Map Locations of contig_6785 (3595 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_6785

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75409 1 280 bp AK359078 Not available Available None





CDS Structure of MLOC_75409






Contig Sequence (3595 bp)

>contig_6785 3595 assembly3_WGSMorex_rbca.fasta
ATATTGGATCCTACATATTCTACGTCAATATCCAATGTGCCTGATTTTTGGGTGAGGATG
ATCGTCTACACAAGCCACGTCACTTTCAGACATGGAAGAGGAACCACCGCAAGATCTCGT
GGCATAGCTACCCCTACAAGCCCCCCGACCACACTCGTAGACATGCGAAGAACAATCCGT
AAACAGTAGTCTATTAAGATACCGAACAATTCGTGAACATGCCGCAAGATCTGGTGGCAT
AGCTACCCCTATTAAGTACCGCCCAAAGTCCTCCGTCCCGCCTAACCCTAGCCTTGTTGA
CCCGCAAATCTAGCCCTTTGACTTTCGTCGGACGGGTTTTGACCGATGGACCTTTTCAAC
TAGTTGTTTTAGGTCAGCCCGTAGAGACACCCTCTCATGGATATAGATTTGAAATTTGTC
TAATTTCACAAAGAATGAAAAAATACAAAAAATTGAAAACAAGAGGGTGTTTTGTGTAAA
TCTGAAGCAAACATGAGTTAAGTTTGTTCAAATTAAAGAACATATTATAGCAACAGAATC
CTTTCAAGATTCTTATAAAAAAATGTCAAAATAGATGCGATTATTAATTATTTGTGATTT
TAATAAAGTATAGGGACCTATACGAAAAAAGTATGTGAGAGCACATTACTAGATAACATG
CTCGAAAACAAATACAAACTACATATTCATAATTTATGGAAAATTCTATCCCAAACTGAT
ATATAATTTACGTATGTTTATGTTAAGATAAGTCACATTTAAGTTAACCAAAATTATATT
TTAAAAAAATGGTGAAAAAAATCAGATAATACGGCATAGATGTCCATCCCAAGAAGCTAT
CAGATGACGACATGTGGCAAGGCTATGCCAACAGCCTGGCCGTCGGAGCCGTCAGCGTAT
ATTTGACGGCGTCAATCCACCGTCTATCACGAGGCACACGTGTATGCCGACGGATGAACT
ATGTCGACGGCCACCATAGGCATAGATTCACCTATGCCGACGGATGCTGTAGGCATACCT
CGACATATGCTAACGGCTTTTCTGCCCCGACGGCTGCCTATCTACCGTCGGCGTTGGTCG
ACGGGGGGCGTCGGCATAGATAAAGCCGTCGGGACAAACCTTTATTTCGGTAGTGTGTCA
CGCTCGAAGCTGTCGTGGCGTGGTTTTGATCGGATGGCCACCAGCACACGGATGAGATGG
CTGGATAGCCGGATGATTAGAAATCATCCGGTTAAGCTGCCGGCAAAATTAACACTACAG
TTTTGCTAGAAGTCATCTACCTGAGTTTTAGTTATGGCTAATCAACCTTTTATATAGTCA
ATGAATGTGATATTTTAGGATGTGTGTGTGTTGATATGATTGTATCTGTTTTCATTTTTG
ATGTGTATGAGACTAAATTATATCTCATTTAAATGAGTTTTAGACACTCCCTTAATATTG
GAACACGTTAGTGAGACATGAAGATGATTCCTCCTACACATGAACAGTGTTATTCTAGGT
CTGATCCTATTTTACATATACTAGTACTTCGTACTCCGACGCTCAGTTATGCAGTATAGG
CTGATAATCAAACTTATGGTCAAGGACATGATACATATCTCGACGAGTATGGTACAACAC
