| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_67530
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_75278 |
9 |
1651 bp |
MLOC_75278.2 |
Available |
Available |
LOC_Os09g17750.1, FRAME:+2, EVALUE:3e-150, 13109.m01707 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
CDS Structure of MLOC_75278
Contig Sequence (6100 bp)
>contig_67530 6100 assembly3_WGSMorex_rbca.fasta
ACAAGGGTATGTGTATCCGATCTCTCCTCTTGTAGATGCTCATCACCATGGGTAGATCTT
GTATGCGCGTAGGAANNNNNNNNNNNNCCATGCAACGTTCCCCAACAAGGGTGTCTACTA
GCATTGTTGCACTCTGTTGCAATACTCTCTGTAGTGTTATCTATTGCAATATTCTATGTA
GTTCTATCAGATTCACTGTGGTCACCACCTTTCCATGCATGGACACATGTGAAAGTCCTA
CCTATTAACTTTGGCGGCCCTCTTGCGTGGTTGTTCTTCGAAGAAGATGTTCTGATCCCA
AAACCATGCTTGAAAGCATACTTGTTGTAGTAAGCTCTTGCATTGTCAACTATATCAAGT
GTCATGCCCGCATATGGAACAAGCAGTTGGGATGATATTGCTTCATCCCCTCCATCATCA
TTATCCTGTTGCACATCAGAAGCATTAACCATCCCTTCCATAATCACTGCATTTCCAGCA
GAAATTTGCTCCCTAATGTAGCTCTTATCATCATCAACTCCAGCTCCAGCAATCTACATT
TTGTTTCAGTGTTTCGGCGGAGAAAACACGAAATTATCAACAAATAGGAGGTAGAATGCT
ATACTTTAAATCATGCTACAGCTGCAAGTACAATCATCAGCTGCTTCTAGTAGAATGATT
ATAATTTTTGTCATGTTATTTGTAAGTTTTTCCTTGATAGATGCAACATTTTTTTGTTTT
AGATTTTCATAAGGGAAACTTGTCTAGAAGGGACAATTTTTGACATGGACAACATGGATC
AATAAAGGACATTTGTGACATCAACATAGAGCAGCACATTTACAGCATAACCATAGTTTT
CGCATCATAACCAATGCTTTTCATATCATCACTTTGATGCAACATGGACTTTTAGTTGAG
GAATTTTTTGTTGCAATTCCTAAATTGAATTTTCTAAAAATTAGCAATTCATACACATTC
AGTAAACAGAGGTTCAGTGAACAGAGTATAGATGATGATGCACTGCACAAATTGCTGCAT
ATGTCAGTAGTCATTGAACAGAGGGGCACAAATTCATTTTTTGATGCATACTTGTGTCCA
TACTTTTGTGTGAATCTAGGGTTTGTTTGCGTACTTACCCAAGCTTGTGAGGAGCTACCC
CAGGAGCCATTAGCTGAGAAGACATGAGGGTTCCGTAGCTCCTCTGCAGCTCCAGACCGG
ACAATGCGGTCTCCAGACAGTATTGGGGCCAATTTGGCTTGCCTGCTGGTGGATGGTGCA
CCAGAGCTTCGATCCATGGCAACCGATAGCATGGATCGGATGATATGGTGATTTGCCATT
TGCGCAAGGCAGGGGAGCGACTTGCTGCAGAGGGCGATGTAGTTGCTTCCCGCGGGGCAC
ATGAGTAGGTGCCGCTGGGGAGAGCTGCAGGTCGGGGTCGAGGGGGAGTTGTTGCAGAGG
AGTAAGTGCCGTCGGGGAGAGCTACAGGTCGGGGTGGGGGCGGAGTTGCTGCAGAGGAGT
AAGTGCAAGTCGGGGTCGAGGGGGAGTTGCTGCAGAGGAATAGGTGCCGCCGGGGAGAGA
TGCAGCTCTGGGTCGGGGCCGGGGAGTTGCCGTCGGAGGAGCTGCCGCCGTGATCTCGCC
TCGCCCTGCTTCGGGGCAGATGCAGAGGACGAGCGTGTGGGAGGGAAGGGGAAAATGTTT
CGAGCTCAGAGTTTACGGCATCGTTAAAGCATCGCGGGGCGGAATTAGTTTTGATGAGGT
CCATTAGGACACATGTCGCTAATCAAGCGGATGAAGTACACCTGAAAACTGATGACTGTT
TTGGCGGCTGCTAAGTCGCGATTAGCAGCCGTCTTTATAAGGACATGTGTTACTTAATAT
ATGACCTTAGGCTTTTACGGAGAAAGAAAAAATGCTACAGTCACATTTTCTGGTATAATA
AAAAGCGAAATAAGAAAACGCTATTTTTGGACGCCCAGCCGCCCAGGCTTTTTTGCCAAC
TCGTTCCCCGCAGCTTCCAGCAAGGAATGCTTCTGGCCAGGACGCCAAAATCCAGCCGTT
CGTTTGAGTTGACGCAGTGTCCACGGGTCCACGACGCCGCCATCGCCAGACCCGCCGCTC
