Map Locations of contig_67679 (10430 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_67679

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75332 12 3284 bp MLOC_75332.6 Available Available LOC_Os02g11960.1, FRAME:-3, EVALUE:0.0, 13102.m01296 protein ABC transporter, ATP-binding protein, putative





CDS Structure of MLOC_75332






Contig Sequence (10430 bp)

>contig_67679 10430 assembly3_WGSMorex_rbca.fasta
CGGGGGGGGGGGGGGGGGGGTGTGGGGGGGGGGGGTGGTCCGGGGGAGGGGGCCAGCGTG
GGTGGTGACGGCGGCGGTGACTTCGTGGGCAAGGAGAGAGGCGAGCCCGTGCTCCTGGTG
TGGTCATGTTTTTTTGCTGGGGGCCTGCGGGTTGATTACTCCTACGAAATGTTTTTTGTA
GATCCACTTAAAGGGGGAACTGCGGGTTGAATAACAGAAAATACAGGGATGTTTTTGCAA
AACGACCGCGACGGGTTTTCCGACAAAAACGATAGCCTCTTTATTATTAGGTAAATATAT
ATATATGTAATAATCTGAAGCTACACCTTCCATAGTCCAAAGTACAAACTCATTTGAAGC
CTTAAAGCTACGTGCACTGCCAATTTGCCACACAACGATATCTCTGAAGCTGCAACTGTG
ATGAACTGCAAACAGCGACTCTTCTTGGTCGGATTATCTTGCCGATCAGGTGACAGAGGA
TGCCTCGCTCTCCTTGGCAACTCTGATGAACACATCCTCCAGTGTCGTATCAGCAAGGCC
CCACGCAAGAATGGTCATCCTGCTCTTCGCGCTCTCCATGGCATGGAACACCGCCGATAT
CCTCACCTCCTGCTTTGGCATCTCGAACTTCTGCGTCCCAGAGATGCGGTACACCCTGCT
CACCGCCGGCGAGATGGACCGGACTAGCTTTGCCACCTCCTCCTCCGCCTCCTCACTCGC
CACGGTCGTTATCGTTAGGACATATGAGCCTCCGTACTTGGTTTTCAGCTGGAAAAGGCG
GATTGGGTGGGGCTGCGTTAGCATCTGAAATCAATGATCTTGCGTGAAGATATGATCAAT
TTACTGGCGTACGTTAATTGTACCTCTCTTGAGTTTCCGATGCACTGCAAGGTACCATCC
GCGATTATTCCTATCCGATCGCATAGAACTTCGGCTTCTTCCATTGAATGTGCTGCGAGA
TTGATGGAAGTATGTTTTGAACTTTGGTCATGTGATGTCAACCTCAAGATGCACACACAC
GAAAATGCAATGATGAGCTGAATATACTGCTGTAGGAGAACTGAAGGTAAAGTACTGTAC
TCGTGAGAATTATGGCCCTGTCCTGTTTGGCAGACTTGACGGCTTTCCATAGGTCTTTCC
TTGATGCCGGATCTAAGCCAGAACTTGGTTCATCCATATAAACAACCTACAAATTTCTCC
AAGCACGAACGTTCAGAAGCTCATCAAATCATGAATGAATTCAGTTGATAAATACAAGTA
CCTTAGGGTCACCAATTAGAGAGATGGCGACGCTGAGACGACGTTTCATGCCACCGCTGT
ATTTTTGTACAAGCTTATCGGGAACACCACCATCAAACAAACGCACACTTCTCAGAGATT
