Map Locations of contig_67877 (4777 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_67877

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75419 1 206 bp MLOC_75419.1 Available Available None





CDS Structure of MLOC_75419






Contig Sequence (4777 bp)

>contig_67877 4777 assembly3_WGSMorex_rbca.fasta
CAAGAGTAACAAGATCTGCAAGGGATTAGCGAGGGGAATCAAATATCTCTTAGTGGAAGT
GTAGATCAGGGACTTCTCAACCAATCCCTAGAAAATNNNNAAGTTTGATTGGCCAGGGAG
AGAGATCGGGCGGAAATGAGGTTTGAAGCAAGAATGGAGCTTGGGGAGGTAAGAGGTAAC
CTTCTTGGGGAAGAAGACCCCTTTATATAGTGGGAGAAAGAATCCAATTATTACCCCTCA
CTCACAACCCGAGCAGAGCGGTACTACCGCTGCTAGGAGCGGTACTACTTCATGGTAGGT
TCACGGTAGTAAAAAATTACTACTGTGCCTACCACCGTTGAGGTTCCGGATGCGCAAAAA
GTCCGAGGGAGCGGTAGTAAAAAGCTACTACCGCCCAGAGAGTTGTACTATCGCTGGCAC
CAACGGTACTGCCGGTGGTCCTTTTGCACAGACAGGGAAGAACAAGGTGGAGCTCCATTG
AAGCATTGAAGCAAGGTGAAGCAAGGGAAAGCAAGGGAAAGATGGTGCAATAGAATTGTG
TACGTGTTGATTCCACCCAAACCTTTCCAACGCGGACCCCCTCTTAATAGTACGACTTTC
CTACAACTCAAATCCACCAAAGACAAACATAGAAAGCAACTGTCTTTGAAAGACTCCGAG
CAGCACCAAATCGTCTTGTGCCTAGTCAAGAATTATCTGAAATGCTCAATGCATACGATT
AGTCCGCACATGCATTGTCGTAAATCACCAAAACCACTTAGGGAGAAATATGCCCTAACA
CTAGGGGGTACCGAGTCTGGCATAGAATCCGGGGCATAAAATCATTGCACTTCACTTGCT
TTGGCAGCTTGCAAATTTTCAAACTCTAAATCGATAGTTTTAGCATCGCTATCGACCTCA
TCAAACTTGATGGCCTTGCCATTCACCACTTCACCCTTATCGTCATCCTCACCATACTTG
TGTTTCACTTGATCGATGCCTCCAGTTGTGGTGCTAAAAATTACTCAGCGGATGTCATAC
ATGTACACATATGGACAAGAACTAAATTTAGTACGAAAGATATAAATTCAACTAACCCAA
ATTGTGTCATGTTGTTTGACATGACGGGTATTCCATAGCTACGACAAAGGTCATCGAGCC
GAGCATTGCTTGACATGCCATGTTTAAAGTTATGTCCGATGATACGTCGGGTACCGGTGT
CGTGCACTTCACGACCTTGTTGACGGCGATGATTCCTGCCTTGGAAGAACTTGCAGACCG
GATGTCGAGCACCATTTGTGCATAAAAGTCCGGCACGTCGGACACGGACGACGTCGGCCG
CGGCCGTGTCATGCAAAATCTAGCCGGCGAGCTTGACGTCGCTGTACAACGCAAGCGAGG
AGTCCTCGACGATACGTTCGTCGCGATCTTCTACCTCATCTGTCTCTTGCACCTCACTAC
ATAATTCCATAGCCGGATCATCCTATTGGCTGAAAACATACACCAACGAGTTGAACCTTT
CTTCCTCAAGCGTGAAAGCATCCATGGTGGCAGAGAAAGGGAGTCACTTGATCTGCAGGA
TACGTACTGTACTATCGGCAAGAGGAAATACTAAAAAAGGAAACACATGGGATGGCAGGA
TCCATTTCCTAACTAACGATAGGAGCAATTTTCACGTACGAATGCATTATTTGGTTAGCT
TGATTCTAGCGTGAGGAGGTTACCTTCCATGTACGTGATGGTGGAGGGCTAGAAGAGGGA
TTATGTGAGATTAGAACAAATACACCTTACAATCTGAAAATTTTGTAAAAAATGCACCTT
AGATAAAGGAAGGGAGGAAATATATGATACTACCTAAGTTACTTCCACTGTGGTCAGCCT
TAGGTATATGTGCCATAAACAACCCGACCCGATCGGTCCGACCCGAAAAAGCCTCACCCG
GTCCAGCCTGACCTTGCCCATGGGCCGGGCTCAAGTCTGAATTCTGAGCCCGAAGAGTAT
TTTGGACCGAGCCTGGACTTGCTGTTTTTGCGTTTTAGAGAAGGGGCTCGACTCAAGGCC
CGAAGCCCGACAAAAATTAGCAGTAATGGACCGGACCTGGGCCTGAAATCTAGGCCCGAC
GACCGGGCCGGGTCGGGCTCGGGCCTAGGTTTTCTGTGTCGAGCTTGCTTTGGCCCGGTC
CGAAGCCCGGCACGACCCAAGAGATGGCGAGATATATCCTTAGGGGTAGAGATTTGTTTG
