCTACCCGGTTCAAAACAGCACGGCTCACGACAATGCCCCGGACGC
TTACCAGGCGGCGGCGCAGGTGGACCAGATGGCATTTTTGAACGGCAGTGTTGTTTATGG
ACCTCATCTCCCATACGGTTACCCGACCGAAGGAGGTGACTTCTATTGGAACTCAAACGA
TGGGGCTTGATAAAACCATCTTCTGACTTGTGGCATATTTCCGCCTTCAAGTTCTAACCG
TATCAGCTGTAATTAAGGGGTCTATTCTATCGGCAATGGCCTCCATAATTTCTATTGGGG
ATGGCCTCCATAATTCTAATTGTAATGGTGGGTCAAATTTACAGGAAACGTCTCTGAGAC
AATGGATGAGTCTTGGTGTCTGCGCCGCAGTCCTGTACTGCGTCAGTGTCACATACTCTT
ACTCCCTTTGTATCTAACCAACTAAAATTATTTAGGTACAAAGGAAGTACTTACTCAGAC
AGTCCAGTATCCTGATAGTAAAAAAACATTTCCTTGGTGCACAGCGTAAATTACCACATT
TGATTTGACAGGTCCTGTTGTCTATTGCGTCTTTTGATAGAAACTTGGGTTCTACCAGAT
CCTGACCGAAGGTTGTAGGAAAAGGAAGGGATCGGCCGTGGTCGCCGACGCAGGGGTGCC
GTCTCGCACGGATGGGGGCGACGACGCGATGGAAAGCCGATCAAAATAGATTGATCTTTG
CTTAATCTTAAAAGTATTGATTACATTCCCTAGGCTATAATAAACTGAGCTAAGCCCCTA
ATATTATTAAGATAACTAGACCAGTTTGGCTAACTGAGCCTCTGATCATAACAGCTTTTC
TGTTCTAAATCTTGATGAAATGCTGAATTTGCGTGTGTCATACTGTATTTGTCATCCTTC
AGCTGCAGCTACAAGTTTTCAGCCTCTAGAAAAGAAAGCACGTTCTGATATTTAGCACGG
CTGTGAATCGTTTTGTTGTAGCGTCAATGGCTGTCATTGGCTAATCGGTTATTACCAACA
CGATCCTGTACAGTAGAAGTTTCAGGCAGAAAGCGCATAATATTATATACTCCCTCCGTT
TCTANATATAAGTCTTTTTAAAAATTTCACTGATAAACTACATACAAAGCAAAATGAATG
AATATATACTTTAAAATATGTCTATATACATCCGCATGTAGTCTTTTGATAAAACATCTA
AAAAAGACTGATATTTAGGAACCGAGGGAGCACATAAATTGCCGAGGCATGTTGGCACCT
ACGGCAAAAGGACCGTATAGATAGGCGCATAGGCTCCTGTCCATCGGATCTCAAAATTTT
TAAAATAAATAAACCGAAGTTTCACAAAAAGGAAAATCAAAGTGTGATCCTATAATTTGT
TATCAAGATTTTTTTTGATGCAACAAATGGAAGACGTTTTAGGTCAGTTAAGTAGATCCA
TCGTGTATCTGAACAATACTCCCAACTTATACTCCCTTCGTCTTAAAATTCTTATTTTAA
ATTTGTCTAAAAATGAATGTATCTAAATACTAAAACATGATTAAATACATTCATATCTAG
ACAAATCTAAAACAACTTTTTGAAACGAATGAAGTATAAGTTATTTTTTTAAGTCATTAC
TCCTAGAGGTTGTAGTAAGTACAACGCATATTATCGATGTTCCAAATTACTTGTCTTGGG
TTTGTCTAGATACATCTACGGATGTATCTAACATTAACATATGTCTAAATACATCCATAT
GTGAACAAATATAAGACAAGTAATTTGTGACTAAGGGAGTATATTATAGATCCACATGTT
TTAAACTGCCAAAACAGTTTATATTTTAAAAAGGCTGCGGAAGTGATCCGAGCACATTTA
GTAATATTCGCCCTTATCATTCCTATACAACAGATCAAACATTGAGCTGGCCTTGCATTA
CCAATGGCACATACACCAAGGCAGTTATATAGCTAAAACAGTTTATTCATAAGCTTTAGA
GATATTGTACAGTACATAATATTAAAGCATCGGCAGACATAATGTATATAAACACGCTCA
