Map Locations of contig_6807 (9265 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_6807

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75503 1 851 bp AK357192 Not available Available None
MLOC_75504 4 2723 bp AK357192 Available Available None





CDS Structure of MLOC_75503






CDS Structure of MLOC_75504






Contig Sequence (9265 bp)

>contig_6807 9265 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGAGGTTGAGATTCTCTGCACCGGAGGCGACGCCGACATGAGGAA
AGCTTGGGATGTTTTCTTAGTATTGAACTCGATACCCACTTACTTAATACATGGTGTATT
TATGCAATACAAATTTGCACTCATATGTGTAAATGGTGTTTTTAACAGAGTACCATCATA
AATGCTTACATACACATTTATACATTCATCCATATGAACACACACGCACATCCGATTCTT
ATGAACACCTTAAGATACAGAGCCGACATTAAATCATGAGATTGACAAACTCATCATACA
CACCCCGTAGAACTTATCATGTCACTGAACGAACATTGCCAGAAAACCTGAAATAAATTC
CAGAAAAATACGAGCATCAGTCTCAAGTATATGACATAAACCCGATGGACTAGAACTTAA
CCATGTGATTTACACTCAGTTCGCATGTAAAATGTATTTCGATATGGATCTCACACCGTC
CGTTTTGTTCTATAAATCGCATAAATAAAGGTGTCGATCAAGACTATCTCAGAATGAATT
AAAATCAATTAGAAGTTTAGACCAAAGGGAGGGAGTAACTCTTCCATAAGAAATGTGAAA
AGGTCGATGGTCATATATTAAAGTTAGATCAACCCTTACAAGAACATCCTTACAGAAATG
AAAAATTACACACGTGACATTAGAAAATCTATGTCGTCTTTTTCCTGCACTCATCGGCAG
CATACCTTGAGCAAATCTCAATACCGCCTCTGGACCTACAAAATACCATCGGAACCAAGA
AAACGTCGTTGATGCAACGGCCAAGAAATCAGTTGTTCAGAAAACACTCATAACGATTTG
GGAAAAAGAACGCCATCCTAAAGAACATGGTGTTGAAGTGGGATGGGCGATCATCGAGAT
CTAGAGAACATAACCTCAAGCTCTCCGACGACGCCGAAGTTGGTCGAATTTCGCTGGTTA
GAGAAGGAGCCAGAGGACAAAGACACCTTCAAACACGACCTACATAAGACAAAGACACAA
TTGGATCCACTACTCCGGAAGATCAGTGACTAGACGACCCCTCTGAAAGCACAACTTCTT
CATAGACGATTTTGGTAATTAATAAAAACATATAGTTCATTGAACTAATAAGCTTATCAA
GTATATTTTAGGAAATTTCAATGAATGGATTGGCTAGGAATTGTGAGAAGGGTCCCCTAA
GATGCAAATAATTCTTATTGGCAAAAGCTCCAATACTCTATATTTTGTTTTGTGTGAGTT
AATCACAATTGAGTCCATAGGAAAGATAATACTATTAAAAGGGGATGAACTACCGATAAT
GATCTGGTTGATCAAGTGCTTAGAGATATGCCACCAAAAGATTCTCACAAAATCCTCTGT
CTTAAACCCTGAACTCTAAATTTGATGCCATCAAGATTTCCACTTTGGCCCCACCGAGAT
AAAACCTATGCCAAACCTCAACACCTTGGTAGGACTAAGTCTGTGTTACGTGGAATCGAA
