morexGenes - Barley RNA-seq Database

Contig contig_67958
Source Contig contig_67958
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_67958 (8469 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_67958

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75464	5	2445 bp	MLOC_75464.1	Available	Available	LOC_Os03g14210.1, FRAME:+3, EVALUE:1e-154, 13103.m01662 protein glycosyl hydrolases family 17, putative, expressed
MLOC_75465	1	379 bp	MLOC_75465.1	Available	Available	None
CDS Structure of MLOC_75464

CDS Structure of MLOC_75465

Contig Sequence (8469 bp)

>contig_67958 8469 assembly3_WGSMorex_rbca.fasta
GAGATGGTGCTGGTGTTGATGTTGATGAATAATGGTTCTCCCACGAAGGAGGAATCGTTG
GTGATGACGACGACTTTGATTTCCCCCTCCCGGAGGGAAATTTTCCCGGTAGAATCACAC
AACCAGAGAGAAAAAGGGTCTTTGCCCAGGTTTCCGCCTCGAGACGGCGGCGCTTCGTCC
CGAAACTAATCTCTTGATTTTTTTTCTAGGGTAAAACACATCATATAGGAAAAGATGGAC
GTCGGAGGGCCAGCAGGGGCCCACAAGCCATCACAGCTCGACCAGGGGCTCGGTCGCGTC
CTGTTGGCTTATGCCGAGCTGGCAGCCCTCGTGTGGTGTATTTTTGTTCCAGAATTTTTT
AAATATTCCAAAAATATTCTCCGTGAAATTTCAGGTCATTTGGAGTGTTGTGATTTCTTT
GCCTATTCTTCTATTTTCCGGTCCAGGATCCTAGTTTCCAGATATTTCCCTCATTATGAT
GTTCCTTGCATATTCAGAGAGAAAACGACATAAGAATTGCATATCGATTTGGAATAATGA
ATAAGAACAAAGTAAAAAGGTACAAGAAATCATGATGCAAAATAGACGTATCAACACACG
CGCGCACACACACGCACACAACACACGTGACACGCGCGCACACACACACAACACACGCAC
ATGTAACAACACACACATCAGCAACAACACACGCAACAACACATGCAGCAGCACCCACGC
GCGCGCACACAAACATGTAGCAACACACATGAAGCAGCATCCACACACATCATTAGCACA
CGTGTGCACACGCACACACACGCAACAACACACGTACAAGCATACCACATCAAAGATAAG
ATGATCTTTTCAGGTGTCACTTAGGCTTAAAATTGACAAAAATGTTATAAAGAACATAAA
ATTTAAAATCGTCGTTATATACGGAAGAAATCATTTATCGATGTTAAATATTACATAAAA
TTTAAACATGGTGTAATATAAGGAATTCTTTTAATTTTTTTAGCTATAAATATTGTGATA
CAGAGGAAGTAGTACATGTTACAGCCTTCTCGGCTAATTACACCATCCGATGCATAGAGC
AGCTCATAAAACTCCAACGTCTTTGTGCTCAAGCATGGACGACTCCTCACAGATCGTTCC
ATCTTCACGTGTGTAACGGTGTGATGTGCTTCGACCAATAGCATCATTCTGGCGTTGAGC