CTCGAGTACCACACGACAAGAGTTTCACATGGTTCATCAAGTAGGAAAGGAGCAATTAGT
AAATATAACAACATAGTATCGGAATAGATCCATTGTCACCGAACGAATTTATTCTTAAGA
CCGGACCACAAATCAACAAACTTCTCAGAACATCACCATTACACCTGATCTTCATTCCTC
ATCCGTGCGCACAGCTGCAACATGAACAACCAAGTCAGTGTTCAAGAGAACAATACAGCA
TGAAGTAAAACCAAAGCAAGAAAGAGCCTCATCTGAATGCCCACCAGGAAGAAAGACATT
AAATATGCAAGTGCACAAATCATCACAGAAGCTGGGTAAGCAAATTATTCAGAACAGCGT
AGATGTTGGATTCAACACTTCATGCAAATCACGCAAGAGAACAACCATCACAGTCACTTA
AGCATTCCAAAACCCAACTACATGTACTTCTGCAGTTCCTGACAGCGCCCCCGAGTTGCA
ATTACAATATCGATACTTATATGAAGCACAAAATCAATATCGCTACAGATCCCTACGAAC
CTAATTCCGTTTCAAAGAAAAACTACAAACCTAATTGCACCTATCCAGCTGTTTTACTCA
GTGTTCACATGCAATCATGCATGCGGCTGAATAAACTCCCTCTGCTTTGGTACCAGCTCT
GAGCATACAAATAGGGTATGACAAATCTTAAGAGGCATTTTCAGAACTATGTGGCATGAA
TGACGCTAAAAGTGATAAACTACATGTGCTAATTATTACCACACCAGCCCCATCTATTAG
TAAACACACATGCCTTTGCCTCGTGAGGTTTCTGTCATTGGCATGAGTTCGTGAATGCTA
ATGCGCACACAGCAGACACATGGTGCCACGAATTAAGCTCATGGTATTTTCCTTGCATCA
GGGGAAAAAAATCGGTCACAAAAGCTTGCAGGGATTAATCAATAACCATGACTGCGTAGA
AGTTCAGGAGGGATTCCAACAGTTAATCTTCAAATACAGTCACCACTATTGAGTTTCTCC
TGGTTTTAATGGAATAAATATATTTTTACCTGGTAACATTATGCATAAAACAGAGACGAT
AAGCACCATCATGCCCACCCAATCCAGCCTATGAAAGGTAACATTCAGGATAGTACCCTC
ACTATTTATTACCACTTCATGCGTTCATGGTTATTCGTCTCTATTTTCCAGGAGACAAGT
AACACTATGTTAGTGCTAAAACTGTTAAACATAATCTTACGATTCTAGCAGCTCCAGGCT
ATAGGAAGAATTAAAATTCCCAATACACCGTCGTCCTTAGCAGATGGCAAAATAATCTTG
TACAGTATGTATGTTACACTGACAGCTAACTTTAAGAACATCCCCTCCTCACACGCATTT
CTACCAACAGAAGAAAAAAAAAGCGACGCACACCAGATCCGTGCCATTTAACAGATCGTA
TTCAATCCAGCAGATCAACCTAGACAGGTAAACCGGTAGGGTAGACCTAGAAACAAGATC
CACATCCAACAACACAAAGCCAGATCCACGAACCCTAGATTCATTCCGTGACCAGGCAAA
TCAAACCGGGTCAAGGACGCGAGACAAGGGCTTGATCGGATCGGGGAACTTACTGGGCTT
CTGCTGCTTCTCGTCGGTCCACTTGGAGAGGGAGAAGTGGACCTTCTCGCGGGAGGAGAG
CTCGGTCTTGAAGGGCTCCTTGAGGCAGCTCCGCACCAGCGCCGCGCAGACGTTGGAGTA
GCCGATGTAGGTCATCCCCGCCGCACGCCAGAAGGGCACCGCCGCCGTCACCGCCGACAT
CGTCGTCGCCTCCGCCTCCTCTGCTTCTTTTTTCTTCTCTTCTCTAGGGTAGAATAGAAT
GCTCTTCCTTCCCTCTCTGCTCGAGACGCCGCCGCCGCAGATAGGGATGGGGAAATGGGC
TTTGAGGCCCTTTTATCTTCTCGCTGGGCCTCTTTGCTTCTGCCCAAACGGTCGGGACTC
GGGAGCGAAGCCCACCCCGCAGACGGGAAACCTCCCGGTTCGATTAGTCCCACATCGCTC
GCGGAGCACGGCGGGGCAGGG