GTTCAATAGCCTGGAAAGAATTTATGTGAGGTTTTTATTAGTTTTTTCTGTACAGCATGA
TAATTTGGTTTTTATCCAAAAAAACTGGCAATATGTGATGATAAAACAGCGAGTTCTATG
CATAATATGTGAAAATAAATCGAGTTCCAGGAAAATGTGCATGAGTTGAATATGATAATT
CTTGCCTGGAAATCATGGCTGCATCTGTACACTAAAATCTTAATCAGTTATTTTGGCTTC
CACTTTTATATTGAGCCTAGGTATATACTGACTCCTAATTTTCCAACAAAAGAGTTTATA
TCTTACATTTTGTATTGGCGAATTTGTACAAGTGTACAGGTTGGCTCAGAACATATCAGC
CCTATAGGAAAATGATGTGTTCAGCTTTAATCAGCTGGTCAGAGAAATGACATTATGGTG
CTTCAATGTTAAGTGGTAAATGGTGACGAGTTCATCATATCCATGCATGGAAAATATCAC
TATATTAGACATACTGTAACACATTACCTGAGCTAATTTTGCACCCTTCAGTTTCTTGAG
CCTGCCGTAGAACATCAAATGCTCTCGTCCAGTCAGATTTTCCCAAAGCAAGCTGCATGG
TGACATTCGGAGGAGGAGAAAGCAATCAATCACAATTTCAAAACTACATGGTCTTACACT
AACCTAGAACAAACTCGAAACAATCTGAGTGAGAGAGATAAGAAAATACTCATGCTGGGG
ACAAACACCAATTCCTGTATAAATTGTGTCCATGTGCAACCTTATGTCCATTCCTTCGAT
GTACGCGGTGCCAGACGTAGGTTTAGTAAATCCAGTGAGCTGTTGTCAGGTTAGAAGTCC
TTAGTGCCGTTTGGGATAGACAGCAAATTCCTCAGTGCAGTCCTACTAGTTCATGAACCC
CTAAACGTGTTCTTTGTTGCTGTAAAGAAATGTATGGCTGCACTTTTGAATGGTCATATT
TCCTGGAAGGGATGTGCCAGGAATGATTTACGTTCTACTCCATCCGCTTCACTATATCTG
CCCAGTTCATATTTCTAGGAGGCACAGTATATATAATGACACATAATAAAATCAGACTAT
GCTTTGCCCCATTTAGATTTTGATCAAGGTAGACCTATAGTAAATTATGGTATCTATAAA
GTTCATGCTTACCATGTTGATGAGAGTGGTTTTTCCAGCACCATTTGGACCAAGAACACC
AAAGCACTGCCCACGTGCCATTGAAAGGGACAACTCTCTGACAGCAATTTTCTTTGAATT
GCCATCTTTTCCAGGGTACACTTTCTTAAGGTTGTCACATATGACTGAATAATTACTATT
TGGTTCTTGTAAGAGCTGTCCAACCATCTCTCTCTGCAAGGAAATATGTAAAGCTACGTT
AGTATGCCATTGCGATTCGGCAAACACATACACACACACACTCACACATTCAAGCAGGAC
TAGAATGTCAACCTATATGATTACACTCTAGGTTAAGCAGTTATAACACTGTATACAGCA
AGGATCATGAGGCTAACAACATGGAGTTTGCTACGATGTAAAAAAGGAGAAAGAAATTCA
ACACGACAATGATCATAAGGTTAACAAAATCAATCAGAGAACCAAGAGCTATTTTTTGTA
AGGAACAAAGATAACACACCTCTTTGATAACATCTGTCCTCTCCATTTCAACAGAAGCTT
TGAACTCTTGAATCTGTGTGGTCTGCTGTTCAACAGATTGAGAACGGTTCCCAGCCCGGC
GAGAGTGAAGAAGTAATACTGCTTTTCTAATTCCACTTTGAAAGGAACCAAAGTGATCCA
