Map Locations of contig_67581 (9289 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_67581

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75304 1 2008 bp MLOC_75304.1 Available Available LOC_Os01g62600.1, FRAME:+1, EVALUE:0.0, 13101.m06707 protein laccase precursor protein, putative





CDS Structure of MLOC_75304






Contig Sequence (9289 bp)

>contig_67581 9289 assembly3_WGSMorex_rbca.fasta
AAGACTTAAAATAATATATTTGTGATGAGTTGGAAGAGAGAGAAGAGGAGAGAGAAAAGA
AGCGGGCTACAAACTAACAGCCGGCTGTAACACGTGCTCCTAGACACTTTGTGAGAGAGA
ATAGTGGGCCTTGTATCAATAAAGTAGTACTCATTTACATCTACCTATTGTACTTGCGAG
CTATAAACTTAACTATAGATGAGGTGTCAACATCATATAGCCAGCAGCTGGTTGTACTAT
TACCCATGCTGTGAGAGAAAAAAGAGCAACGGACGAGGAAATGGGCCAATGCCAGGTTTT
GCTATGGACGGACATGCACCAACTCGATCGGCCAACCACTACCACGGCTGTGACCTCCTA
CCATGCAGAGCACGAAGCGACCATGGCCCTATATAGACCCCGTACTCATTTCTCGGTAAG
TGCACCACTTCACTTGCTTCGAGGCGCAACCAAGCTAGCCACACAGATGGCTGCTCCTCG
TGGCCTCCGGCGACACGCCGCCGCCTCCGCATGCCCCCTCCTCCTCGCGTTCGCCGTCCT
CCTCGCACTACCGGGTCTCGCCGCCGGCGTCACCCGGCGCTACACGTTCAATGTACCCAC
GACGACTGCCACCTCTTTCATGACCGAACGAACGCGTGCATGCGTCGGTACTCTCCTTGA
CCGTTCGCGCTGTGGTGTCTTCAGGTGGGAATGACGAGCGTGACGCGTCTGTGCGGCACC
AAGAGCATCCCGACGGTGAACGGGCAGTTCCCGGGGCCGAGGCTGGACGCGCGGGAAGGC
GACCGCGTCGTGGTCACGGTCCACAACCGCATGAGCCGCAACGTCTCGTTCCACTGGTGA
GTGAGGAAGACGAAGAGCGGCATATATCGCATCGGTAGCAGCGGCTGCACGTACGCCCGT
GCGGCGACTCCTGTATGCATACATATGATGATGATGGTGGGTGCGTGTGCAGGCACGGGA
TCCGGCAGCTGCGCAACGGGTGGGCGGACGGGCCGGCGTACATCACGCAGTGCCCGGTCC
AGCCGGGGCAGAGCTACGTCTACGACTTCACCGTCACCGGGCAGCGCGGCACGCTGTGGT
GGCACGCGCACCTCTCCTGGCTCCGCGTGCACCTCTACGGGCCCCTCCTCATCCTCCCCG
AGCTCGGCGTGCCCTACCCCTTCGCCGCCCCCTACAAGGAGGTGCCCATCTTGTTCGGTA
CGTGCGTGTTTTTTTCGGCATCGTACTTTTTTTTTTTTTTTTTTTTTGAGGGGATGCTTA
CTTGCAGCTCATTTGAATGGGGATCTTGGCAGGCGAGTGGTTCAAGGCCGATACTGAGTC
AGTGATCAGCCAGGCCCTTCAGACTGGCGCTGGCCCAAATGTCTCCGACGCCTACACTTT
CAATGGGCTTCCCGGCCCAACTTATAATTGTTCGTCGTCCAAAGGTACTTTTACTTACTT
TCTCTCTCCTAAGTAAGTTATCGACATGGCAGGCTGCAAGCCCACGAGTTAATGAAGCAA
TTGTCTACTTATTCTCTGATGAAAATGGAAATGCATGCAACTGAACGAAATGCACGTGCC
