Contig Data
morexGenes
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Map Locations of contig_6783 (5184 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_6783

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75398 1 678 bp MLOC_75398.1 Available Available None
MLOC_75399 1 607 bp MLOC_75399.1 Available Available None
MLOC_75400 1 963 bp MLOC_75400.1 Available Available None
MLOC_75397 1 767 bp AK371265 Available Available None





CDS Structure of MLOC_75398






CDS Structure of MLOC_75399






CDS Structure of MLOC_75400






CDS Structure of MLOC_75397






Contig Sequence (5184 bp)

>contig_6783 5184 assembly3_WGSMorex_rbca.fasta
GCGGGCGCCAGGGTGTGGCCGCGCACCGGGTGCACCTTCGACGGCAGCGGCCGCGGCCGG
TGCATCACCGGCGACTGCAACGGTGTGCTGGCATGCCGGGTGTCCGGCCAGCAGCCGACC
ACGCTGGCCGAGTACACCCTGGGCCAGGGCGCGAACAAGGACTTCTTCGACCTGTCCGTC
ATCGACGGGTTCAACGTGCCGATGAGCTTCGAGCCCGTGGGAGGGTGCCGTGCTGCGCGG
TGCGCCACGGACATCACCAAGGATTGCCTCAAGGAGCTGCAGGTGCCGGGAGGGTGCGCG
AGCGCGTGCGGCAAGTTCGGCGGCGACACCTACTGCTGCCGTGGCCAGTTTGAGCACAAC
TGCCCCCCGACCAACTACTCAATGTTCTTCAAGGGCAAATGCCCCGACGCCTATAGCTAT
GCGAAGGACGACCAGACCAGCACCTTCACCTGCCCTGCCGGAACCAACTACCAGATCGTC
CTCTGCCCTTAGATCAATATCAGTCAATTACTTGGGTCAATAAGGAATAAGGACTACTCT
TAGTCTGCTTATGATCGAGGATCATTTGTATGTGCTATGTCATATATGCATGCTAGTGCC
TGTATGTGGATCAATTATAAATAAATGGTTAAATAATATGAGTATGTCACGAGGTGTGTT
TTATGGGTGCTGAAAATCGACTTAAAATTCTTGCAGTGCACCACCACCCTCTATCTTCAT
ATACGAGTTGGGACTTGGGAAGGTTTTTATTTTGGAAACAACAAAAATTCGTACCTCATT
GAAACATGCAAAATTTCAGAATTTTCGCATATATTTGAAATCATTTCGGATTCAAAGATT
TTAAATTTGATTTAATTTTAATGAAATCAGTTTGAATATGCTGTGATATTTCAGGGTTAA
ACATATTTCGGTCACCACTGAAATATGTGAAATTTCGGGAATTTCACTGAAATTTCATTG
AAACTTTTAACCCGTGGGAGTGAGTCGGTGATGTTCCACTGAGGTAGCCAGGGTTCAATG
CACCTTGTCGCCACCTCTTCCTGATGCCAATTCACTCCTTCAAAAATCGTTTTCCCGACC
TTCGTTGGGCAGAATCTAAATTCTCTATTATGAGATGTGGCGAAATAGGGCGACCATGCA
CGAGGGATATTAAGATCTCATGGTGGTACTCAAGGGATTGGAGGATTTAAACATTCATTT
GTTGGCCTTTCCAGTTGGGTGGATTTCACAATTTTGTAAAAAAAGTAGGTGGCACTCAAT
TGTTGCTTGAAGTTGGGATTTCTCTTATCCCATTGCGGACCAATCAAACATTTTGACTAG
