morexGenes - Barley RNA-seq Database

Contig contig_67853
Source Contig contig_67853
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_67853 (8394 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_67853

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75410	3	1800 bp	MLOC_75410.2	Available	Available	LOC_Os12g01220.1, FRAME:+3, EVALUE:1e-65, 13112.m00031 protein expressed protein
MLOC_75411	2	4632 bp	MLOC_75411.1	Available	Available	LOC_Os12g01210.1, FRAME:-3, EVALUE:0.0, 13112.m00030 protein HCF152, putative, expressed
CDS Structure of MLOC_75410

CDS Structure of MLOC_75411

Contig Sequence (8394 bp)

>contig_67853 8394 assembly3_WGSMorex_rbca.fasta
TGTTGAGACAACATAGGCGGAGTTCAAGCTTTGCAAATTCGTTTCCTGCAAATGTATGAA
AGATAGATAGTGCTGATATCCCAATTTTGTGGAAGATATCTCCTTTGAGAGTATACATTT
GGAGTCCTTAGTTATTCTATATGGAGTTGTACATAATTGCATATGTAGCATATAGGCTGA
TATGGCAGTTGCTTGAAACAAGAGATGATCATGCTACAGATGCTACTTACAATTATTTCA
TAAAACAAAACTCAACCAATCAGGCGCTAGTACCTGGTAGCATTGTTTGTAGAAGAATGT
CGGAGGCAGGCAGTCTGTGAAACAAGTTTTGTCCAACGGAGTTGATCCCTGGTGGGTGGG
TTGGTGGCGCTCACACACCGCCCACCAACTGGGCAACGCTCAGTTCTCACTTATAATTCC
ATAGGCAGAACTTAACCATGCAGAGATGCTCAGTAGTTAGTACTGATTCGAATAGTGCCG
TTTGGTTCAACTGTGAGAATGTGAAAGGCAATAGTTGTGCATGCTGTTGGTAAGTTCCTT
GCCGCACGGATCCACCAAGTGAAGGCTGGGTCAATGTGGACGACTCGCTTGTTGCCAGTG
TGGATGCCGTTCTTCGTAACCACCTGGGAATGTGATTGCAGCAGCCGGGTGCGTCGTTGA
GAGATGTCATGTTACCGAGGAAGCTGAACCTCTGGCGTGCCTGGAGGGAGCTTGCGTTGG
CGTGAGTCGCTCTGTTATGCCCATCAATATTTAAAGCGATTGCAGGCAGGTTGTCTCAGC
TCTGAAGTATGGAGGTCAGGACATGTCGAGGCTGGGTGCTATTATAGTGATATTTGACGC
GGAGTTTCATCGCTTCCTGATTCTCCTGATCAGAAGAGATCAAAACCTTGTAGCTCTTGA
GATTGCTTCTGTGTGTCTGTCCGGTACTGGAGCCATGTGGAGTTCCCAGGTGCCGGACCA
GATTGCTCCTGTTGTTGCTACAGACTGTATTCACTGAGATTGCTTCTGTGTGTCTGAATA
ATGATTTCTTTTGCCCTATAAATAAATAAATAACAATTATATGTCTGTAAGATAGTATGG
ATTTTCTTTCTCTTCTGAAATCTGTTGGCTTGCCTTTGTCACTTAAATTCTCATTTTCTT
