Contig Data
morexGenes
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Map Locations of contig_67539 (3752 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_67539

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75283 1 1324 bp MLOC_75283.1 Available Available LOC_Os06g02510.3, FRAME:-2, EVALUE:1e-111, 13106.m00175 protein ribosomal protein L13, putative, expressed





CDS Structure of MLOC_75283






Contig Sequence (3752 bp)

>contig_67539 3752 assembly3_WGSMorex_rbca.fasta
TAATGCATTTTCTAAGACTGTGTTTGACTATTGATAAGATTAATATTATATGAGATGTAT
AATATAAAAATTATATCATTGGAAACTCCTTTCACGTATAAATTTGACAATATGCTTTGT
ATAACTTGCATGTCATATATTATTTGCTCTAACACATGGTCAAAGTACGCATTAGGTCCT
ATAAAAATGGATAGAGGGAGTACATATTATTCTCCCTTCTATAAAGCTATTGGCATACCC
TTGAAAAGGAAAAAAGAGTAAAATTTGAAAGGAAAAAAAACAGAAGAAAAGATCTTTTCT
TTCGTTTACAACAAACACTACTAGTTTTCTGCATGCAAATTACTGTGATGAAATCACATT
CATGGAGGACTGGGAAAAATAACAAAACCAATACTCATTTTGAAGTGTTGATTTTCTTAT
TTGGACATCCACCGATGTTATTTCACCAACAAAGATGGTTGACAAGAAAATCACAAATTT
TGGATTATTGTACTTTTTTTCTATTTTACTGTTCAGAAGAGTTTCGAGCATATACTCCAC
GCAAGGTCAAAAGGCAATTTGCTCTTATTTCATACCGCCGGTACTTCCACCAAAAATTTA
CGAAAAACAACCGTCATAACTTGACCAGTACATTTTGGGTACAAATCGAAGAAGAAACAA
GTCATAGCCTGACCCTCCAACAAGGGTAGAAATCCATCGACTCACTGAACAGCATACCAT
GCAAACAAGTACCACGTATCAAAACCATCGCCTGGTCTCTATTTCCAGCCGCAAGACAAA
ATTTAGGACAAGTCCCCGATGATAACATTCACTAGCATGAAACAAAATATCTTATCACTT
CTTTTCTTCCTTCTCTGCCTCGGCGGCCTTCTTCGTGCGGGCACCAAGCTGCCGCTGGTT
CATCCTCTCGACACAGAGCTTGCCGTAGGCCTTGAACGCCTTCATCTCCTCAGTGACCTT
CATGAGCTCAACCAAGCGCTTCTCACCACGAGTAATAGGCATATAGTCACCCTGGACCTG
GGTGGCTGTGGCAAGTTCCTCAGGGGTAGAATCACCAGCCTAAGACAAATAGCGTAAAGG
TCATGAACAGGAGAATACATAGCAAAATATAAAATGGTGTACACAAACAATAAACTCCCG
CCATACCTTAACCTTGCGAGCACGCCTTGGGAAGATAACCAGCTTAGCCTTGTACGTCTT
GAGTCTCTGAATGTTAGACTGCATACCCTCAAGTGACCTGTTTTTACGGCGGTGATCCAC
AGAAATGCCAATAGTAGGAGCTAGCTTCTTCGGGATGCCCGCTGTCTGCAAATTACAGCA
TAAATGAACATTAGCAGAAAGATACAGTATATGATACATACTACATGAGAAATGACAGTA
GAATCTGGATAGAAAATTGGATTGCAAGGAGGATACACGAAAAGCACAGCAAGCTAGCAT
GAGTCTGCATGCAAAACATCAGTTCATCACTTATAGAAAGGGAAGAACAATAAATTATTA
CTAATATGAGTAAATTTGCTAATAATAAAAACAAATACCGAATATGAGAACAATTTACCA
GATACATGCATGACAACAACTAATGCAGAAAATATATCACATATATTTAATAAAGGGTAT