AGACACGTACACGCTGAAGGTGCGGCCCGGGAGGACGTACATGCTCCGGCTCATCAACTC
GGCGCTCAACGACGAGCTCTTCTTCGGCATTGCCAACCACACGCTCACCGTCGTCGAGGC
GGACGCCAACTACATCAAGCCCTTCACCGTCACCACGCTCGTCATCTCGCCGGGGCAAAC
CATGAACGTGCTACTCACCACGTCCGCGAGCCCCTCCTCCCAGTCCCAGTCGTTCGCCAT
GGCGATCGCGCCCTACACCAACACCCAGGGCACGTTCGACAACACCACCGCCGCCGCCGT
CCTCCAGTACGACGCCCCGACGCCGCCGAGCTCCACCCAGAACCTCCCCCTGCCGGCTCT
GCCGCGGTACAACGACACCAGCGCCGTGGCCAGCTTCACGAGCAACTTCCGGAGCCTCGC
CAGCGCGCAGTACCCGGCGCGCGTGCCGCAGGCGGTGGACCGGCGCGTCCTGTTCACCGT
CGGCCTCGGCACCGACCCCTGCCCGTCCAACCAGACCTGCCAGGGCCCCAACGGCACCAA
GTTCGCCGCGTCCATCAACAACAACTCCTTCGTCCGGCCCAGGAGCGCCCTCCTCGAGGC
GCACTACCAGCGCCGCTACGCCGGCGTGCTCATGGCCAACTTCCCGACCACGCCGCCGCA
CCCGTTCAACTACACCGGCGCCCCGCCCAACAACACGTTCGTCGCGCACGGCACGAGGGT
GGTGCCGGTCAAGTTCAACACCTCGGTGGAACTGGTGATGCAGGGCACCGCCATCCAGGG
CGCCGAGAGCCACCCCCTGCACATGCACGGCTTCAACTTCTTCGTGGTAGGCCAAGGGTT
CGGCAACTACGACCCCATCAACGATCCGGCCAAGTACAACCTCGTCGACCCCGTCGAACG
GAACACCGTCAGCGTGCCCACCGCCGGCTGGGTCGCCGTGCGGTTCCTCGCCGACAACCC
AGGTAATCTTTTATTCGACACTTATTGGCAAGATTGACTTGCCTGTACCCCTTGTTTACT
CGGCAGCGACCATTGTTGACTAATTCGATGTGCATTCATCGTTATGTGCGACAGGTGTGT
GGCTTATGCACTGCCACTTCGACGTCCACTTGAGCTGGGGCCTGTCCATGGCATGGATGG
TCGACGACGGGCCGCTGCCCAATCAAAAGATGTTGCCTCCGCCGTCCGATCTTCCGAAAT
GCTGATGGCTCGTACAAGCGGCGGAGATCTGCGAATGATTTCTTGCCTGCCCACCGCATT
TCTCTCTTCATGTTCGACGTACCAACTACCAACTCCTTGATCAGGACTGTTTTATTTGTA
CTGATGTGCTGATCTTCTGGGAAGTCATCGGACTTTGTTTCCACGCACTTGAATTCCCAT
TTTGAATCTGAATAAAATGTCACAAACTGTGTTTCTTCTTCTTCTTGTTTCCTGAACATG
TATGATACTAGATCCGTAATGCATTGTATCATATGATAGTTTATTTATTGTCATGTATTA
TATAGTAGCATAAAACATGATATTATGATATGACACTCAACTTTTTGTCATTTAATTATA
TGTCACCTCATCAAAATTGCCTAATTGACACGCATGATACTCTTTTTAGTATTTTCGTTA
CGAGTAGTCTTATAGTTTGGTCTCGTTTACATACGCAATTGTTGAATTGTTATATCAAGA
TTTTTTTAGGCATTTTACTTCAAGATTTGTACCCCCTTACATGGTTCTCATTTGTCTTAG
TAGCCGTTGGATGGGCTTTTCATGGGACCAGTGGCGTTTCTACCGTACCTTCAGTTGTCT
TTGTGTTATTGGGCCTTTGTTTTAGGGTTTCGATATTCATCACACGTGTGGTGGAAAGGG
GTTTAAACCGAACGACCTTATTATCGTAGGTCACGCTATGGCATCACGTGCATTCACAAA
