morexGenes - Barley RNA-seq Database

Contig contig_67544
Source Contig contig_67544
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_67544 (8080 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_67544

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75285	1	1840 bp	MLOC_75285.1	Available	Available	LOC_Os06g34120.1, FRAME:+1, EVALUE:0.0, 13106.m03525 protein GDSL-like lipase/acylhydrolase, putative, expressed
CDS Structure of MLOC_75285

Contig Sequence (8080 bp)

>contig_67544 8080 assembly3_WGSMorex_rbca.fasta
CATAAACATGCATATTTCTTGTAGTGCGACTTGGGGGTGGGTGATGAAAAACTTTACATC
CCAATGGGATGTGGGTTTGCAACCTCGATGGTCATTCTGGAATCTGGCGTGTCGGGCTTA
AGATCCGGAATATCGACCGGACATTGCCGTAAGGAATCTAGGTTATGTGCCGAATCGAGG
TTCTCCCCCTAACTTTTTCTAGATTCCGGATTGGAGGGGCGATCCCGATGCTCGTGAACC
GGAACGTAAACCATTCTTAGTTCGGGCTGTTGGGAGGGAAAACCTTCGGTCGGGCCTTCG
ATGGTGGCGGCCAAGTGTGTAATTGGTCGGACATAAATTGCCCTGTCGCCGGGTTTGAGC
CCGATCCGATCATAAACCGAAGATTGCCCATCATTTACCCCTATGGCTTGGATCCGGCCG
ACTAACTCGTTTAATGACGAGATGTCTGTGGAGTCCATGCTTTTGGAGTGCGCAGGGTCA
ATCCGCGGTATCGTTGTTCCCGGGGCGTTTGAATCTGTGCCGAGGCTGTCTTTGGCCAAA
GATGATCCGAGTGTATCGACGGGTCCGGGCCCTAAGGCCATATTCAGGGCGGATCTCGCC
CGAGCGGCGTAATCCACCACCCCCATCATTAGAGCGATGGGACTCGCGAGCTCTTCGAGG
GGATTGAAAGCATCGTCGGAATAAGATCTTCTCGGGAGTTAGTGACGAACTCTAGGTTCC
CAAACCTGATCTCCTGACCATGGATGAGGTTTCCGACCTGGCCAAGGTAGCCGGTTAGAT
CAGCGTGGAACATGATGCTGCCGAACACAAATAACTGTCCAGGGACGAAGACGTCCCTGT
TGCAGATGTCACTGTTGATGATTAGGCGAGGCATCGATCCTTTGGCTATCCCACATCCGA
ACTCTCAATGAAAGCACCAATGTCGGTGTCAAAACCGGCAAATCTCGGGTAAGGGGTTAC
GAGGTGTGGATCTTGGATCGATGGTAACAGGAATAGGGGAAACGATGTTTACCCAAGTTC
GGGCCCTCTCGATGAAGGTAAAACCCTACGTCCTGCTCTTGTTTATGTTGATGACGGAGT
ATCAAGTACAGAGTTGATCTACCTCGAGATCATATGTTGAGGTCTAAAACCCTAGGGTAA
TGATATCATGTACGAACTAAAATCCTCCGGTTTATATAGACACCACGGGTACATAGGGTT
ACATCAGGTCGGTTACATCCGTAAATAACACATGCCAATATTATCATCTTGACTTGAAGC
ACACACCAAGCCTTCAGAAGTTTTCGTCTTGAACACAATGTCATCTTGTAGTTCGGTCTT
TTAATGATAGTCACACATCAGTCCATGAGTCCGGCCCGTAGAGATAGGTCGGCGGTCCGA
GGACCCCTTTGTTCCGTACTTCCTCGAAAGAGAGCTCGGGGTGTCGCTGCTAGATCTAGT
TCGGCTAGGGAGAGACGGGCAACCCACCTCTCTTGGATGGGGTTGCCGTCGGCGATGAAT
GGAGTGGGTGGGGCGCGATGAGACGACATCATTGCCATTGCGGAAAACGAACGGACGGTG
AGGTGAGAGAGAGGGAGTGGGTATGAACTGAAAAGAAAGGTGACGGAAGGAACGTGGGGA