AAGTTGTGACCAAGTTTCTGTGGTTGAGATTTTGAGTTACGGAATTTCCAAGGTTTCATT
TTCGGAACCTCAGAAGTGATGGATATGTCTAGGTTAAGCCCAATCGGTCTACCAAGATGT
TCCATTCGGTCTCACCGAAAATTAAAAAGTTAGGACATTTTGCACTAGTCGGTAGCACCG
AGTTCTAACTTTGGTGTCACCAAGTTGGGCAATAATATTGTAACGGTTGGATTTTGGAGA
AGTCTATATATAGCCCCTCCACTGCTCTCTCGCTCATGGAGGGAGCAGTCAGAGCGAACC
AACACTTTCGCCATTCATTTTCTGAGAGAGAACCNNNNNNNNNNGTGTTGAGATCAAGAT
ATTACATTCCTACCATATGATTCTTGATTTCTAGCCTTCCCAAGTTGCTGGCGGAATACC
GCCTCTCCAGCACGATAGGTGGCAGCTGGAAGGTGGAGCCGTAGTATTGCATCCTCGCCT
CGCTTCGAGAGTGCTCTGGATTTGAGTGAAGAAGAGAGAAGGGGACGACACACATGGATG
TGCGGAGAATAGGTGGAGGGATAGGTGGTTTAAATAAGGGCACTGGCCGCGCTCTGGATT
TGCTACGTTCAAACAAGCCGCGACGATCGATATGCCACTTTAAAACCAACTTTAATTGCC
ACGTTGAATCGATGCGAGTGGATCGAGAAGGCTGAACGATGCTCTAAATGAAGGAGGCAC
GTGTGCGAGAAGAGACGAACCAGCGATAGCGACCGTTGCTGCATCCGCGGCGGCTAACGT
GCAGGAAAGCGGCTCGGTCAGCACATCGTGGCGGCATGCATCGGTGCAGGCAGGCATCAC
TACTAGGGATGTCCTGCATGCATAGCAGGCTTCTGTCGTGGCGACGCGCACATGCGTTTC
ATGCAACGGCCCAACAGTCCTAGGAAACCACGCCCCCAACGGTCCAACAACACTACCGTC
CAACACGGCCCCACTAGTCAGGTCCAACGGGCGACATTGTCTAGCGTGACCCCACTTGTC
AGAGTTCACGGTCAACGGTTTGACCCCACGGCATCCTCCGTTGTGACCATTTCTAAGGAT
TTCGGTCAAGGGAATGGAGAAAAATGAGCAAAAGTTAAAAGCGTGGGGATGAATGAGTAG
AGCTAAGAAACCAGGGACAGATATAAAAATCTCTTATTGTTTTCAGCCGTCGCCATGTAT
CACACACGGGACACATTCATGAGAACGTGTGTTTTTTTGTGTTTTGTGGAGGGTTTCTTT
TTTTTCTATTTTGCTTGGTTTATCCTAGGTTTTTGAAGAAAAAAATGTTTTCTGATTTTT
TCGTGTGAAGCACACTAGGGAGTTGTGCTTCCGTGTGAAGCATATATTTGTTTCTCACAG
TTGTATTTTTTGAAAAGTGAAAAGCATAGTTGTGTTTTTAGGTACGAACATAGCTTTGCT
TTTCGAAAAGTGAAAAGCACAAGTGTGCTTTTAAACATTTTTTATTCAAGCAAATACAGT
CATGCTTCCGGCTTTTTTCATGTTATTATTTTTCTGGGCTCCCAATTTTTATAATTTTTG
GTTTATTCAAATCTATTAATATGGAATTTAGTTTTAAAAATCTCAAACAAGAAACACAAC
CATGAAAGCGGTACAAGATCTGGATGCACAGTTCGACAGATAAAATATTAAAAAAATAAA
CAAAAAACACAAAAACACAAAAAACACACAGGCTGTGACAAATGTGACAAAAGGTGGCAG
TGAAGTTTGCAAGGGATCGGATAAATTGTTCACCCTCTGCCTAAACAAACAAGGTGGCAG
TTGCCTGCACACATAACTTAAACACAAGTTTATGTATATCATCAAAGTCATCAAGTTTGA
CCAAAGGTACGACCATAACATCATGTTTTCCCTTTCTCAAATGAGAGCATACAAATCAAA
ACGAATCATCTTGCCCACATGTCATATCAAGAGACAAGGGTTTCTTATCTAGATACGTGA