TCTCATGCAAAAAACATATTTTCCACCCTGTGCAATATTATTAAGTATAAGAGAGGATAG
ATATATACTAGATTTCGTGAAATATATTTATAGTCAATAGTTAGTTTCGTGTGAACCAAC
ATTTTCTAATATGAAACTAATGTGTGAAAAACCATCTTGAAGAATATAACAATAATGCAA
ATTGAAGTTTTATATTTTAAACAAGATGAAGCATATATAGTTCATAGTTCAAAATGTTAA
CATGATAGTAGTAGTAGTACTAGTAGTAGTAGGAGGAGGAAGAGGAGCAGTAGTAATAAC
AGCAGTAGTAGTAGCAGCATCGGTGATAATTCAATTCGGTGCATGAGCTCATCTATACTC
GACAAACAAAAAAAATAAAAAATAGATGAAAAACTTAAAATAACCATTTTTGTGTCATTC
AAGATGCTCAAATGGTTGATGCCAGTACAAATTTACTGCTGACAAGTTATATTAGTATTG
GATTTGACATAATTTATTGGAATTGGGTTAGAGCCGATCAATGTGCACCACATGACATAT
GTGGGGAACAACCAAACTTTTCAAAAGAACAATGAAGACAACTAGTGAAGTAGCTAGCTG
TGGAAATAAAGGGCCATATTCCACGTTCGTGGTGTATATCTATCCAAGCGTACGTACGTA
CACGTTCACTTTGCTTGTGCTAGTTTTCTTCTAGCCTAGACAAGACTTCCACATGCATGA
TCATGATGCGACAGGCGCAACAGACAGACAGCCAGCTTGCTACACGATCGAGGCGTCACG
TCACACACACACATACTCAGAATGTATGGTGTATGCCGAACTTTACCTTGATCGGTCTTG
ACTATACGTCGACGCAATGCACTAGCTAGCTAGCCATCATATTTTGCGGAAGAAGACGAG
ATCAATGCTGTCTCGTGCGCAAGTTCATGGAAGATGGTTATTGTACAGACTATGGATGGA
TGGAGACGAAGGACAGACCTCTGGCGGTGCATTGATTTGTAGTGAGGAAACTGGCAGGAA
ATTTTTGGCTGGCCGTACGTGTAGAAAATGTGGGAGGCGACGAAACAAACCGAATTAAGT
GGAAGACGCTAGCTCTTCCCTTACATTGCATGCACGTTTGATCGATTGATCTCTCCGTTT
CATGCGGCGTCCATTGCGCATCACGCTCGGCTGTGTACGTGCATGTGTGCCTTGTTTTGG
AACACCTCAATATCGTTTTGTGGTATCCCTAACCCATCAGGTCTCAAGTCCCGATGTTCG
TATTATTTTTGTTTCTATTTCAGGATTTAAGAACAACTATTTGTAAATTCCCTTATATTT
TCCTTTTGCCGCCGTTGGGAAAATCGTCTTCCTTCTAGATACTACCGCGTGTGCCTCTTT
GCTCCACCCTGCCTAAGTTGCTACCTCTGTGAGAGCATCTTTTACCGATTCCATATAATT
TAGAGCAGTAAGAGATGGAAAGACTGCATCGAGCGTGAAGATCTTTAAGAGGTGATGCTC
GTCACGGCAGATGAGAACGTTGCGAGAATCCCAAATCTCCCAAAGTATAGTAAGGCCGAA
CATTGGGGTCGAGGCTCGTTGGGGATGGGGCCTTGTCGTTTTGAGTTTTTTAAGACATTG
ATCATGTTCAAATCGAGATTTGGGAATTTACAACTGGGGCATGCAGTATACACGGCATTT
TTTTGTGTAACTTTGAGATTAAGGATGCCCTATACATCCAGAAGACTCGCATACAAAAGA
ACGGACGTGCGTACGTACACGGATGTGTGTGATGCGTGATGGATGCCACATACTCGTTTC
TAAATATAAGTTTTTCTAAAGATTTCACTATAAAAGACTACATACGGATGCATATAAACA
TACTTTAGAGTGAAGATTCACTCATTTTGCTCCCTATGTAGTCCTTTAAAATCTCCATAT