AAGCATATCTTCAACTGTCACGCACTAGCCTACGGGCCCAAGAAAATGGACGACTAAGAG
CATGTATAATATTAACATATGGATACTACTCTCTAAGATGTGATGGATTGTTGTTTTATA
TAAAAAGCGGAATGAAAACTTTTTTCAATAATAACATATGAATAAAAATATTTCATATTA
GAAAGTAGCTTGAGATATTTATATTGATTTTTTCTCTTCAATGTAAATTATATTAGTGAG
CCTCATTAAGAAAATTTTTTTTGATGCACATGCGTCTTTATTCTTCACTTAAACTTTTAA
GCTTTTTACATCAAATCATTTTTTTTCTCCTCAAACACCTTCCTCTTGCTGAGGATCCCG
CTATATCATTTGAACATACATCTAATTCTATATGATATGCGAGACATCACCCTCAAGCTA
TGCATTGGCCATGCTCTAAAATATTCCATGCCCTTTTAAGTAAAAAGAAATAAATTATGC
GATGTATCTCTTTTTTAAGAAGCCTCGTAAGTGTGACATGTGTGTCACAAAGTAAGGCTG
TCATGATGTTTTATTATATCAAGTTTAGTTGTTTGAGGATGATAATTTTAGTTTTGAAAC
GTGACAACTTTTGGTTTGAATGACAACTTTCAATTTTTCTATACTTTTTAAAGATAATTT
TAATTATAAAAACATCACAATGATGTTACTTCGTGGCACATATGTGGTACTTATCATTTA
GTTTTTCGTTTGAAAAGCGTAGGTTTCACTTTTTTTAACACAGTATATATGTAAACGTTC
ATATACACGTCTATGCACTTACCTTTATGAACATCTTCAAAAATCTAAATCAATATATAA
TTTTAAAATTTATGAGATCATCATAAACGTCTCGTCGTTGACTGAAACGTCCCTTGCTTC
ATTGTCCTTTCTCGTATTGAATACGCATAGACGAAAATACTACTGTAGAATGAATAAAAA
ATAATGGGCTAGCACTAAATGAAAAAACTTTTGCAACGTCTTCTTGCGATGCGCGTCTGC
CCCATCCCGGCCTCCGTCACGTCACGTGTGACCCAACGTTTCCCATGCGTTGATGGCCCC
AGAAATACAGCCGTTGCGGCGGCACGGTCTACGGGCACAGTCTCTCGTGCCGACCATCGG
ATTCCAGCCCACCTCCCGCTCCCAGTAGATTAGTAAACCAATGCGTGCCGGTAAACACCC
CCGTTGTCTGCCTGTCTTCGGGGCCCCCGTTCAGAATCACCTACTACTACGTTTCATGTC
GGTAAAAAAAGATGCTCGATAGGAGTACTCGAGACCTCTGTACTGCCCGTTTCAATTCTG
TCGGTAACTTCACCCGATCGCCTTCTACCCCCCAAATCTCACTCTTCCTTTCCCCATACC
CAACTCCAATCACTCTCCCCCGGCCCAAAACCTTCGCCCGTGCAAATCTCACCTCGCCCT
CCCTCCCTCCGCCCCGCTCCGCTCCTACCTCCAATAATGCCGCTCCGCGACGGCCTCCGG
CGGCGGCTCCAGCGCGCAGGCTGCATCCATCTCGCCGCGGCGCTGTGCGTGCTCGCGCTC
GCGGTCGCGTCGGACGCCGCGCCGGCGCCGGTGTCGCTGCTGGGCATCAACTACGGCCGC
GTGGGGAACAACCTGCCGCCGCCGCAGGCCGCGCTTCCCCTGCTCCAGGGCCTCGGCATT
GCGCGCGTGCGGCTCTACGACCCCGAGCCTGGCGTGCTGCGCGCCTTCGCCAGGACCGGG
ATCGAGCTCTACGTCGGCGTGCCCGACCAGTGCCTCGCCGCGGTCGCCGAGCCGGCCGGC