GAGATGTTTCTTTTGTGTTTGGTTGAAACTTTATTTCTTGAATATTGCCAAAACTTTACT
GGTTGACTGTTCTTTTTTCAGAGAAAAGCTCTTGTGTCACATGACGATGCTACTCAAGGA
AATACATCATCACTTGTAAAGCCTCCTAGATATAAGCAGCCTGAGCACCTAAAAAACAGA
CTCTATCAGGCTTCTGTGCTGAATGGTGATACCGCACAAGCAAATGCGAAGATCTGCTTT
ACTAGGAATACTTCATCACTTGTAAAGCCTCCTAGATATAAGCAGCCTGAGGATTCAAAA
AGCAGACACAGTCTAACACCGCAGCTGCCAACCAATTGCCCTGCGGCTTCAAAGCCTCTT
GTGCATCCTGTAACCAATCAGAGCACTCTTGACACTTTGGTCTCTTCATTACCTGTTCTA
GAGCATGCTAATGTGTGTTCTGGGAAAGAATCCTTGTCAAAAGGTGCAATAACATGCTCA
GCATATTCAAGAAATGCAAATAATCAACCAACACGGAAGGTTGATTGCTCGCCTGCTGGA
AGTGGAGATACCACACCGCCATTGAGTTCAGAAAAGAAAGGCGCTTCCAGAAATGGTGTG
CTAAATGCATATAGCGTTGCATCACATGTAGAAGAAATGGGCATTATCAACAGAACTGGA
CCTGATAAGGATTCCTACTCTCTTAGGGCTATTTGCTCCTCAACCAATGAGCATGGTGAG
GATTCCTGTTCTCATGAAGCCATCGGCTCCTCAATGAACCCTATTGCTGCGATTAGATTG
TCATCTTCTAGCATTTCTTCTCAAGTGTGCTCCCTTAATGATCTCAGTTGTCAAAGCAAG
TCAGACAGTTGTGCTTGTTTAGCAATTGACTTGAAAAATTCTCTTGCCGGAGGAAAAATG
GTCGCAGTTTCTTTGTCAAAAGACAATAGTTGCACTCCAGGTTCTGACTTCTTGCGAGAG
TTTGATTCCTGCAATCAACAGAACGCTGAGTGTTCCACTCTAAAGAAATCAGTAGAATCT
ACAACTTCTGCGGATCAGGTGCCACAATGTGGTAATCCACTTGATACAGAACCAGCTTTA
TCTGACAGCACAACAGATTTGCATGGTTCTTTGTGTAGTGAAGCGGAGCCTAATTCAGCA
GAAGAACCAAATACTGATGGTGGAGCGGAGTTTGGCTCAGGTAGTCCACCAATTGGCAAT
GAACTTCAGCAATTAATTGAGTGTGACCATGACCATGATTATAGGAGTACAGAATCTTCC
CCTATACAAGTAGCAGCGCATGTGCCTTGTGCTGATTTTAGTGATTCGAAAGAAGTCTGC
AAGACAGAAACTCATGGTTCATTGGCAATGGAAAGACGGCCTGCTTTGTTGGACGAACCC
AATACTGAAGATGATATGGAGCTTGACTCGGATAGTCCACTGGTTGGCAAGGAAGAGCTG
TTAGTAGAGTGTGAGAGTGACCATGATAATAGAAGTACAGAATGTTCCCCTATGGAACCA
GCAGTACCTGCGCCTTGTATTGATTTTAGTGATTTAGAAGAAGTCACACTTGACTGTAAG
ACAGAAACACATGATTCTTTGGCAGTGGAAAGACGGTCTGCTTTATTGGAAGAACCAAAT
GCTGAGGATGATATGGATCTTGACACAAACGACTTGTCAGCTTTAGAGGATGCATCACGT
ATAGGGTATGCCTGCACCAAGTGTATCGAATGCATAAAGTTAAGTGGCTTCAATTGCATA
GCGCATTGATTGTGTCTCGTTCTTTTCTTTTGCAGAAAGAACAAGGCAGTGCACAAGCCA