ATTGATTTTCTCCCACATTTAATTAAAAAAAGGCAAACCAGAGAAAGAGAGATGGTTTAC
AGGATTTAACGGTATAGAAGAAACAAGTCACCTTCAGCTCCTCAAGGGTAAAGCCTCTCC
CAGCCCTTGCCTTCATGTTGTACTTCCGAGTCTGGCATTGCACAATGGGACGAAGAGGAC
CAGATGTTGGGCGAGGGAAGATCTTCACTGCCTTCTTTTGACGAGCTGAACAAATACAAA
TTGTGTGATGGTTATTCAAAAATAGCCAAGCAGCAAAAACACAAGCCCCAAAAAGTTGCT
AGCTGGCTAGTGATGCTGAGCAGCATCACAGGGATATCATCACATGTTAAAGATCAGGTG
TGTGCATATGAAGACATGCTGAGTCAGATCAGTGCATGCATGGCACCAGAGGTACACCTA
AATTCAGAAGAAATGCATCCAGAAATGGTATTGAACAGACATATCTAACAGTTGTCTTAA
GTTTGTGTACAACAGTTCAGGTAGGTTTGCTGGAAACAATTGATTGACCTGGCGACAAAT
ACTGCCTCAGCACAGGTATTCTTTTCTATTGGATTACTGGCAAATATAGATTGTAGTCAA
GACATAACATAGATTAAATGATGGTGATGAATGACAGACAGCCAATGTTATTATCACGCA
ATATAGGATACAATCAACAACATAGAGCTCTGTCCATCACTCTAGCAGGGGTAATAAATT
AACTAACCAGAATTTAACACTTAATTATCACTGCAATTACCATGGCGTGATACATAACAT
GTACAGTTACAAGTATATGACTGATAAAACACGCGACAATGTAAGAGCAGGGTTGCTCAC
CAATGCGGCGCCTCTGCTTGCGGGCAGGCTGGTTGAACCAGGTCTTGACATAGTTCTGCC
AATGCTTCTTGAAGTGGCCGTTGGGGATAACATTGTTGTGCTTCACCATTTCGACCCCTT
CTTCTTACCTGCACACGATCCACCAGACCAACACAAACACGTCACCGCGCGAACTAAACG
ACCCACCTCTCCAAACTACTGAGCAACACAGTGCGCATGCTAACAAGCAAGACCATGAAC
GCGTGGCGGATCACAAACAATAGTGCGCGACTAATGCTACGCATCCGTGAGGAAATCAGG
AACCTAGTGCTGCCACACAAAGAACTAGAGCGGCATGGAATACACGCAACATCTATTCAT
CGGGATACAGGAGATGATTTCCACCGGACGGTGAAGGTGAGATGACGCGAGCGACAGAGC
GAACGGAACGAACCTGCACTGCGGCGGAGGGGAGGACGAAGAGGATGCGGCGGGAGGGGA
GCGGGCATTTCGGCTAGGGTTGGGTGTTTATAAGCGATCCCTAGCTTGGACGGCCGAGAT
TTTTCGATCCTCCAAGCTCTTTCGCCAGAGGGGCCGAGGGATACAGCCCAATAAGAGAGT
CCACAGGAGGCCCCTCCTTTCGCACGCGTCTATGGGCCACCCCAATAGCTTGATCGGTCG
TCGGTTTGTTCCGTCTTTTTTTTCTTTTTTTTTATTGGTTTTCTTATTTATTTTTCTGGG
TTTTTTGGTATCTTTTTTTTAAACCCCTTCCATATATTAATTAATTTAAAACATTCGTGC
AATCATCCATTATTATAAATTTAGCATTATTAAGAAGTACCTCATCGGGCCTGTTGTAAA
CACTAAGGAGCAGTAGTCATTGGATGCTGGTGGCAATTAAGGTGTGGGATTAATGACGTC
TGATCTGCGTGTCAAAAGAGCGAGCCAGAGGACACGGATGCACCGACCGATCCGCCGGCA
TCTTCATGAATGGATCAATTGGCTCTTCTGTACTCGCACCAGTATACTAGTACGGAGACT
AAGTATGTTAGCCTTCTTCAAACAACTGCAGAAATGAGTGGTTGGCAAATGTTTGGAGCA
CATGCAAGTTTTTAATACCTTGATCACGTCGGGCGCATGGATCCTTGCACTTTGGTCTTG
GCTCATGTCACAGTCACACCATGCATGCAGCAGCGAACAGCGAGCAGAAACTAGTGTGGG
TAAGAAACGCCATGCTTAATGGCGTTTGGCGCCTGTGTAGAAACGCCAGTAAGGGTGGCG
TTTCTAGGTGATCTGCAACGTGAGCTAGACTG