TGATGAAATTAATGATGTTAGCGAGAAAATTTTGGGTTTAACCTTTTCAAATATTTGATC
TTTTAAATGAAAAATATAATTAAAAAATGTTTCCACCGTTAAATCAGTTGCAACAAGATC
TTCAAAACTATATCTCGTATCAATATGTTTCCATGGCTTCTTTTTCTAATTAAAATTAGC
CATATCTATAGCACATAAATTGCCATGGCGTTTACGATGAAGTTGTCATGATATGTTTTA
ACTACTTTTTTTGCAATGTTGAAAGTAGTTTTGAAATGTTTAAAAAAGGGGAATTAAGAA
ACTAAACTTGCCAGTGTGAATTACTAAAATTTGCCATGATCCCTGAAATAATTTTGATAT
AATTCACATTTAAAAGGAAATCCATTGTCAATTACTTTAAAAATGCATGATCAATGAGTC
AAAATTTCCATGAATCATAAACTAAAATTGTCATGGTGAATTAATCAAAATTGCCATGAT
ACAAGCACTAAAATTTGCCATGGTTCATATAAAAAATATTTTCCATGAAAAATAGAATAG
AATTGCCATCGTAAAAAATAGTAAAATTGTCATTATCTATAAACTAAAAATGTCATGATT
TGTAAATTAATTTTTCCATAATGTATTGCTAAAAACTTTCATGATCCATGTATTAATTTG
TCGTGTTTAGTTACTAAAATTTGCCATGGTTAGAATTCGCTGTCAAAAGTACTCTATGGC
AACATATCATGGCAGCTCTAAATCTAGAAAAAAAATGAAACATATCATGGTAATTTTTGT
GTAAACTCTATGACAACTTCAATCTACTCCCTCTGTTCCTAAATATTTGTTGTTGGGGAG
AACTAGTCTAGTTCTCTCCAACAACAAATATTGTGGTACAAAGGGAGTAAATATTTTGGC
AACTTGATAATAAAAAAATCATCAAAACATATCAATATGTTATCTAGTTTTGAAGATCTC
TCCGAGACAAATGTAATGATGAAAACGGGATCTTAATGAGTTTTTTTTATTTAAGAGATA
AAATATTTTTAATTCCGAAAAAACAAAAAGCTTTCACTAATCTCACCTGTATGATGTGAC
AAGATGGATGGTGTTGAATCGTTTGAACAATGTAGTTTCATGCTAAACGTGTAATATTTA
TTATTTGTTTTTGCTCAGATCAGCAGCGTTTTTTCTGCAGCTTTGGCCTTTTGGGTCGTT
TTGCTTTCTCTGTAACACAACTTTATTTCTTATCGATCCTCAAAAAACTTTATTTTTATC
ATCTTGCTTTTTCTGTAACACAACTCCATTTCTTGGAGGGAGCCCCATCCGACGTTGAAC
TTAGCTAACTAAGCACGAGATGCTCAACGCAATTACCCCTTTGGCATATAGCCATATAGG
TGTAGGCTCGAACTTTGCCTTCTAGCAAATCGATCTGTGGTTGGATGGTTAGAAGGATTA
TAGTATTTTCAGCCCATCAGGATTCAAGTCCTCGTATTCGCATTTTTTAAAATTTATTTT
TGAATTTTCGATGATGCGTATTTAATGGAAGGGGTCGTTTTCGTCAAAGATGCGGCGTCT
ATGATGATTTTTTAAATTTCAATATAATATGCTGATTCAGTCTATTAAAAATGCTCATAG
AGGTGAAATATACGTATGTGCATTCATTATATGTGTGTATATAAACGCTTGCGTCCGTAC
GTACCTTGTTTAAAAAAAAAATGTCCTAGGTGATCGTTGGTGCACATGCCGTGTTCACTT
TCGTGAGCCTTAAACCACACACACGCGCGGGTGGTAATGTGGTGGCAGACAAAGATTCGC
AGGCTCGCAGCCCGTCACCTTTTCCTCTATTTCGAAGATCATTGGCTCCGCCCGCGCGAT
CGTGCACGTACGTGGAACTGTTTCGTACGGGCGTCACTGTCCCCAGGAACAGTTCTCGCA