GGGGCCTTTCACCCCCACACACCGATTTTGCATTTAAGAAGCCGACACATGGAACCCAGT
CCAAAAGAAACTCGACGTGTCATTCCTCTTTATGTTCTGGTGGGCCACACCTCCACTAGC
AGCCAAACAACGCGTGCCACGTATTATAGGTATTGCTATACGCATCTGGAAGTAACTACT
CACAATGTGGAGTAACATAGAGTAGTAACATACATATGTTATTAGTCTAAGTTACTACCT
CTACAATGGACTAGTTTAGTGTCGTGCGTTGCCACGGAACAACAAACTTACTGTCCCTAC
CATTGTTGTTGGTTGCCAAATCCGATCCAATCTATCAGGTTGTCTTGGTACTACACTCAA
CCCCTTATCCTTCGTTGTCGTTGGTCAATGAGAGGGTCAAGAATCATCCTTCCATCGTCC
TAGCAGAATGCTCGTGCGTTGCCATGGAACCAAAAAATATTTTAATTCATAAATCTATTG
AACTTGTACAAACATTGTTTCAGTCATACAGCAACAAGTATCCATTTCATTCTTGCGTGC
TTCTTTCATAATTGTGTCAGATATATCCTTATCTAATACTCCTATATGACAAGGAATGAC
AAACGAATGGAATGACATCAAACGTGAAGAATACTGATATCCTTTACTGCCCCTAACAGG
ATAACAATCGGGTGGAAAAGAACAAATTAATAAAAGTATAAAAGTAGGTATCCCTCAACT
TATCTTTCACGACATCTAGCTAATAATTCATCTTGTATTGAAATATGAAAATACAAAAAT
AATATTCCGAATCTATCATGTGCGCTGCATACATAGAAGGAAAAATCTTGTATTGAAATA
AATTTATATTATAATATTTCATATTTATGCACACTTCAAGACAAGGTTTTTAGCTATTGT
TGTACTTCCAGCTATATATATATTTTCTTCTAAACTATAATACATACACACGAGAATGCA
CAAACAAATCTCCTGATACAAAATAAAAACTGAGTAATATGCCCAAAATACACGTCAGTG
TCAAATTATACAAGTACAATAATAATTTTGAGGATAGATAGACTAAGACAGACCAAGAAA
CTGCTTGAAAGTTTATTCATTGCAGTACCAAAATAAAAAGGAATAAGCATCGATATTAGG
AGTTGTGCTTCGCATTCCTTTCAAATATGATAATATCATCAAAAAAGTAACGCACTCATA
TAATCAAACTTGCATAAAGTAAGACGCATAAGATCTACATGGGGCTCGACCGTGTCCCCT
GTTATGTCCATCATGTGCGTAGCGCCTCTCACAACATATCAACTTGTTGCTGAGTAAATC
AGTGCATTTCTTTCCTTAGAAGCCTCCGTGGAGTCGCTCCTCTTCCATCTTCGCCTTTGT
GTCCAAACATTGGGCTCCACATAAATAGAGAGATAACCATATATTTGCAATGTTGTTAAT
CTGCATTTCAATATGTACTCAGTACTGGTGTGAAATTGAGCTAGTTTCGTACCTATGGGT
TGATAGACTTCCCAGTGAGAAGTCATGCATCCGTCAATTTGCAGCATACAAACAGTGTCA
TTGATGTGAGTGGATAGTGGTGTACTGGTGTTGATATAAGCAAATCTCTTAATGAACTAA
AGCCATCGGCCATATCTATACCATATGGGACAATGCCTAGTAAAAACAATTTACATTCAC
AAGAGGAAGCTCCTTCATAGGAACGATAGTACTGACAAAAATGTCATGAGCAGCCAGCTG
GTATAGTTCACCATCCTGGCATACCTGACAGCCAGCTGGTACAATTCACCATCCTGGCAT
ACCTAACAGTGCAAATGACATACGACTATCACAACATAAACTTTTTTACCAGTACTAAAT
ATTGTCCGTCGGCTTAAGGCCAACTTATAAAGATAAGTTTCATGGTGTATTAGAGACCAC
TCGGTAATCTAGAATCCAGAAGAAAAAATCGCATATAACAGGTAGCCGGCAAAGCAGATA
ATAAAGCTGAAATATCCCCTTATATTTATTCTAGTAAAGTCTTGCCTTTAATCATCCATC
CATATGTNNTCATAAACAATTGATAAAAGGAGCAGTATGCTTAAGAAAATATTTTTTCTG
TGGAGAGCACTCTAATAAACACAATACGGGTAGATTAAAAGATATCCATCTATATAAAGC
TCTTGTTTGGTTCTACTAAAGGACATATATGAAGAACAAAAATGCACCACACAAGATTGA
CTTTAAAGAAATGACAAGAAAGATGTGTCCAACATAAGAACAACAAGACGCTGGAAAGTC
TATAGTCTTCCTAAGCCACATAATTAATACTGTTGTCACTCCCAGTTAAAAAGCAACAAA
AACTGCCAAACAATTGGCCAATTACCTGAAACATCTCGACGCCAAGGAAGTTCTTCACAT
ACGCGGACCAACGTGCCATTGGAGCTGATGAACCTGAGAGAGTTGAGGTTGTACTTCATG
TCCGTCCTATGCTTGGCAAGCACCATCATGACCAGTAGCATGCAGAAGATGTGCGTTACA
TGGTGATACTACACAACCTTCATGACAGAGTCCATCA