GCCGCGTCCTGGCTCAAGGACAGCATCCTGCCCTACCTGCCCGACACCAAGATCGTCGCG
CTCACCGTCGGCAACGAGGTGCTCACGGGCAACAACACCGCGCTCACCCGCAACCTGCTC
CCGGCCATGGAGTCGCTCCACGCCGCGCTCGCCGCGGCCAACCTCGACAAGCAGATCGCC
GTCACGACCGCGCACAACCTCGGCATCCTCGGGACGTCCTACCCGCCCTCGGCGGGGGCC
TTCCGGAAGGACCTGCTCCCGTACCTCTGCTCCATCCTCGACTTCCACGCCAAGACAGGC
TCGCCGTTCCTGGTGAACGCGTACCCCTACTTCGCCTACTCCGACGATCCCAAGGGCATA
CACCTGGAGTACGCTCTCCTCGAGCCGAGCTACCCCGGCGTCCCGGACGCCAACACCGGG
CTCCACTACCCCAACCTGCTCGTGGCGCAGGTCGACGCCGCGTACCACGCCATCTCGGCG
GCGAACAGCGCGGCGGCGCGGGTGGTGGAGATACGGATCTCCGAGACGGGGTGGCCTTCC
GCGGGGGACGCGAACGAGAAGGCCGCCACGCCGGAGAGCGCGGCTCGGTACAACAGCAAC
GTGATGCGGCTGGTGGCGGAGTGGAAGGGCACGCCGCTCAAGCCCAACGTGCCGCTGCGC
GTCTACGTGTTCGCGCTCTTCAACGAGAACACCAAGCCCGGGCCGGCGTCCGAGCGCAAC
TACGGCCTGTTCAAGCCCGACAGCACGCCGGTGTACCCGCTGACGTACAAGCCTGCGGGC
GGCGGAATCGGCGGGGGCAACAGCACCGGCGGAGACAACGACTACTACGACATCTCGGCT
GCGTCGCGGGAGCCCACGGTGAGCTCTGCTTTTCTTTTCTGCTCTGTCAGTTGTTCATGC
CTACATTGACCTTTAGGGGTTCCTTTGTGGAAAGGAGATGACACTTTGGGTGATTGCATC
ATTTCTCGCTGCTTTTGCGCACTCGAGACTCGAGAGTGCGCATGCCGTAGGTTGACCACG
GTCTCCGCGCAATTCAGATTGTGAAATTAGAAAAGTTTCTTGCGTAATCGACATCAACAT
CAGTTGTTTATTCCACACAGATCCAGATTCTGGCAATCGTCACCTTGAAAATTAGATGTG
AGTGTGACCCCTCCGTCACCATCGACCAGATTCTCCTTTCCTCCCTAGCATTCCACACGT
CTGAGTAGGAACTCGACCGGATTTCTCAGGTTTCACAAAACTGCTTGCTTTTCTTTGTGG
AAATAAAAAAGGCTTCCAAAATAAATACTCCTACAAAACAGTAGTACGTATATCTGATGG
TTCCAGCAAGAGAAAGTAGATCTGAAGATCCCACCGCAGTTCTCACTTCCCGCTACATGA
TAATCAAAATGCCAAATGCGCGTCTGTAATGCAGTCTCCGGCAGGTGTTCTTTCCGGGGG
CCGATCTATATTTGTTCCTTTCTCAAGAAAATCAATGTTCCTTACGGCTTTCCTTATTAT
TCTATTGCTTTCCTCATGTGGCGTTTCTCGTTTGTTTGTGGCTTGTGATTTGAAAGGGTC
GGCGGTGGACATGGGCGCAAGCTGCTGTGTCAGGAGGTGTTGCTGCCCTCATTCATGGTT
GCAGCCTGAGGTACTGAGATCATCATGGAGCGTGCCACTCTCTCTCGTCTTGATGGCTGA
GATTCAGGGGTAGGTAGATAGGACGGAATGGAACTGCCTGCTCTGGAGCAATGGTGTTGA
TGATGATCGTGATCCGCTGCGCGGCGCTCCTTTGCTGTTGTGGTTGCTCAAGACCGAGAC
CGAGACGTGGATGTCTGATGAAACGATTAATTTGATGATGGCATCCCAGCTATGTACTAC