GTTACGAGACGTTGCGTCGTCTCCCTCGCTTCATCAAGCATGCAGGCGCTCGCCATACAT
GGCTCAAGAGACCGAGGCCTGCTTTACGGTTCGTATGTGCCACAAGTTGTATGTGAGCCA
GTTAATCAAACAGACCAAATTCTACCCGCGTGAATCTGATCATACCTAATGCAGCCTATC
AAACTCGTGCCGAAGTATTTTGCGCTCTTTCTTTCCGTCCCAAACGCAAAAGCCATGGTC
GCATGTGTGAAGTGGAGTGGAGCGTGGCCACTCGCCACTCCATGGGTAGGAGTAGGATAC
ACTTGCAGACCAACTCAAACAGTTATGGCTCAACAACCGCGCGCAGCGCCCTTTTCCTTT
ATTCAGTGGCTGCCATTGTGCTCGTCCGGATGAGATGGAGATGAGCTGTGGCCCGTGGGA
GCAGCAGGGGCAGGCAAACCATGGCCATGGGGCCAAATGCTGGACGCATAGAGTTGGGGC
AAGGCAACTTTTGTTGACTCTGATTGAATGCCCTTTGCAAGCTTTCTACTCCTACGCCGG
ATGATTAGTTTTTTGTTTCTCAGTCATGTCATGCACTCCGGTGGTCAGGTACGTGAAAAT
GAAACCCTGGTTGGGAAGGGAGTTGAGTGAAAACATTCGTCTGTTACTCGTAGCGACGTC
ATGCTGACGCTGGCAAATCCGTCTCGGATGCATGTGCCGACTTGCTCTGATAGATCACTC
GCTCGCTCAGTCGGTCGGTGAGACATGGGTGCTGAGTGCTGACCTGGTTGGACCAAAGTG
CCGTTGGCGTCACGGCGAGGATGGAGTGTCATAAGCCAACTATAATCGTCATCAAGAAAC
TAATGAGGCCCGCAGTGCTGAGAGCTGGACGGCCTGGATCCGGTCCAAGCCGATCAGACG
GCAGGAGCCGCGATTGAGTCAGGAATCTACTGCACACACACAGACAGACACACACACTGG
ACAGTGGACACAGGGGGCGAAGACAAGGCTTGCGCGATTCAGGGAAACCACGAGGGCGCC
GACTCGAAAGACAATTTAATGGGCGGTTGAACAAGAAACGGGCGCCCAAGGGAAGCTGGA
AGTTATTACCAAGACGACGACATGGATCGGTCGGTGCTGCCATCAAAGATGGAGCGAATA
AAAAAGACGACATGGGTCCGAGCCGGAGCTCCGTTTTCGCCCGAACGTGATGAGGAGGCG
TCCCCTTGTGTCTTGACTCTTGTGAGCCTTGAGCCCTGGACGACTGGGTGCACCTGGCTC
CGCGCAGATCCAGTTAATAATGGTGGTGGAATGGTGGAGGATCACATCCGCAGGGAGAGA
AGGAAAGCGCGGCGGCATCTCATTATGGCCTGTGAACCTATGATCGACGCGAGGAATGGG
AAATACCGGGTCCCGGGCTGCACGGGGAGAGTTACTTATTAGAAATATAGTGGAGTTACT
TTGGTTGGTATAGTAGGAGTACCCAGTACTCGTCTTTACGGTGGTAGTATGTACTAGCCC
AAGTAAACAAAGTCCACTCTTCAGCAGTCCATACCTACACTACAATCGTGTCTGTTCACC
TCAGGCTGGCAAGTAGGAGTAGGAGTAATTCATGGCGCGGAACTTGATCATGCACATTTT
GCATGAGAGACGAGGCCTGCACTGCCCATTGAAGAACAGGATTTGGCGCGTTTTTTTCGG
TTGTGGTACTGCATGGCGCGGTTATGGTTAAATCGGTTGGACCGCGCGAGAGCGAGCATC
ATCCGGTGGTCATGCCGAACAGTGCCGCCCGCGCGCGACAGGCCAGCGGCAGCGGCAGCG
GCACACACTTCACTTCACCTCACCTCACTCCCGCAGTGACACCACTCAGCAGCAGTTATA
AAGGAGCAGGCGCCACACAAGTAAAGGATCCCATCTTTCTCTCTCCCCCTCCCGCAGCAG
CACATGCGCGTCGCCCGCCGACACCCACACCCACACCCAGAGCATCCACAGCAGCAGCAG
CAATGGAGCGTCGGGGCTTGCTTGTCGTCCTCGTCGCCGCGCTGTGCCTCTCGGGCGGCG
CCGACGCCAGGCACGCCAAGAAGTCGTACCAGGCCGTCTTCAGCTTCGGGGACTCGCTCT
CCGACGCCGGCAACCTCATCGTTGACGGCATCCCCAAGTCGCTCACCACCGCGCGGGCTC