GACACACGCTACTGCCGAGGAACACCGCCGCACATCATCGCTGGCCATAATTTCCCGGCA
GCTGCCGAAGCGATTCCTGCTAGCCACGCCCATGTCGACGTACGTGCACGCTGTCACGCA
TCAACTATGGATGGTGGGCCGTGGAGACGATAATGCATGCTTGCACGAGAGGCGTCACTG
CTGCATGTGTTGAACGGATGCGTCGTGCGTGCGTGCGTGCGTATGTATGCGTGCCGGTAT
TATCGTCTCCATGCATTCTCTGGCGCCATCTTTTCGCGCCCGCGCACGCACGCACGCACG
CACGTACCGTCCACCGACTATTGCCACTACTGGTGGCCTGTCGCCTTTGCCATATCGGTG
GCCTGGCGCGGGGCAAGAAAAGTCCGTGGCGCGTGAAGCGGTGCATAGTCCGTCCGTATG
GGCACGCAGGCAGCAGTTTGATCAGGCGAGCTCAGCAGGCGGAGCCACTCAGAGACAGGC
GCGTACGTCCGTGCAAGCACTGGTCAAAGCTAGCGCGAAGCAGCATGCCTGACCGATGTC
CATCACTTGGACCCGTTGCGATACGCCTGCCCGCACGCCATGGCCGGTGCTGTGCAGTGC
CAGCTCCGTTCCCTCGAGCCTCATGGCGGTGCAGACTCATCTTTGACCGTCCCGCTCACC
CACGCCGCGACCACGGGCCGCGGCCGGCATCATATCCGTTTCGCGTTTCGGCCCAATCTA
CCTTTAATCATTGTGTTCTTCGGCCACCCCACGGTGCTGACGGAAGAAACGACCGGGGCG
ACCGGGAGCTACTAGCTTAGCCCAAACTCACTCACATGGCGGACAGTGCCATGTCGAGTC
ACGCGCACCTAGCTAGGAGTTGGAGTGGAGTGGTCTCTTGTAATCTCCTCCTTCGAATGA
CCGGTGATGCGACTAGCACTGGCGCCGCGATGTGGAGTCGCAGTTGGGTCGGGGCAAGCA
AAAGCGGGTGTCGAAGCCGATCGTGGTCCGTGGACCGTAGACGCACATGCAGATGCAGCA
GGCGCGCGACGTCGAGAACGATCCGTCTCGTCTCCGTCTCTCCGATGAGGATGTCTTTCT
AGTGCGTCATGGCAGCAGTCGGCGCTGGCCGGGCTGCATGAGGCAGTGGTACGCTGTTGT
ATTTGACCGGGCCATGCAGGTGCAGTGCATGGCGTGGCGCGCGGGAGGAAGAGAGGGGAG
GGCCCATGCATCCGGGGCAGCAAGCGCCGGGCGGGGTGGCCAACCGACCGACCGCCCGTC
CGTCGCCACCTTCCCGAGGCGGAGGACGCGCGAGAGAGGGACTGAATTCCGTCGGTGCCG
TGCGTCGTGCTGTGGCCGAGCGAGCTGCTGAGCCCCCACCGCGCCCCCGGTCCACCGCCG
CGCGCGTCAGTCCGCTCCGCCCCGGCAGCTACAGCCTAAACCTGACGCCGCTGCTGACTC
CTCACGTACGTACACACACACGCAACCCGCCCGGCGAAAACCCCATGCCACTTGCCCGCC
CCACCGTGCCCCGGCCTGCCCCCTCCCATTTCCTCCGTACGCGTACCACCTCTACTATAT
CTATGTCTAGCCCCCGCTCCTTTTAGAGCAATTTCAATCGGATGGCTCGTTTCCCAGTCA
CCGTCTGTTTGCAAAATCGATGATCCAGTGCGTGTATTTATTTTTAGAACACGTCGCTTC
GCGTTCGCGTAGACCCACCCAAATTAAGGATATAAATGCGTCGGCACGGACGCGAACAAA
TACGCCGCACGTGCTCTCGGTTCCCGCCGCGACCACACATGACGGCCGGCTAACTATCGC
TCGCGTCTTTATTAATGATGATCGAAGACCACGGGCCCACGCGTCAGCGATCACGGACGT
CCTTTAATAATCCCAGCGTAAGGCGGGCGTCCTCGTCCGCTTCCCAAAGCCATCCCCATC