ACACTCTCTAGTTCCGATTCATCTTGGTGCCTTAAAAACCGCTGATCGTTGGGACTAAAA
TAGACCCAGATCAGTCGGTTTTAATTGCCTTTTAATAGAAATGTTCTCTTGAGTAGTACC
CTAGCACTGCTGTCTACAAATATACTGGATTTCATGAGGTGCCAAAGCTGAAGACTAGTA
GCCCTTCCAAATAAAATGAAAATAAATGAAGCTACTCAATTTCATCTGAATTTGTCAACG
ATGATGTTGCGATTGCTCAAGTCCAGAAGGTTAAACTTTTGTAACCTGTTGGAACTGGAT
CGGAAAATGGATTCGGTGAAGGGTACCACACGTGAGAACCTATCCTTCTTCGTTTTGTAT
ATGTTGCAGTCACGTACTCAGATTTTCAAACTTCTGGGACAACAGGACGTGGCTAAATTT
CGTGTTTTGACCCTTCTACAAAAGTTGATCGAGATCTAATCCTGATTTGTAAAAAATTCA
GGATCTGATTTTTTTTACCGAACTCCGTTTATGTTGTCTCAACGTAGCCGCTCTCAAGTC
CAGATAAATGACGACGGCTGTGATAGGTTTGACGAGCCAACGTCAAAACTCAGCCACTTT
TGTAAAGATGAAACCCAAAAGATTTTCTTTGAAAGCGTTACCCTCTCGTGATCCGGAACC
CGGGTGTGGTGTCAAATGGGCAAGAGCCGGGCCGCCACCCTCGATGGTGCACCGTATCGT
GATCTGGATACGGTGGCAAGTGAGCAAGGATCATGTCGTTGCATCCTTAGTGACGCGCCG
CATCGACGTCCGGGTGTAGTGGAAAATAAGCAAGGGTCTTGGCATTTGACTCGACGAGTG
TGAAAGGTAAGGAAGCTAGCCTAGCCTAGTAGGATCGCTTAGGTAGCTGGACCATAGGGT
CTCTCACAAGTAAGCTTCGTGAGGTAGCTGATACAACGGTGAGGAGAGGTGTTTGATATT
TTTTGCATTCAAGAGACCAAATGAAGGGGACAGAAGGCGAGGAAGGTGGAGGGTATAGGC
TTCAAGCTATGGTACCCGAGGACGACTGCAAAGAGAAATGGAGTAGGCATCTATAAGAGC
CTCAAGTATTGGAGTGGTAGACGTAGACGTGTGGACCAGATTATACTCGTCAAGCTCGTA
GTTCGAGATTTAGTTCTCAACATTATGAGCGTGTATGACCCGCAAGTAGGACATAATGAG
AACACCAAGATGGATTTTTGGGAAGGCCTCAAGGACATAGTTAGGAATGTACCCACTAGC
GAGAGGCTCTTCATAGGAGATCTCAGTGGCCACGTAGGCACATCTAACATAGGTTTTGAA
GGGTTGCATGGAGGCTTAGGCCATGGCATCAGTAATCAAGAAGTAGAAGATGTCTTAAGC
TTTGCGCTAGCCTACGACATGGTCGTAGCTAACACACTCTTTAAGAAGAGAGAATTACAT
CTAGTGATTTTTAGTAGTGCTCAACACTTTAGCCAGATTGATTTCATCCTCTCGAGAAGA
GAAGACACGCGTGCGTGCCTAGATTGTAAGGTGATACCTAGAGAGAGTGTCGTCCCTCGG
CATAACCTTGTGGTTGCTGATTTTCGCTTTCGGATTCGTGTCCAGTGGAACAAGCGTGCC
AAAGTCGCTAGAACAAAGTGGTGAAAGCTCAAGAGGGAGGTAGCTCACGTGTTCAAGGAG
AGAGTCATTAATGAGGGTCCTTGGGAGGAAGGAGGGGATGCAAACAACATGTGGGTGAAT
ATGTCAACTTGCATTCGTAAGGTGGTCTCAAAGGAGTTTGGAGTGTCCATGAGAAGTAGA