GACTTTCTAGGGTCAGCAGACCTTTGGGCGTAAATTAATTACATGAGCCAACCGGCTCCA
CAATAACACCGCTGCAAAATAATCGAACGACAGGTGCTCCAAAAACCTGTGCAAAACAAG
CTTTGCACAATAGCTGACGCCAAGGCCCGCGATCAGCTCCCTATATGTTGAAGAGATATC
CGAGATCTTCCACGGTGAGCCGAGTTGAGATGCCACCTGATTTCTCGCCGAAAGCTGATT
CTACCATCTCTCTTTTTTTCGCCTGGCAACAGAAACATACACAATTTGTCACGACAAAAA
CACAGGGAGAAGTATAAAGGGTGGGACATACAAACAAGTAGACTAGTAGAGCGCCAACAT
GTCTGGACAAAGTATTACCTGCAGAGCTAAGATTCGATCTTCCACCGTGCCATTGACTGT
GAAACGAGTGACAGTCACAGGACGTGTCTGGCCGATTCTGTGGGCTCTATCAACTGCCTG
GTCCTCAGCGTAAGGGTTCCACCAGGGATCGAGCATGATCACATGGCTAGCAGCTATCAT
GTTTAGGCCAAGATTACCAGCCTTCAGTGACATGAGCATCACTCTAACCTGAATGAGGAA
CGGAAAGAGTTTTTTTCTGAATATTTGTTGTTTGAATGGTGGAGATGAATATTATTAGTT
TCTAATGCAATAAGCTGAAAAAGAAAAAGAGTGGAACGTACCTCTGGGTCAGCCTTAAAC
TCTTGCACTGCTTCTTCTCTATCGTCAAGGGACATTGACCCATCAAGCCTTCTGAAGTTT
ATGAAATTGCTATTCAGTGAAAGCTCCAGGACGTTCAGCATACCAGTCCACTGGGAGAAG
ACTATTGCCTTAGGAGTATCACTATCAGCAGGGCCATGTGTGTTGAAGATTGATTTCAGC
GTGTCAACGGCACCCTTGATCTTTGAGGAGATGTAACTGGCTTCACAAATCGAGGATGAT
TCATCTGCTGCTGCTGCTGCTGCAGAACTATCTGCTGCTGATGCTGCTGCTGCTGCTGCA
GAACTATCTGCTGCTGATGCTGCTGCTACCACTGCAGAACTATCTGCAGCTGCTGCTACC
ACTACAGAACTATCTGCGGCTGCTGCTGCTGCTGCAGAACTATCTCCTGCTGCTGTTGCA
TATGACTCCAACTCATCAGAGATACAGAGCCTTAGTACTGGGCGTGAAAAAAGCAATTCA
GAACATAATTTCTGTTTGCAAACAGGGCAGACTTCCTCTTCACTTAAGCTCTCTTGTGCA
CATTCATAGCAGAAAATATGGCAGCATGTTGTTATAACAGCATTCTCCGGTGGTTCCTGC
AAAACAAGGGGACAAGCTAAATTATTCTATACACATTAAAATAGTTGTGAAAGAACAAAT
ACTTCAGCTAAATAAAAACAACAACCTTTGGTCCTGTGCGAGATTCCATCCCATTATTTC
TATGCTCCTGCAGAAAAATGAATATTCCAGAGGCAAGGTAACAATTTTTACACATACAGA
TGTTGACATACAGATGTTGAATAAACTTTAAACATACATATGTTGAGTGACCAGGCTGCT
TACCGCACATATCATACAAATTGGTCGCCGTACTTCCAGCTTTTCGAGCAAATTCATCAC
TATTTCCCTAGGAAGTTGTTTTGCCATTTCTATGGAAGCTGGGTCAGTATAATTTGTTTT
ATTGCTCATATCCTTCAGAAGATAAGGGTGATCACAAGCTTGCCGAAGCCGCAGCAGCAA
TACAAGAATGTTTGCATAGTTTTGTTTTATTGTTCCAGCAGCAGCAAATTCCTGCGGTAT
AAACAGGAAACATATGAGCAACACAAACAAAAGGATATTTTGTGGGAAAAAAAATAAAGG
TATAAATTATTAAGAGCATCAATGTTAAACTGACTGCTAAACATAATAGCTATAATGTTA