GATAGAATGATAATAAAAGGAATAGGATCCATTCGAGTACCATTATGGTTAAAACACTCG
CCATTCCATTTTTGGGATCATTCAGGTCACTCCACTGCATCCCCGTGCGGTCAATCTGAC
TTACGAGGAATGCAGATTGAGAAAATTCATAGACAATTCGGTACAAAGAAAATGGAGGGA
AAAGTTCCAAAAGTATAATCCAGCTTCCTTGAAATGAACAAATATAAAATTCAACACAAA
TTATTTGAGTGATGGGACAAAAGCTTACGTCAAAGAAGCCATAGAATCATAATGTCAACT
GCATAATGAACTTCTACAAAGATAAACTTGCATACATACTTGAGATGAAAATGTCTTCGA
TATAGGGCTTGAAAAAAAAATCTGCTATAAGGCCGGACCCAAATACGTAGAAATATCCTG
TCACTGCAGCGTGATTTGTCAACTAATCAGTGTAGATAATTTCATACCATCTGATGCAAT
GGATGTAGCAATACTCTTTATGGAAGCATACCAGCAGCTGTTCTCACATTTGAGAAGCAT
GTTGCCATAAGAAATGCAAATGAAATTTGCAAGCTCATATAAGCAAAGTAGAACACAAAC
TGTACGCCATAGCTATTCAGTCGAAAGAATGTAAAACCTGAAAAATAGACATGAAACTAT
CAGAAATGTCCTTGAAATTTATAACCGTTCGACGACATTCCTTTATACAAATAAAATTAG
CATATTGATCAACCTAACCAAGAACAACAAAAATTGGTCCGATACCAATTCCCAGATTAT
CAAAGAGAAGTAATCCTTATATTTTATTGCACAAAGAATACATCCATAGTAATAGAAGTA
TTATCTTACCAAACACAGTACCAAATACCATGAAGGACAGCAAGTATAGCATGGACAGAA
GAATAAAATAGCAATAGGATATAGTCCAATATGGCAAATCACCAAGACCATGCATCTTCA
TCATAATCCTAAGCTTCTTTTGCTTCTCGTATACAATGTTGGTCAAAATTACCTGTAGCA
TCAATTCATTCTTCTATAAGCTAAAAGTTGCTACCATATTTATTTGCTTGTACAACTGTC
AGAAAATAACATTCCAAAATATTCAAATGGACTCATGTTGAAAATAAATTCATAAAGACC
TGCCATACCGGGAAAAGGAGCTGGATAGTCAATACATAAGGCAGCGGTCCTATTGTTGAA
GTTAGATCGAACATACCCAATGATCGGCCTGCTCTAGGCATTTCTTTAACAAAATCGAAT
GATATCTTGAGACCATTGCCTATTAAACGAAGGTATGCATTTGAGGCCTGCAAAATGAAA
CTCTGTGAAGTGGTCTAAAAAATAATTTAACAATAAAGAAAATAGTACATGAACTGAGTC
TGTGACATGAAGAACCAGGAACACATGTATGTTAGTATGACACTAAAATAATTTGTAGAG
AACTGAAAGGTTGCAATACACAATTAAGCAATCAAAAAGGTTATCGCAAGAGATAGCGTG
TACTAGTCTTCTCTATACTGAGAAAAATTGTACCATATTTGTTAACCGTGGAACTCCGAG
CAGTCTAGGTGTATTCCATCTAGAAAATTGGACGAAAGGGATTGGAAAGCCATAATAAGC
ACCATACTCATACGTCGAGTTATATGAAATGATCAAGTTGAAGTTGCCCTGATCAGAGCT
TAAGAAGTCGTATGCTGCAGACAGTGTAACTTAATGTCAGCGACTAGTAGAGTAGAAGAA
CTGATTCATGTACGCAATCTGAGGTGGAAATTTTTGACCTGCAGCAATTTCATTGCTCCT