AGCAAAATTAAAGATACTTGGTGGCGGAACGATGGTGTCCAAAAGGCAATTAAGTAGAAG
ATAGATTATTTCAGATGCCTATACCTGGATTGGAGTGCGGACAACATAAAGAAGTATAAG
ATGGCAAAGAAGGCCGCAAAGCGAGCTGGAAGTGAAGCAAGGGGTCGAACGTATGAGGAC
CTCTACCAGCAGCTAGACACGAAGGAAGGAGAAATGGATATTTATAAGATGACCAAGATC
CAAGAGAGGAAGACGAAAGATGCTGACCATATCTAATGCATCAAGGACGGATCAGATCAT
CTCCTGGTGACGAACGAGGAGATTGAGAATAGATGGCATGGGTACTTTGACAAGTTGTTT
AATGGGGAGAGTGAGACTTCTACAATTGAACTGGACGACTCCTTTGATGACACTGACATG
CATTTTATGCGGTGAATCCTGGAGTCGGAGGTCAAGGAGGCTTTAAAAAGGATGAAAGGA
GGCAAGGCAATGTACCTTGATTGTATCCCGATTGAGGTGTGGAGAGGCCGTGGGGATATA
ACGATAGTATGGCTAACCAAGATTTTCAACCTCATTTTTCGGGCAAACAAGATGGTAGAA
GAATTGAGACGAAGTATATTAGTGACAATCTTCAAGAACAAGCGAATTTTTAGACTTGTA
CTAATTATCATGGAATTAAGCTGATGAGCCGTACAATGAAGCTATGGGAGAGAGTCATTG
AGCACCGCTTAAGAAGAATGACAAGCGTGACCAAAAATCAGTTTGGTTTCATGCGTGGGA
GGTCGACCATGAAAACCATTTTCTTGATACGACAGCTTATGAAGAGACGCATGGAGAAAA
AGATTGGAGAAGGCCTATGATAAGATACCGCGCTATGTCATGTGGTGTACCTTCGGGAAA
TACAAAGTCTCATCAAAGTACATTACCCTCATCAAGGACATTTACGATAATATCGTGACA
AGTGTTCGAACAAGTGATGGCAACACTGACAACTTCCCGATTAAAATAGGACTGGATCAA
AGGTTAGCTTTGAGCCCGTATCTTCTTGCCTTGGTGATGGATGAGGTTACAAGGGATATA
CAAGGAGATATCCCATGTTGTATGCTCTTTGCGATGATGTGGTCAAGGTTGTCAGAATCG
CGATTCTGAATTGGATCGGAGCTCCGTTGGTAGGATTGTGAATCATAGAATCATAACTAC
CAAGATCGTAGAAACTTAGATTCTATGAGCAAAATCGTAGAATTGGAGGGGTTAGTTTGG
ATCGTAAAGTCGTAAGATTCTAAGACTTGTGTCGCGATTCTGATAACTTTGGATGTGGTG
CTAGTCGATGATAGTCGGACGAGGATCAACAGGAAGTTAGAGCTATGGAGACAGGCCTTG
GAATTGAAAGGAAGTTAGCCTTGATGGGCACGTGGTGCCTCACAAGGACACCTTTTGATA
TTTGGGATCAATGCTGCAGAAAGATGAAAATATTGATGAAGATGTGAACCATCTAATTAA
AGCTAGATGGATGAAGTGGCGCCAAGCTTCTGGCATTCTCTCTCACAAGAGAGTGCCACA
GAAGGTAAAAGACAAGTTCTATAGAACGACGGTTTGACTCGTAATGCTGTATGACGTTGA
GTGTTGGTTGACTAATAGTCGACTTGTGCAGCAGTTGGGTGTGGTGGAGATGCACATGTT
GAGATAGATGTGTGGCCACACTGTTAGGTAACGTAGCAAAAATTCAAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCAACGAGAGAGGGGTGAGAGCTTCTTCATA
CCTTTGAAG