TATGGATGAGATAACCGGGAGTCCGCAGACCCCCGGGTGCTGAAAAACCGGTCTCGTAAT
ACAATTCAGGAAAGATAAAACTTCACACCTTGCCGCACGTCAACCTCTCGTTACGATGGA
TAAGTATGCAACGAATGCACTAGAAGGACAAGTGGAGGTGATGCTTGGCCCCGTAGGGTA
GCAGAGCTCCGTTCGGACGCAAGAGTCTCGATCTCATCCGTTCCGCGCGTCGTTCTCAGC
ACGATCCGCACGGTACCATTTCAGCGCACGAGCTGGTTAGGTGAGAGCATCTACAGCGGA
ACTCGCAAATCTCATTCCTCAAACATCTGCGGTCCGACGCGTTTATGGACATAGACCGAC
CACGTCTCAAACATCTGGATATCTTAAATTAAAAACAACAAATTCATATTATTACATGCA
ACGTAAACCTAATACTAAACAAAGCTCGTTTGGCTCCATCGTACCCAAGTCCGATGGCTG
GTTGTGCCTAGGGGCGTAGTCAGGATTATCAACCACTGGGTTCAGTTCTAGTAAAGAATG
GGTTCAATTCTTTGCTTAGTTTTAAGCTAGTGTAAATCTATAAGGGACATGTCAAATTTC
GTTGGGTACACTTGAACCCAATGCTAATGAGCTGGCTGCGCTCCTCGTTGTGCCCCTTAC
AGTGTCGGTCTGGTCGCCGGCGAGGTACAGTAGGACATGGGATACTAGCCGGTTCACGAG
AGTCGAGCTCTCGTCGTCTGCCATGTCCTACTTTTCCTCGTCGGAACACGTAATCAGACG
GTGTCAGCCGATGACGGACCCTTCCTGGAAGGAGCTTACGTCCACCACGACGGGGTTGCG
TCACCCACACTGGTGCACTCTACGAGGCCCAGAAGAGTGTGGCTCCGTCTCTCCAACATC
CACTGCCACGAGGGCCTCCGCCGCATCTCATGCCCGCTGCCTCGCTCAACGAACCCGTCG
TGCCAGGACATCGTCCGAGGATGGACATGCTTCGTGCTCGGCGCGCCAACGAAGGGGTTG
CGCTTCTGCCACGGCGTTCGGACGCCATACGGACCGCACCGCCTCCGGTGAGCTAGGCAG
CGACGACGGATACAAGCACCGGTTGTGCGAACGCAAATGATTCACGATGTTGCAAGTCCG
AGCGCTGTCGTCGTGCGGCCGTCTTCCGTGAGCGGTGGAGTGCAAGTCGGACGGTCATCT
CCTCCTCAGGGCCGCGTGGGACGAGCTTGTGGTCGACGGATGTGGAGGTGAAGGGCTCAG
ATCCGTTGCCTGCCATGCCGGAGGTGAGCTTGGAGGGAAAGCAAAGGAAAGTGAAATGAA
GTGGCTAGGGTTTGGTCCGACGAGCGGATGCGGACGAATATACGTGGGATAGATGCGGGC
GTGCGGACGTGCCCAGGCGTCCGGACTGTCTTATATCCGTTTTATATTTAGACTGAGAAT
GAGAGAAGTCGGTCAGTCTGGCACGAGGACGGTTTGATACGTGCGTCTACGTCGCTTGTT
CGTGATCCATTAATGACCGAGGGACTGTTCGGATGTTCGAGAAGGACTTAACAGGTGTGA
TTGTAGACGCTCTCACGAGCATTATTTGCTTACCCTTCTGGAAATGGAGCAATCAGGAAT
GGACCTTCGTCACCGGCATCAATGTACTGTAGACGACAAGGATGTCCATGTATAAAGTAT
AGTACATCGAACCGCATGCACTGCATGCGCTGAACGTATAGCATGAGGGAGCACTTGCAA
TTGCAAATCTAGATCTTGTCCTAATAATAAGTTAATAACCAATAATATGAAATACAATAG
CATATTAATTTAATCACGCGGTTTTCCGCCGGAGAGGAGGGAGTCGGCGACCAGCCTCTC
GAGATTGGCGCGCGAGCGCCCGCCGGGGCGCGGGGCGGGGAAGGCGGGGTACACCCACCA
CCACCGCCCGCGGGGGACCGCGCGGCACGGTCGCCCGCACCTCGACACAACCCTA