GGCACAAATACCATCCTTAAAGATCATCTAAAACAACTGGTACCATTTTCGGAAGAATGG
CTTGCTGCCATGGAGGCTTGTGGGGAGGTCAGTTTACTTGGATACCACTGCTTTTCAGAC
TTAGCATTTATATGAATTTGGTCCAGGTGATTATCTGAATTTTGTGTCCATGTGATGTTC
TACATACAGCTATAATGTGCCAAATCTCTCCCCCCCTGAGCGACAAACATAATTCTTTAG
TTTTCTAGTCCTGTCTCTGTATATTAGTTATGATGAATTTGATCAAGCATCTGCATGCCA
TATAACTGACAGTTACAAGTTTCTCCGAGTATATCACTATTTTCACCACAATGCTTTTAC
CTGACGGGTAAGTGAAATACATTTTAACAGGAAGTTCTGGAACAGAAGAGTGGAGCTGTG
CAAAATTCTCCTACGGACAAAACTACCCCAGAACCAAGTCCGTGGTCACCGGTACGTTCC
TACGTAATTGCAAATATGGAAATCATCTTCCCTACACATGCATCAAGTGGTGCTTTAATA
TTTCCTTACTCCTTAGATTTAGATGTATAGTTCTTATCAGAAGTTCCATCGTTTTCTTTT
CTGAGGATGAGTCGATGCACTTTTCCTTGCATTCCTTATGACTTCGTTCAAGAGTTTATG
CATGTGTCTTTTTGTAGGTTAAACGCAAAGCTCAAGATGTTGGTCCATTTGACTGTACCA
AGTACTCCAAAAACGTTCGAACATCTGACACTCCTTAACCTGCACTTCACCTTCTCCATC
AGAGAGCAGACACGCTGTACAAAGTCACGCAGAGCTCAGCTCGGAGTGCTGTCACTCCTG
TGATCTACCACTTGATCTTTTGTCCAATCCAACAGCCTCGTTGAAGTGCTTTTGTTGTCC
AATTCAACAATCTTATTTCGCTTAATCAACGCTGTTGATATCACACGCCACAAGCAATGC
TTGTGTGGTAAATAAAGAGATAATTTCTTCTTCTATTTCTTCGGAATCCTCAGTTAGTAG
CTAGCTACTAATCGGTGTTTGGACATTATGCCTGACAAGGTAAAATTTCTTACTATGTCT
GAATGTAATAGAGCGGGCAACATTATGGGATGGAAGATTCATTCATACTACAGGGTAAAA
TTTCCTTACTGCCATTATGTGATGATGGTTGATGATAGTATGATAGTACAACAACAGCAT
TATGTATGTACTGGTGTCTGTCTCTTTGCGACTTTGTAATTGTCAAAACTTTTCCGGGAG
GAGGGAGGGGTCTCTACTCTAGCTGATCGTCGTCGCCGCCGTCGCCGCCGACGAGGGGCC
CGACCCGCCACTCGCTGCCATAGTAGGAGTTGGGCAGGCCGAGCCAGAACTTGAATGCCT
CCGCTGCGCGCTTGCGCTCCCTCCGGCGGTCCTGCCTGGCCTGCGACGCGTGTTTGCTGG
TGAACATCCTCGAGTGCATCTCGATGTATATCTTCTTGTACTTGGTCTTGTTGGGCGCGA
TGCCGTTCTCCTCCATGCACGCCACGATCTCCAGCGCCTTCTTGAAGAAGGCGCCGCGCA
CGCACACGTCCGCCAGCGCGTCCAGGAGCTCCTCGTCCGGCCTCAGCCCCGGCTTGCCGT
TGCCGCTGCCGGCCTCGCACCGCTCCTTCACCTCGTTCCACAGCAGCAGCGCCTCCCCCG
GCTTTCGGGCGACGGCGATCCCCTTGGCCAGGCTGCCGTAGGTCGCCACGTCCGGCTGCA
CGCCGCTCTCCTTCATCCTCTCCACCGTCTGCTTCGCCGTCTCTAGCATCCCCTGCTGGC
AGTACCCCTCCACCAGCATGTTCCACGCCGGCCTGTCCACCGTCACCCTCGGGTCCTTCT