GTTCGTGTAGCCACTATATAGGTCATCTCTGACGAGCCACGAACTGTCGCGCCAGAGCAT
TAACCCATCCGTGCAATCCACATCTATTCATGGTTTTAGCAAACATCAGGAATAACTAGA
ATGCACCCCAAATGGGCGAAATTGCCAGATGCCACGACAGGACGCTAATAATCCAATCAT
AGTTTGCTAATATCAAGAACAGCTAAAGCCATTGTTCGGTAAGTGGTACAACGTTTGACC
TTCGACGAGAAGATTTGTTTTTTTTTTACCTTGGGTCTCAGTTTCATTGCCGTTTACAAA
TGAGTACGAAAGCGTCAGGTTTGGAGTGCATTTGTTCTGAAGAAAGGAGTCCGGTAGAGG
ACTGCCCGAATACCAGAAATAGCCTGCCTGCAGTTTTCGACACGTCACGGAATTGCCTGA
ACATCAAGTAAGGATCATTAAGAACGCATGGCTCAGGAAACCGAAATTACCAGCACGAAA
TCGGCTAACGCGGTCATGTCGTCGGCCGACACGTTCACCGATGCGTCGTGAACCGGGATC
ATGTCATCCATCGCACCTGCGATGAGCAAAAATCATGTCAAGAAACCACTCACCACGTAA
CTCTGCAACCACACACACACACGGACAGAAAGAGAGTTGCGGTATACTTCCGACGAAGGA
CTGGTTGGCGCCGGTGACGAGGAACGTTGCGGCGCACGACCCCTGCGCCCCGCACGACGC
GCCGGGGGGACCGCCGCCGAACCGGCTCGTGGACGACGGCGGGATCTGCACCACGGGTGG
CCATTTGGGCGCGCGAGGCTGCGGGCAGTCCTCCGAGCACGCTGCGCCTCCAGTGGTGTT
CTCCGGCACGACGGCGTCGCTGCAGGAGCAGTCGAGAGGGGTGGTGTCTCCTTTGACTGC
GCGGTTGATGGCGATCTGCAGGCCTCCGACGCCCGCGCAGAGGATCAGCGGGAAGAGGAT
GAGGCAGCAGTTGGTCTTGCAGGCGCGCCTCTGCCGATTCGATTGAGTAATCAGAGGAGA
AAAAATATCCCAAAGAAAACATAGGACGAGTAGAATAAACACCGAGGCCTGCCCGCACGA
GTATGTTTGGGCGTCTCAACCCGCACGTTTGATGGCTGGGCCGGTCACCCGCATGACCTG
CCTTGTCACAGTGCTGCCTCCATGCAACACTAGTAAGTAGAAAATACTCCCTCGTTTCTA
AATATAAGTCTTTTTAAGATATTTCACTAAGAGTCTACATAGAAGCAAAATGAGTGAATC
TACACTNNNNNNNNTGTCTATATACATCTATATATAGTCCACAAATAAAACATCTTTAAA
GACTTATATTTAGGAACGGAGGGAGTACATGGTAACTGGCACACATGTGGACGAACTGAT
AAATGCTCACACATTAACCCCTTTCTATGTGGCACAAAAAATCTGTTAAAAAATGCCAAG
ATTCATACAATCACATGCCAAAAATTGTCAAGATTCGTGCAACCACAAACGGTTTTGCAA
ACGCCCACGCGTGTGGCCGTTATCTTTTTGAAATAAAAATAGGGTTGTGATGACGTCCAC
ACGTGTGGGCGTTAAGGGGTCTTGTCACACGTCTCGCGTGGTATCTAAGAAAATCAGCCC
ACACGCCTACGCATGGGCCCAACAGATAATGTCCGCACATCCGGCCTCGTGTCTCATGGT
CCCGCCCAGACGCCTACGTGTGGGCAAAACAGGTAACGCCCGCACGCCCGGTCTCCTACC
CCACAGCCCCGCACGCCTGCGTGACATTCAGCACACGCCCCTCACCCCCGAACCTGTTCG
GCCCCTCTTCCATGTTTGTTTAACTGCAGTTGTCATGGTTGCTGAACTGCAGATGTCATG