AAGCCACCCACTATGCTCCCCCGTGGATGACAAACCCTAGCCATCATGGGGTTCTTCTCA
GGCGTAGGTTCAAGCTCGGGCAAGAACGATGTGGTAGAACGATGAGCTCCTTTCTCTTGT
GCTTCAAAAGATAGTCTTCTCAACACCCAATCACTCTCTCACAGGTTTGACAAGGGTAGG
AGAGATTGATTCGGTGGAAAGCAACTTGCGGAGGCTAGAGATCAAGTTTCAAATGGATGG
AGTGTAATTTGTTCATCTTAACACGTGAGTAGGTGGCTCTCTCTCCGGAAAATGGATATG
GCAAGTGTGTATGTGTGTTTTCGGTGCTTTCTCTGTGAATGAGAAGTGGAGGAGGGGTAT
ATATAAGCATCTCCCAAAATCCAACCGTTACAAAATTATAGCCCAACTCGATGACACCGA
AATGAATTTGGGTGATACCGAGTTGCACTAAATGTGGTGACTTTTTAATTCTCGATGATA
CCGATATATGAATATCGGTGGTACCGATACGATGACCTAGGGCAGTTTCCAGATCTCGCT
GGTACCGATTCCAAACTCGGAAATTCTGATTCTTGAAATAGAGATATCAGAAAGTTGGTC
GTTGTCTTTCGGTGGTACCTGTATGAGAGTTAGTGGTACCAAAAGATTAGGGTTTGGCAC
AGAATCTGTCATTGGGAAATTCGGTAGGGACGAATAGAAAAACTTGGTGGCACCGATTTT
GTTGTGTAGGCTTGGGATAGAGATTTTGTGAGAGAAATGATGAGTATTTTTGTGGCTATC
TCTAAGCACTTGAGAAACCAACTCATCTAAATACCTCACCCCCTTTTAATAGTATTGGCT
TTCGTATGGACTCACAAGTTATTTATCAAAAATATAAAATGTAGAGTCCTCTTNNNNNNN
NNNTGAGCCAATCCTATTCATTTCCTTGCATTAAGGGGTTTCTCCTCACAATCCTTTAGC
CAATGCATCTTTGAATCTTTCTGAAATATGCTTGGATAAGATCATTAGTTCAAAGATACA
TATGTTGTTATTAATTAACAAAATCATCTTAGGGAGCAATTATGCTTTCACGGCCCAAGC
CCGCATACGCAGCAGACTCTCCCGATTGGGAGGTCTATTTTGTGTTTGAGCATGAGGAGC
AGCATCGGCACGGGATCCGTGACATGTGGGGTTGTATGTGCATCTAGTGCCATCCTTTGT
TGGTTTTAAAGTATTGAAGACAAACATGTTTAAGAGACTAATGTGTTTGTGAGAGTTCAC
ACGCCAAACCAGATAGAAATCTTTGGAGATTTGGTTTAACCGTCGAAGACGACGCCCAAA
AATGTCCAAAGACATTGATGATGGTTGAAGTCATGGTTGGTGCACGAAGATAATTGCTTC
AAGATATTGAAACGTGAAGTGGAGTCTTTTGTTTGTTTTGTTTCTTCTTGCTTGAATCAT
AGGAACCACCGTACTGTGAAGTGGGGTCAACATGATCGATGTGAGACGCTAACGTAATGC
TCAACCCATAATTACCTATGTATTCGAGCTAAGACAATGATAGGAAATCTCTTCCAAAGT
TTGTTGAGTCGGCACTGCTTTGTAGCCGAGGTAATGTTGTCGCGTTTATCTTTGAAATCC
GGGCATTGGAACACGTGTCGGTTGGCCATTGTCCTAGGGTCATTTTGGTCATATCATGTA
GGATTGCGTGCTAGCTATAAATAGCACACCCCCTCCATCATAAGTTGGTGGCTGCTCAGA
GTTAGATACGATGTTGTTGGTTTGGAGGAACCCACCTCGAATACATTGAGAGAGAGAGAA
CTAACCTGCAAGGATAAAACAAAACTCCTAGAGTGAGAGTGTTTGAGCATTACTCAAGTC
ATTCTATTCTCATAGAACTGGAGAATGATGACCCATGGGTATAGAGGATCAATCGTAGTC
CTTTTGATANNNNNGAGTGTCGAATCCAACGAGGAGCACAAGGAAATGA