CCATCTCCTCGAACACATTGTGCGCCACCTTGGGCTGCCCCGACGCCGCGAACGCCTTCA
TCAGCGTCGTGTAGCTGACCGTCGACGGCGCCACCCCCCGCGCCCGCATCTCGTTGAACA
GGGCCAGCGCGCCGGCGCTGTCGTCCATCAGGACGCACCCGTCGATGAGGGTGTTGTACG
TCACCACGTCCGCCTCGATGCCGGCGTCCGTCGTCATCTCCTCCAGGAGCTCCCTCGCCC
TGCTCATCTGCAGCTGCTGGCAATACCCCTTGATGAGCACGTTGTACGTCACCCGGCTCG
CCGGGACCCCCGCTCTCGCCATCTCGTCAAGCACGGCGTGCGCGCGCTCCATGTCGCCGG
CCGCCGCGAGGGTCGACACCACCGTCGTGTACGTGACGTGGTCTGGCCGGCTCGCCGGCA
TCGTCTCCCCCTCTCGCCGCATGGCGCGCGCCATGGCCACCACGTCGTCCACGCGCCCGG
CGTTCATGTACCCCTTCATCAGCGTGGTGTACACCCTCGAGTTGGGCGGGTACGTCCTCG
ACAGCAACGGCACCTCGCTGCCTTCCTCCGGCTTTGGCCCGACAATGTCCTCGAGCACGT
CGCTGTGCTCGTCGACGACGATGACAGCAATGCCCTTCTCGTCGTTTCCTTCTACTGCGA
CATGCCTGAGCAGGAGGCAGACGTCGCTGCGGCCTTCCCGCATGGCCTGCACGATCCTCT
CCGCCGTGGGGATGTCGCCGAAGCCGACGTAGGCGGCGACGAGGGAGTGGAAGGTGGTGG
CGCAGGGGGCGATGCCGGAGGAGAGTATCCGCTCGAGCACGCGCGCGACGAGGTCCCGGC
GCCCGGCGCGCGCGCACATCTTGATGGCGACGTTGTAGGTGAGGGCGTCAGGGGCGGCGC
TGGGCCAGCTGCGCATCTCGTCGAACAGCTGGCGGAAGCGGCGGCAATCACCGGCGTCGG
CGCAGGCGCTGAGCACGGCGTTGAACGCGGCCGTGTCGGGGAGCGCGAAGGACGGCGAGG
CGGAGTCCGGAGCGCGACGGAGGTGGTGGAGGACGGCGTCGAAGAGGCGGAGCGCGTGGG
CGGGGCGGAGACGGGAGATGGCGGCGGTGTAGGCGCGGCGGTCGGGGAGGAGGCCACGGC
GGAGCATGGAGAGGAGGAGGGAGTAGGCGAGGTGGGCGCTGCCGGAACGGGCCGCGGCGG
AGGCGGCGAGGGAGAGAGAGTTGGCGTCGAGGAGGTTGAGGCCGCCCTGGGCGCGGAGGC
GGTGCAGCAGGCCCGCGGCGCGGGAGAAGCTGTGGGAGGACGTGGACCTGTAGGAGAGCT
GGGCGAGCAGGCGGGAGGCCGCGGTGGGGGACTCCGGGAGGGAGGGGGAGGCGGCGAAGA
GGCGGTAGGCGGCGTCCGTTTCTCCGGCGCGGAGGAGAGCAAGGAGGGCGTCATCGTCTT
CGTGTGTAGTGGAGAGTGGTGGGGCGGGAGAAATGGACGAGTGGAGGGTGTGGTGGTTGC
CCCGCGAAGTGGAGGAGGCGGTGGTGGGCGGCGAGAATGGCGGCGGGGCGGGGAAGGGGG
CAGCCGGAGGGCCGGGCTGGGCTTGGAGGCGGGGCTTGCCGTGCCCGTGCAGCATGATGG
ATGCTCCGCTCCGCTCTGCTCTGCAGGAGTGGGGAGGAGAAGAGGAGAGGGAGAGGGAGG
GGATGACGCTGACGTGTTAAACCCTGAGTGTCTCACACTCGAATGCAAAAAATCCTTTCC
TCTTTTGTTTCTCCATGTGGAGCCTCTTCCAAATCGTGGCCGAAGCTGTACCAAGCTAGC