CCTACGGCATGACCTTCTTCGGCCGCCCCACCGGCCGCTGCTCCAACGGCCGCGTCGTCG
TCGACTTCCTCGGTATGTAGTCTACCATTCTCTTCCCTCCTCTCCTCTCCTCTCCTCTCC
TCTCTCGCCGCCAGCGAATCCCGCATTCCCGCGCTTCCTTTCCCTCACCTCTTGGTCTTT
TGGTGCGGTGGAGCTTATTTTATGGGCTTTGCGATATCCCATGGATACGTCTCTCTCTGT
TTGACCATGCTCTGACCTTGGTCATGATGGAATTGACTCTTGTTTAGTGTGCTGCTCCTA
CTCAACCAGTGTCTCATCTTTAGTGTGCTACTCCTACTCAACCAGCTAGTGTGTGTGTTC
AAATTTTTTCTCGTGATGCAAGGCTAATCAGGTAGTACTAGAAAAAAGGCCTCCCAAGTT
CTCCTTTCAGGAAAGAAGATGGAATCAAGTGGTAAAATAAGCTGGTAAAAAGAGCTGCTG
CTTTGCAACAGTGAAAATTATTGCTGCCTCCATTCTGCCAGAGCAAAGTATTGATTCGAA
TTAAAGCTCCTTTTTCTTTTCCTCTGTAAAGATATAAAGCAGACCGGATTTATTTTTTAC
TGAAAGGACTGGTGATTTACTGCTGCGACCGATTGACTCATACGCCATTGCATTTACGTG
TAAAATTTCCTTTTTATTGATGGGAATCTTTTGTTAATTTGCAGCCGAGCATTTCGGCCT
GCCGCTGCCGCCGGCGTCGCAGGCGCATGGCATGGACTTCAAGAAAGGGGCCAACTTCGC
CATCACCGGCGCCACGGCGCTGGAGTACTCCTTCTTCAAGGCCCATGGCATCGACCAGCG
TATCTGGAACACCGGCTCCATCAACACCCAGATCGGCTGGCTCCAGAAGATGAAGCCGTC
GCTCTGCAAATCGGAGAAAGGTCCGGCACCGATCCTCTTAAACTCTCTTCAAATGTGGAA
CCATCTACCATGTCCATGTTCCTCCCACCAGGAGATCTCAAGTTCAGAATTTCATTTTCT
TGTGCTGACTGCAGAGTGCAAGGACTACTTCAGCAAGTCCCTGTTTGTGGTGGGAGAGTT
TGGGGGGAACGACTACAATGCTCCTCTGTTCTCCGGCGTCGCCTTCTCCGACGTGAAGAC
CTACGTGCCGCTGGTCGCCAAGGCCATCGCCAACGGCGTCGAGGTATGAAATCCATGCAG
GTCGCATCGCATTGCATCATATAGCAACCGTAGAAAATCCTACGGAATGCACACACATGG
CAAAAAGTAGAAAAGCAGCGCAAGTGTGCGATGTACTTGGAGATTCAGGGAATCATGCGA
GTGTGTGATGGGTGCAAATTTCGGGCAAACACACATCTGTCACACCTAGATGTTTGCTGG
CAAGGTGGAATGCATGACAAACGCATGAGCGGCTGCGAGAAACCCGGTGCGTGGAGATGA
TCAAGGAAGTGTTCAGTAAGGAGACCGAGCAATTTAGTTCAGTTCTTTTCCCCGGGGAGT
AGTTTAGTTAGTACGAGTGTCAAAAAAATGTCTTACATTTTGATACAGAGGAAGTAGTAG
TACTTAGGATGCAGGCAGTAGAATAATGTCAGTACCTAAGCTCATGAGAGCTTAATCATG
CGGGGTGGCTGCATTGCGGTGTGGTGGTAGGCGAGGGATAGGGCTAGCGCACATTTGATT
GGATTGGATCTAGGGATCTCAGTATGATGGTTTCTGATAGTCACTAGGTTACCAACATTT
GCAGACATTAAAATAGGGGCGTGGACATGTGACACATTTGGTATCTTTCTCATAATAGAG
AATCTTCTGACTAGGCGATGAACATGAAATTGCAATTGTTATACTGGTATGAAAAGTTTT
TTTTTCCCTTTCGCCTGCATAAATCACACCAGATATTCGAGGTGCCATGGGGTCTGTCTG
TACTTTGGTCCCCAAATAGAGTTGCTCCACAGTACATCACATTGTTGCTTAGCGTAGTGG
GCCATGTGATGTCTGGATGGCGAATTCGTGTCAAACTGACATGATTGCACAATGAAGAGA
ATGGGCATGGAAAAAGTATGTATGGCTGGTAAAGAAGATGGGGAATCATCTGTTACTATG
TGCACCGCCATCATGAAACGGCTGTCACATGACATATGAACTCTAATTTTTCTAACCACA