AATGCAAATATTCTGATTATGTTCATGAAAAAAATAGCTAAGGTACCGAACAATCCCTCT
GAGCCCAATACAGTTTAAAAAGCTCACCGGATAGAAAGGTTCTGGGTCGGTATGAGACAA
CCGGGATAACAAATAGTTTGGGAAGTATCAATAGACAATATATAATCATACTATTCTAAG
AGATATTCTTATAAGCCACAACTGAGTTGTGATAACTCAAACTGAGCTGTTTTTCTTTTA
CTTCAAAAAGTGCACAGGAGATACTGCTTTTGAGATTAGACAACATTAATGCACCCTAAT
TGCCAAAAGTTTAGATATGATCTAAACACAATATCCAACTGAGTGACCAAGGATGTAAAA
ACTTAATAAAATTAAGTTCGTAAACGAACCTACCTTGAACTTTTCCCGAGAACCTTCTTC
AAGAGCCAAATAGAAATACCGCTCCTCTTGTGTGAAATTTATTTTCTTCAGCTCTATTGT
CTTTGGAGGTACTTTTATAATTGGTTCTCCATCAAGTAGTGTTTCTAATGGAAACAGTTC
AGAAGTGAATCAATGCCAGAATATCTCAGCCAACGAAGAACCAAGTTACAGTTAAGAGTA
CTTTAAGAGCAGCTTACAAGGTTAAAGACAAAAAAGATGATGGAGCTGGTGTCCAAGGAA
ACGGATTACTATACGCAAACAGCAAATAAATAAAATCGAAAGGTGATTACTGCCTAGATA
ATTGGTTCCCTATAATTCTGTACTTTGTTCCTGCTCATTCAGTTTCTAGTTTTCATATGT
ATTTAATGGCTGGCAGAACAGGAGACATTTATGCTAATAAATGTACATACAAGAAAATGC
ATTTTCCAAGACAATAAAGATAAATTCATGTCGCCATATAGAATGTCAGTCAAATAAATA
TATGGTTATTATGCTAAATTCGGTTCTGTAGGCCAAGGTGAGTGGATCTTACACCTTTAC
AGCATATAGATAGCAAAAACGTACACAATTGCAGACAGATATATGTAGACAAACTGTCAA
AGTATTTTATTTCACCTTTTGTACGCCGCAGCAGAATTATCTTCAGGACAGTTTGAAGTT
TCTTATATCCCTGACTTGAGCCTCTAGATATTGGGCCCTTTATCATTGAGCGGAACAAAC
TAAATGAAGAATACGGCTCATATTTCAAAAAGCGGAAATAACTGTACAGATCGTCAATTG
TATTTTGCATAGGTGTACCCGATAAGCACCATCTCCTTTTTGCTTTTAGTCCACAACAGG
CTCTAGCAGATTTAGTGTGGTGATTTTTTATTGTTTGAGCTTCATCAAGCACAACTCTAA
ACCATCTCACTCTGGCAAGTGGGCCACCACCCAGGTCAGCGTCGGAACTGCTAAGCTTCT
TTTTCTTTATTGCCTTTTTCTTGGTCTGTTTAGACAGTTTTCTTTTCTTACGAGCAGCAA
AATCTGGACATATCCCATACTTTTCATCGATATTTGGCTCCATGTCATCATCAGAGTCTT
GTTTGGGCACTTCTTGGCCTACAATGGTATATGTGGTCACAACAACATCATATTTTGCCA
ACTCAGTTGGTTTTGTAGTCCTTGAACTTCCATGATAAACCAAAACAGATAATCTAGAAC
TTTCAGTAACCTTGGCTTTGATCTCACTAGCCCACTGCTTAAGAATGCTAGCCGGACAAA
CCACCAGTGTTCCTGCAGATGGTCTAGTAGCAGACCTCGAGATTGATGCAGAACCCACTC
TGGCCTTCTTCCTGGGCTCAACTTTAACATTCTTGGCCATATTATTAAAAGCACTCCCCG
ACAAACTAGAACAGAGCTCATGATCAAGACTGTCTGAGGGTTCCTTCTTGTCCATTGCCA
TCACTATATCATCATCATCAAGGTCTAATGGCACAGAATTTTTACTGTCGGAATCAGCAG