CTCACTCGGCCTAGTATCATTCAGAGCCCATTGCTTCATGGACCGTGGGGCTGGGCTTAC
GGTGGAGCCGTGTACTCCTGTTTTTTTTTAAAAGACCGAAATAACTAATTAAAGATGTCG
TTTGCAAATGTTTTTTTTTGCGACGAGTCCTTTGCAAATGTTAATCTCAAACTTCTCTGG
TGATGACGAGTGATGCAGCCTATGTGCATCACTGTCGTCAGTACGGCTGCGTTTGCTACT
TTGTTTTTCTACCATCTTTATAACATTTTACACTTGTATTATAACAGCCTACAACCAAAT
ACATACGCAGGATTGTATTTTCATTGGGCTTCCTAGCCTCCATTTGGAATGTTGTTTTTC
TCCCACCCCTGTTACCTGGCTGCCATAGCCCAGGCTTTCAAAAACACAAACTTTCAACAA
CAACAGACTTTCAGCAACACATAGTGCACTTTTAACAACATAAATTTTTAAATACACACA
TACAGACTTGAAAACAGCATAAACTGCACTTCCATACACATTGCACATGTATAAAATGAG
CTAATTATTTTATTTATAGAACAGTACCACAACATAAACAAAAGATAATATTTTTGCATT
CATCCATTTGAACATAATTCCGATAACTCATAGTGCTCAAAATCATCTGTTTAAATTACA
AATTTATTGAGGCATACTTGTCTCGTCTCGTCCGCTGCTACATAACCAAAGTTAGGACTC
GCAATTGTTCAATCATTATGCATTTAGACATAAAGTATTTTAGGTTGATTAATCCTCGAC
AATAGTTAAAGCAGTGAAGCAGCTTCAGGACAGAAGAATAATCCTTGAAAACAAGACATA
TCTGACCAGGCTAGCAAAGAGCATCTGGATAAGTAACAAGAGCAACATCTGCATAAGTAA
CAAGAGCTTGTCATAATTCAAGAAATTGCTATTAAATAATCATATCTTCCCGTTTGAAAG
AAACTAACTAAAGGGAAGCATCCAAACTAACAAAATTAATGTAATACCCAACAAAGTAAA
AATAAACTCATGTGAGAGGCCATGCACTCATACTCGCGTAAGACAAAGTACAAATGAAAG
AAATCTATACGTAAATGTATTGGTCTATTTGAAGTCTGGACTGTCTCACAACAAATGATT
TGAGGACGGTCAAATTTCAAGGCCCTATTCTGCTTATATATGCAGAATGATAGGATCCTC
ACTAAAAGAACCTAATCAACACACATCTTCTAAGACAGCTAGTGAAACTAGATGTGAGTC
CATGGATGAGACTAGAGTCTCAAAGAACCTAATCAACACAGATCTTCTAAGACGCAGTAT
CAAAGCAAGGAAGGTTATTACATGTGTTATCCATCATCTGTAATTTGTCGTTACTGTTTG
CTTCAACCTAATGATGCAGCAAAAACCTATTAAGCAGGACAATCTTGTGAGAAGTGAAAT
TGAAGAGTTACATAGGAAGGTTTGGCCTTACAATTAATGTCCTACTTATATTAGTTCAAA
GAACTCAACATGCATAGAAGGCTCCTACTAACATTTTAACTTTTAAACTAACTGTGCAAC
AGGGAAGTCCAATTCACCAGGAAAACACGGAACTGTGTCGTAGATTAAACATCATGTCAC
AACAAAAAATGGAACCGAGCAGAAAGGTTTGGTGCACTGTCCTTTGTCAAAAACTTTAGT
CAAATGATGGCACATTATCAGAAATAAGTTAAATTAACATGTTTTTGGTTCATATACATT
GGGCCTTCAACTATGAACATGTTTCATGCAGTACTACATGTATGTATGTATAAG