morexGenes - Barley RNA-seq Database

Contig contig_67836

Source Contig contig_67836

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_67836 (2608 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_67836

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75402	1	684 bp	AK368098	Available	Available	None

CDS Structure of MLOC_75402

Contig Sequence (2608 bp)

>contig_67836 2608 assembly3_WGSMorex_rbca.fasta
GGGCGCGGGGGTGGTGGAGGGGTCCCAGACCCCGCTGTCCAGGGGCAACGGCGGCGGCGC
CAACTCGGTGGCGCCGGGGTACACCAAAGGCGACGGCCTGGGGGCGGAGATCGTGGGGAC
CTTTGTGCTCGTGTACACCGTCTTCTCCGCCACCGACGCCAAGCGCAGCGCCAGAGACTC
CCACGTCCCCGTAAGTGCACCTGCGCGTGGAGCATGTCATTTCGTGGACGATGAACAAAT
TAACTGATATATGTATGGATGGACGGATGGATTTGGTGCAGATTTTGGCGCCGCTGCCGA
TCGGGTTCGCGGTGTTCCTGGTGCACCTGGCGACAATCCCCATCACCGGCACCGGCATCA
ACCCGGCGCGCTCCCTCGGCGCCGCCATCATCTACAACAAGAAGCAGTCGTGGGACGACC
ACGTAAGAAGCATCAATTAAGTAACATCTAGGAGTATCAGTCTCTAGTTAGAGACTAATC
ATTCATGCTTAGGAGGAATTAAGCTAGCTTGATGATCATGGTTTGAACATGCAGTGGATC
TTCTGGGTGGGCCCGTTCACCGGCGCGGCGCTGGCGGCCATCTACCACGTGGTGGTGATC
AGGGCCATCCCCTTCAAGAGCCGCGACTAGTATACTCAATCAGCCATGGAATGGATGGAA
TCCTATCGCGTATTGTTCATCAACCATCATTTGTGCTGATCGTTGCTCGTGCATTGCTAC
GTGGCTGAATCATCGCCGGCACCTCCTGTAATTATCGGTCTACCGTACTGTTCTTGAGCG
AGCGAGCGAGCGTGTGTGTGTATCTTTCAGTGTTGTCTACGTTACTAGTGTGGTGCACTT
CTTCACTGCACCTACCCAAAATGTGCAAACGTCAGTACTTGTGGTTCCCTCTCTTTCGTA
AGCAATGCATGTAGTATAAAATAACAAGGAATGAAGATCGAATTAACGATCTATCTGTTA
AATGGAGTGCTGCTGCATCAATACTTGTTCGGTTCCAAAATTTCTGGGTTTGTACTAAGT
CAAACTTCTTTAAGTTTGACCAACTTTCTGGAAAAAAATTATAATATCTACCCCATTAAA
TGCAGATAATGAAAATATATGTTATAATGAAGCTAATTTGATGTTGCGGATGATGGAACA
TTTTATAAAAAGTTGCTCACATCTAAAGACACTCCTAGGAGAAAACTTATAAGTAGAAAC
CTAACACAAGCGCGGGACAGGGACACATCGGTAATCCTAATTAGTAGTAGGGCGGGGCAC
GTTCTAGCGCTGCTAAGTAAATAGTAGTAGCGCAAGGTGGCTGGCAGGCGCTACTGCTAA
GCTGTCTCATCATCACCCACCGGAGCTGTCCATAGTAGTAGCGTTTGGTTCAAACCATCG
CTACTACTATTAATTTAGCTGTAGCACTAAAACAAGTCGAGCGCTTGTACTACGGCCAAC
CCGGGCCCAGCTAACAGGTCCGACTTAGCAGTACTGTGGGACGTCGCCATGCGGTACTGC
TAGGTGGGCTAGCAGAAGCGCGGGCCGGTGACCCGCGCTAGTGCTAACCCATCTTATCTC
CGGCCCGCGTGCGTGCACGGCCTCACTCTCCCTCTCCATCTCCCCCGACCGCTACCGCCA
TCTGCTACTGCCGCGCCCGGCCATCGCCGTGCGTTGCCGTCGTCGCCCTCCCGATATGTC
TCCCTCCCACCCCTCTCCCTTCATCCCTCCCTTCTCCCTCTGTCATATCCCTCCGTTCTC
CCTTCCTCCCTCCTACACTCTCCCTCCATCCATACATCCATCCCTCTCTCCCACTCTCTC
CCTCTCACTCTCTCCCTCCCTCCCTCCCTCCCCTTCTGATAGAATTTAGTTTTAGTAATT
ATATAGGGTTAGAACTAGGATGGATGGATAGATGTTAGGGTTAGAACTAGGATAGTTTTA
GTATTTTTTTGAAATGAAAATGTGAAATACAATTGTTTTGAAATGAAAATGAAAATGCAA
ACGTGAATTGAAAGTGAAAATAAAAAAGTGAAAATGAAAATGAAAATGTGAAAATGAAAA
TGTGGAAACGAAAATGAAAATGTGATTTAAAAATGAAAATGAAAAGGTGAAAATGAAAAT
GAAAATGAATATGATACTGTGAAAATGAAAATGAAAATGAAAATGTGAAATGAAAATGAA
ACCTCCAAGTGGCCTATGTTTTGCCGATATGTTGATTCATTTTCGTTTCGGCAAATTCCA
TGCGCTCGATATGTCTTGTTTTTAGAAAATGTTATGCCGAAATTTTGTTAGAATAGAAAT
TAGATGACATTCCAGCAAAACATAGCTCATTTTGATGTCATTACTCCATAAATGTAATGT
TAATTGACTAATGCTTATAGGGTTGAATTTCAGTCTGTCAGAGCTCCGTGTGTGACTTTC
AGTATGTTCTTAATGAAGGAATATAGACTATTATCGTGGGGGTTGCTTCCTCTTATTCTC
TTCTCGCAATATATACCTTTGTATAATGCGCGAGGAGAGAAGAAGAGGTGCGACCATCAT
CGACGGTCAAAATATTAGTGTGAGGGAGTGTCCACCAACATACACCACCATATCAATGTG
AGAGAGTGTGCACCATATACACAATGAG