TGTCCCATGCGGTGGCTGTCACATGACATGACACTAGAAAAATGGTTAGTCCCATACACT
TCAGTGGGAGTGAACTGATCTTTAAAAATTGTACTAGTACTGTCAGTGTTGCATTACTGC
TACTACTTTATTAGTTGTTCTCTGCTAAGCTAGCTTGTCAGTATAATACAACGGTTTCAA
ACGGTTGTGCCGTTTGGAATTTATACTTGGGATGCAAACTGAAACGTGCATCAACACATG
GGAATTTTGATAGTCTTGCGCTCATTTTTTTTCTTCCTTTCAGAAATTGATCGAGCTTGG
CGCGACCGACCTGTTGGTGCCTGGAATTCTTCCGATCGGGTGCTTCCCATTGTACCTGAC
TCTCTACAACAGCAGCAAGAAGTCTGACTACAACGCGCGCACCGGGTGCCTCCGAAGATA
CAACCGTCTGGCCTTCCATCACAACAGAGAGCTCAAGCAGCAGCTTGACCAGCTTCAGAA
GAAGTACCCAAAGACCAAAATCATGTATGGCGATTACTTCAAAGCTGCAATGCAGTTTGT
CGTCAGCCCTGGAAAATTCGGTATGTGAAGATGGATCCAAAGTCGTACGCAACATATTTA
CTCATCATAGGATCGCCATAAGACATGGTGTGTGCATTGCGAAGTACCATTGTGGCATGG
TCTAACTGAAGAACTTGACGGCCGTTGCAGGTTTCAGCACGGCATTGCAAGCGTGCTGCG
GCGCCGGAGGGTCGGGCGCCTACAACTTCAACCTGAAGAAGAAGTGCGGCGAGGCAGGCG
CGAGCGTGTGCTCGAACCCGTCGGCGTACGTGAGCTGGGACGGCATCCACATGACCGAGG
CCGCCTACCGCATGGTCGCCAACGGCTGGCTGAATGGCCCCTACGCTTCTCCACCGATCA
TGAAGTGAGAATCGAGATGGCTAGCCAACGTTGTTGTTCTTGTTGGTGGTGGTGGTGCTG
CTGCTGATGGAGGGGGATGGACATGCAGAGCGCTTCAGGCACTGAAGTATTAAGTTATGA
TGAGTAAAAATGATTAGTCTGTTCGTTGAGAGGCTGTATAAACCGTGCCGGTATAGATAT
GTTTTCCCAGCTGAAAAGCTCTAGTAGTACAGATGTACGTACCTTGTATGGCATGCTACC
TGATTCTTATTCATTTGCCAAGACCTTGCATAAGAATACATTAAATATTATGGAGACAAG
AGGATCAGAATTATTCCTTCATTTATTTATTTTAAAAAAAAATGAGGATTCCCTTTGGCC
TCTCCACTAATACGATGCATGCATCTATTTTATTAAAGAAAAGCAATCAAATAGTCCATG
GTTCCCAACAAGCTCTAAAGGAGCAGCAAAATAATCCAAAATAAATATCTAGATGTGTAA
CCATCTATCCTATTATTGGACTGCTATGCAAATCGGTTGTAAAATCCTGAGCAATCATCT
CTCATCGGATAGACCGAGTAACCAAAGCCTCCCTGGTTTCACATGAGTGTGTAACAGATC
AACGCCGATGTCCTGTAAAGTACCTGAAAAAAAATTATATGTGTTTGTGTGTTAAAAGTC
ATGTCATTCCTGTAGTTGCATATAGCCTAAATCAATGCACATACTCCTATATGAATATGT
CTAGCAATAATTATGTCTACTCCATTTAGCCACGTCCCAAACAATGTTTCAATGCTATCG
GGAGGTATGATATTAAAGGCTATACGAACTGTTTCTCATAATATTTTTGCTAGCGGACAT
TGGAGAAAAAAGTGTTTAATAGTTTCATCATGGTCACAAAAGCTACATCGTTTACTTGCC
TCCCAATTGCGTTTTGTCAAATTATCCTTAGTAAGAATCACCTCCTTGTGAACAAACCAC
ATGAAGACTTTGATTCGTAAGGGTACTTTCACTTTCCAGATATGAATCGACTTGGAGATT
GATGTTGTGTCAATAGGGTTCAAATATATTAATTTCAGTGTAAAGATGCCATTATTGTTT
AGCTTCCAGAAACCTATCAGACTCGTCCCATAACTGGACATCCATGAGTCTTATCATTAA
GTCTAACCAAGCCTCCCATTGATGACCTATTAAATCTCATCGGAATTGAATATTTAAAGG
ATTAGACTGTGTAAGTGCATCTAGTGTCCTTAGTGATTTT