ACATGAAGTTAGACTGCTGAACCCTCTCCTTTTGTATTAGGGAAATTGTTGATATTGTCT
TCCCAAGACCCTACAACATGGAAAATTATCGGGCGCTAAGAAAAGGAGAAGTGGTAAAAT
AATTAACAGAAAGTGCAACAAGCTAGGAAATGAAAATAACCTGATCATCTGCCAAAATTC
CACCTGGACAATGCGAACTATTCTCCTTGGAGAGCATCCAAGCTAGTGCTATTCTCTGCC
AAACATAAAAGAACATAGCAGTGAACAGGATAGCCAGAGCAAACATACCAATTACAACAG
CTGAGATTTTAGAAGTTGAAGTTTACCTGATGCTTAAGGAGTGATATGGACAAAACACCT
TCAGGCAGATCTTCTTCCTTTGTTTCCTGACTGATATGCTGCATAAAAGTTTTGTTTACA
ATCCATAGTAATTAGAATCCGATCAAAGCCACCAGGCAATTAAAACACATATGATCTCCA
CAGTGACTTGTAACATTATATACCTGTAGCGCTTCTTCATATATAGCTCTCTCATCACAA
CCAAGAGGCCTTTTTTCCCCGTTTGGATGGCTTTGCGTGCTAAAGCCATTGGAAAATTCA
GGGCCATTAACTGGATTAAAGGACGGCATTGATGGAGGAAACATCCTATGTGAATGTGGG
CCTTCATACGCATAGACATCATCTGACAGTTACAAAAGGCAAAAAGGCATCTTAGTTACG
GTTTGCACCAGCATGATTACTTTTGTACAATTACACCTATTATAGTATTACAAAGGAATA
AGGTACATACTACGCACCATTATCGCTATCAGTTTTGACCTGGCTGCTACCAAAAGGTGG
TTTCCAATCTACTGATGTTGCAGATGAAAACATCCCAGTTCCATCATCAGCACTTGTTCC
AACATAATTAAACCTTGCAGTAAGATCCTCCTCGTCACTCAAACTTGGATGACTGATTGG
AAATGATTGAGGCGGAACAGAATACATATAGATATCATCATCTGAGAAATTTGAACAGTG
AAGAAACATTAATCTTGCTTACTAGTCACAGGCTGCTGCAGCGGTGCCCTTTTAAAAATT
GTTAATTGTCAGAATTAATCAAGGATAGATGCAGTGTACTCACCATCATCAATTTCCTGC
TTGGTTTTACCGTATGAGGAATCATATAGCATCAGCGAAGAACTTGAGAGAGGATAGATC
CTGTGTGACGAACCAGCCGGAGATCTATAAGAGCATGAAGCGTGATTGCTACTTATCCAA
TCATCATCATCCAAAGTGATTGGCTGTTGTGCATTATTCTTGGCAAACGGCGTGTTGAGT
AAAAGAAGAGAGGAGTCAACTCCATCTATAGGGACAACATTGTCTTTTCTGTCCTCTGAG
CACAGGTGAGTGATGCCTTTGCCTTTTGAACACAATTTAACATCGTCCTCACTATCTGAA
CACAAGTCAATAATCTCCATGTTGGTGACTATGCAAACTTGTCAGCTATCCTGAGCAACG
GCCGGGGCGGTCTTGTCGATCGAAGTGTCTAAATCCTGAAAGAAGCCAAGCACACGTTAG
CTGGCAATAACAACGCCTGTACTAAATAACAAACAAATGTGGGCAAGATAAAAATGTGCA
AGAAGCAGGTGGATAAACCTCTCCGACAGCAATGCGTTCAAAAGCCACAGCAGTGGCTGG
AATTGCGGTCTCAGATTCAACAAAGAGCTACACTGAAACCTGAACGGTTTTGTATTTTTC
AAACCAAAGGCATAACAGGAACAGGACGGTGTCGTAAGACAAGCACATGTGGCAAACTAC
GTCGCGGGCGACTAATTTATATTTGAAAGAGACGACGGGGCAATGAGGACAACCGAGTCG
CGCACGAATCTACGGGACGCGCAATCCTAGTCGGTCTCGCCCACGATCGGCAAGAGCTGC
CCCAAGCCGCCGACGCGGCCGGTTC