TTAGGAACGGATGGAGTAAAACGGAGAGATTGATCCATCAAACGTGCATGCAGCTGGGTG
GCTAGCTAGCTTCTCTACCACTTTGGTTTCTTTCATTGTCACCCACTGTCACCCACTTTT
TTCTACAAAGCCAGCTAAGAAATTTCCCCAAGTTTCTTGTCCGCAAATCAATGCAGTGCA
ACCCATCCACATGTGAAGTACAATCGGTTTTTCTCCAAGGAAGGACTTGTACATGAGACA
ATCTCGACAATTTCCTCGTTTGTTAATTCTGGCAGATCTATATCAAGTCCTTATCATACA
ACGACTGCAATATATACCAGTACATCCCAAAATACGATGGCCTGTACGTCGACGTATAGT
CTAGAGTCAAGACCGATCAAGGAATAATTTGGCGTACAGCGTATGATTTCTGTGTGTGTG
ATGTGACGCCTCGATCGTGTACTACGGCAAGGCTGATATATTGCGCTTGTCAAGTCATGC
ATGCATGTGGAAGTCTTGTCTAAGAAAGAGCGCTCGTCAAGCCTAGAAGAAAACTTGCAC
AAGCAAGGACACGTGCACGCATGGATAGATATACACCTTGAACGTGAAATATATATAGCC
CTTTTTTTTCACATCTAGATGATGTTTGAGATATGCAAAATTAATGTCTCTAACTTTTTT
CTTTGAACAAGGTACAAACGCAAGAGTTCATATACACGCACATATACTCACTCCTATGAA
TTCACACACGCAAACCTTATCCTTATTAGCATCTCAGAGAGACTGAACCGGCATATCATC
TTGATATTTCCGACAATAGCTTTGCCCTAGCGGGGGAATTGTCAGGAGCTTTGCTTCAGC
GACAACAGTGGTTTTTGTACAAGGCAAAGCACGTGCCATAGTCAGCGGGAGCCGCCGGTC
TTGAATCCTCCGGCTCTCTTCTTCGCGTACCGGTTCATCAAGTAGGAAGCTACCCCAGCA
GTCGTGATTGTAACGGCTGGTTCATGTTTTTACCGCAAGCACTTTAACTCCGGTTCATGT
CGTTGTTGTTCCTTTTCAGTTTCTCTAGCTATTTAAACAGGGGAATTCGTGAGGAGAGGA
TTATTCTTGATGTAATCGGGCTTTGCCCTAGCGCCGCCGTGTTCCGGCTGGCCAAAGCCT
AGTTCCAATTGGAGCGAATTTCTGTCTTGCGTGTGAAACTGAAGCAAGAACTCTGACAGT
CTTAGAAGAGCCTGTCAGAAGGTGCACCCGGTGCGCGACCACACCGTGGCGCCCGGGGTG
CTAGCGGGCATGTTGAGCGCCCTGGCCCGGGTTGAGAAGCACACCGGCGCCTGGGAGTGT
GCCCAGCCACACCGTGTAGGAGCACCCTCGGTGGCGGCACAGGCCGTTCCGCCGATGTCT
ATTCCACCGCCGGCGCGGAGCTTTGAAGGTAGTTCAGGAACGGATGCAGATTCTTGTCTG
CATCCACGACATATGAAAAACAAAACATGTGTTGGGTTCATGGTTGATGGATGGCAGATA
TGATTTCCTCCTTCGACGTCTTATTTGTGGTGGGGTGTCCGGGGTGTTGCCCGGTCTGAT
TCGTTCAACGACAATGGCTTCATCTTTGATGAGTCACCTTGGAGTGTTATGCGAATTGAC
ATGAAATTATTGGAATCAGGTTAGAGACAGTTAATATGCTGGGAACGAGCAAACTTTTAT
AAGAGACAGTTAATCAGGCTAGTTGTGGAAAAAGGGGCCATATTCCACGTTCGTGGTGTA
TATCTCTCCATGCGTACGTACGTACACGTTCACTTTGCTTGTGCTAGTTTTCCTCTAGCC
TAGACAAGACTTCCACATGCATGACCATGTCATATCATGCATGCATGTGGAAACTATATC
TATAACTATTAATAAGAAAAAACTAGATGATGCTTGGGCCGTTGCTGCAGGAACTATTAA
TGATATTTGTTGTACCGCTTCCAT