TCTGGACAACTACAGTTGCCATGGTTGTTTAGCTGTAGTCTCCATGTCTGAACAAACTGC
AGTTGTCATCTCAGATCAAGTGCAGTTGTCATTTATGGACAACTGCACCTGTTGCCATGT
ATGGCCTGGTCTACTGCAGGTGACATGATTTGAAAACTTTAGGAGTTGCCACCTACTAAC
ACTAGGCCGTTGCCATATAACACTTGAAAGACAAGGCCAAAATGATATCTTAGAGTTGCC
ATATGCTTCTAAGCACACTAGGCAGTTGCCACAGAAACACTACAAAAAAACATAGCAAAA
ATAACATATTTGGGTAAGAGAGAGTTGCCATCTGCTTACAAACACACTAGACGGTTATCA
TGTACCACTACAAAAAAAACATGGCAAGTGACAGTTTGGGGTGTGGGAGAGGAGATAGGT
GGCGATCGTGCGGGCATGTGAACGTGAAACAGGTGTGTGGGCGAACTAATAAACGCCCAC
ACACCAGCTCATTTGCGTGTATGAAAACAGGCATGTGGGTGAACTGATAAACATCCACAC
ACCAGCCACTCTACGTGCGTGAACGAACGTGTGGACTACCGGATGAAATGCCCACACACG
AGCCCAGTCCTACATGTCATAAAAAATCTGGTAAAACTTGCTAGGATTCGTGCAACCACA
AACGGACGACAATTCATGCATGTGGGTGATTTGCAAATGCCCACATGTGTGGATGTTATC
TTTTCGATAAAAAATGGTTTAAAGAAAAATTGAACTTATCCTTGTTAATAAGTGTAGAGA
GCATAACCTCACGCTAAAGTAGCAAGATAATGGATGAGGAGTCCCTTCCGGCCCCTCTTC
CCTTCCGTGGCGCCCCGCGGACGCCTCCGAGAGGCACCCCTAGATTACCTGTCTCCCCCT
CCCCTCCCCCGTCGCTGGCGACGGCGGGCCCCTTTGTCTCCTCGCTTGGGGGTGCGCGCG
CGGGCCGTCCCTCGCGGTCGGGATGCAACGCTGGTGGTCGGGGCGCAATAGCACATCGAT
GCTCCGCCACAGGCCGGCGACGGGGGTGTGGCGGTGGTGCGACATGTGGCTTGGTGGTCT
TGCAAACCAGCTCGCGATGATGACGATGATGGCTCCGTGCGTCTGGATCCGCCTCTAACG
CTGCGGGTCATAGATGGCTTGGGCCACGGGTGGCTTCTCTCGTCGTGGTGTGATGGTGTG
GGGGCGGGTGACCCCGTCCAGTCGGGCCCTTACGGCTGGACGGCAGCGCTCGGCGCGGGA
GGGCCTTCCTGGTGAGTTACCTCGGATGCGGTGGCAGGTCGATCTGGTCTCCCTCATAGG
TGGGCACACATTTGCGAATGGCCTCGGGGAGATCTGTGCCAGCTACATTGATGGGGCGAA
GCGAGGGTGCTCCTCCCCCTTTTCCTTGTGCTCGGCGGGGAGCTTGGTTGCGGCAGAAGG
TCGATCTGCTCTCCCTCGTTGGCGGGCGCATGTTTGCGGATGACCTCGCGGAGTGCTGTG
CCAGCTATCATGATGGAGCGACGCAAGGGTGCTCCTCGCCCTTTTCCTCGTGCTCGGCCG
GGAGCTCGGTTGGAGGGATGGTGGCCTCGACACGGCCGCGTCACCTGTCGTCGGCGCGGT
GTCGGTCCGGATTCATCCGCTCCCCTTTCTCCCTCATTCCTCGGCCACGGGTGGGTTGGC
GTAGCTCTACGAGCGGAGCGTTTGCGGGTGGCTTTGCCGGTCGAGGGTCGTTGGTTGATC
CAAAGGCACGACCTGTGTGTAGGTCTCGGGGATGTCTGTTTGTAGGGCGACGGCTCTAAC
GGTAGGAGGCATGGCGTTTGTGGGCGGTGCGTGCGTCTCAGGTGCGGGCGGTCAACCATG
GCCTCGTGGGTGACGTGGTTGCGGGTAGTTGACGGAGTTAGGGTACAATGATGGGGTGTG
AGTGTCGGGGGTACACCACTTGCCCTGTCCTTTGATTGGCCGACGGTGGCGGTGGCCGTT
GCCGCCGTACCCTTCCTGAAGGCTCCGTCGCGACGCTCCCCCTCATGTCGTCTTGCTCCG
GATGAAAACTTGATCTTTATGGATTGGACGGTGGCGGCTATCTTGGTCGTATCCTTTTTG
AAGGCATGGTTTTGTTGTTGTCTGACTCACTTCTCTCTTGTTGTCAATGGGGTGATGTGT
CGATGTCCGGTATTTTTGTATCTTGTCATAGATGTGTGTGTTATGTACGTTGTTTGGTCT
TTGGTTGTATTAGATGATAATTGATTTATAATATAAAACGAAAAAACCCTTTTTCGACAA
TAACCATAGAATTCTACAGTACAATCTGTAGTACTATAGATTCCCGGAATTCTACAGTAC
AATCTACAGTAGTGTAGATTCATGGAATCCTACGGGAGTTTAAAGAAAAAAATATGTTTT
TAAATGTATCCTTGTTTGTTCTTTTTTGAAACGTGTATCCTTGTTAACTGATAGAGCATC
TCCAGCCGCTCAGCCCCTCACGGACGTGAAATAGCGTCATCTGAGGACGCGCCGGCAAAA
AAATCGTCCCGGGGGCTCGGGATCCTAGTCACCCCCCCAAGGATGCCCGAAATGTTAAAA
AAAATTAAAGATGGCCCAAATTCGGCCAAAAACGAGCCAAATTCAGACGAAATTCAAAGT
TGCATTAAATTTTGTACAAAAACATAATTAAACATAAAACTAAACTAAAACTAGACTACA
CCGCCGTCGCTCGCCATTGCCGCCCGAAGCCGTCACCTTTTACATGCCGAGGAGCTTGTA
GAAGGTTGTGTAGTCGCCGTCGTTGTCATCGCCATCATCGCCGTCGTCATCGTTGTCGCT
CGCTCCGCCGCCGTCCTTGCTGCACCCCTGCCCAGGGTCGCCATGGCGAACGGGGTTCGA
AGGCCCCGCCTCCTCGTCGCCCTCGTCGAGGATGACGATGACGCCCTCCTTGCGGCCGCG
ACGACGGGTGGCGATCTCCTCCAGGGCGCGGCGCTGGCTCTCCATTTCCTCCCAGACGTA
GTCATCCCGCGCTCATTTTGAGGCGGCCTCGTCGTCGATGGCCATGGCGAGGTGCTCCTG
CTTAACGGGGAGGAGCCCCGGCTCTCTCTTCGGCTTGACGAGGCGGGAGGAAGCGTCGGG
CTCGTTGATGATGATGTCGGTGTTGTGCGTGCGCCGCCCCAACGGCGTCTCGTGTGGCTC
TGGCTTGACAGGGAGGAATGTCAGTGATCCGGAGGAGCGAGAGCGGGAGCCGGACGATGA
GGACGTCGCCGTCTCCATCCGCCTTGGCGTCTAGGAGCTACCGCGGCGGCGGGAGAAGGC
TGGCGACGTTGGATACTCAAACCTCGGGGTGTTGCCGCTCTCGATGTGCTCGAGGACGAC
CTCCAAGGTGCGGCCGGGGACGCCCCACCATTGGCGACACCCCTCGGAGTTGTGGTAGCT
GCGGGGCTCGACCCCGTTGGTGGTGGTGAGCTGGTCGGCGTGACGGTGATCGAAGTACGC
CGTCCACATCGCATTGTTGTCGGGAGCGTACCGTGGTAGATTGCGCGAGCTCTCCGGCAG
CCCCAACCGGATGCGCGATCTCCACCCGCCGTCAGCTTCATTAGGCGGTG