CGCCATGGACCGCGACGCGCTCCGCATGGTGTGCTCGCCCGAGTTCTGGCGCATGGGCGT
CCTGTGGACCCTCTCCCTCCTCTACTCCTACCTCCTCCTCCTACTACGTGGCCGTACCGC
CGCCCCTCGCCGCCGGACGGACGTAGGTCTCGGCGGCGGCGGCCGCCCCATATGCGTGGT
CACCGGGGTAATCTCGAGCTGCCCTACCAGCCGCGCCTGCATATTTTATTTTACTGTATT
ATTTATTACTCTTCTCATTGGTGCGCGGACTTCTGACGGTGCTCCGTCGATGGTGCGTGT
TCATAGGCGACGTCGGGGCTGGGCCGGGCGGCTGCGGCGGCGCTGGCGCGGGAGGGATAC
CATGTCGTGCTCGGTGAGTCGCGTGTATCCTCGTACCCGTGCGGGCATTTCGTCGAGCGC
TTGGTGCGCCTGGTCTCGTGCAAAATAAGAGTGTCTCTTTCTTGAACGATGATGAATCTG
CAACCGCCGATGTCATGTTTCATGTCATTATTCACCACCTGATCTACAGATAAATTGATT
CTCTGCTGCATCTTGAATTCTCGATTGCATTCATCTTCATTCTTTATTTTGTCCTTGTCG
CGGGACTTGGTATTTTCAGCGGACTAAAACAATACACGTTCAATTTTGTGTCAGCTGGAC
GCTCTGCACAATTGCTGAGTGAGGTATTGTTCGTAGCTTCGGTTGGGTGTCTGTTTGCTT
ATGTTTGCCATTATCGTCACTGCTGCACTCTATGTAAACCAGACCGCTAAAGAAATTCGT
AGGCAACAGCCGGATGCCTGTCTTGAAGCCTTTCAAGTGGACATGTCATCCTACAGGTCA
ATTAAGAAGTTTGAAGCTTCCCTCAATCAGTGGATTCGGGATTCGAAACTGGAGCCTTCC
ATTCAGCTTTTGATCAATAATGCCGGGATGCTTGCAAAATCACACAGAGTTACCGAGGAT
GGGATTGATGAGTACGTGCTTTCCTTGCAATTATTCTTCTGAAAGAATTCTGTGGCCTTC
AAACCACATGTTCTCTTAATATCAGCATTATGCTTTCTTTTATCTAGTCAATTCTTTAAG
TGAACCTTAATGCGTGTGACTTTCAGAGTGATGCAGACAAACTACATTGGTCCATTTATC
CTGACCAGCATTCTTTTACCACTGCTGAAGAACAGCCCGGTACCTTCCCGGGTGGTTAAT
CTAACATCTTTCACACACAGATGTGGTAAGTTTGAAGTTTTTCCTATTGTATATAGTACA
CCAACTGTATGAAGTTTTTCTCAGCCTATGTTGAACTATTGTTGCATAGACATTGCCACA
TTATGCAATTTTTTGTATTGCATACATTAGATTGCATCTATCTAACAGAGAACTGGACGT
CACTCAGGTGTCTAGGTGCGTGAGTGCATGCCGAGCCCACCTGCCAAGACTCTGTTGGAA
CTCACAGCTGTCTGGTCTAGTTTATTTACTTCCTCCGTTCCTAAAGTATAAGTCATTTTA
GACATTTCACTACGGACTACGTACGAAGCAAAATGAGTGAACCTACACTCTGAAGTATGT
CTATATACATCCGTATGTAGTCCGTAGTGTAATCTCTAAAAGGACTTATATTTAGGAACG
GAGGGAGTAGTCTGCATCTATCTGTTGAATTATGTTGCCACTCCGTGTGAATTTCTTGGT
TGTAGTAGCTCCATTGCCAAAATCTAGTGGACCACATATTTCCTTGTTGCGTCTATTTTG
AATCTGGTATACTATGTGTATCATTTGCTCTTGCAGCTGGTCATATAGTGCCACCATTCT
AATAGTTTCCCTCTCTCCCCGTATACATTCTCTTTGATTAACACGTGCAATTATTACATC
TCCAGTGTCAGAAATTGACGTGTCCAAGGAGGCACTGCGAGGAGTGAAGTTTGGTCAGCC
TTCAGTTAGGGGAAGTTACCCCTTAGCTAGTACGTACGAGTATACCAAATGTACGCCTCT
TGCTTTAATATTCATTTCATGCAGCTATTATCTACAAAGTCTACCGGTCTCATTTTCTCC
CATTGCAGTTTGTTTACTTGTCTTCTCATATGAACTTCATCGACAACTTCACATCTCTTC
TGGTATCTCTGTCATGTATGTGCCATTTAGTCCTGTCTTGTGTTTTTCCCTTTCATGTAT
TCTTCATGCAGTTGTATTTGATTCACTTGATAAGATGTGTACCAGCGCTTTTTGCCCATT
GCCCACCAAGTAAACCTCTACTAAAACATGTCTGATCCAAATGTCAAAGTCCTTGCAAAA
TTCTGTTCTTCTGTAGGTCTGTTCTATTTTCCTTTTTACCGAAATTCGTTTGTTATATTT
GCTACAAGGACAGATTCTGAAGGCTCGTCTCTCTGGCGTGCTAAACTATTTATGATTACA
TTACATGCTATGCTATCTTAAGCCCTTTGAGTTTTTTATCATTTGAGTTTGTTTATTCTC
ATTTTTAAAGTCTTAAATTTCATGCTTATAGGGCTGCGGATCCAGGTGTGGTAGAAACAC
GCATCATGCGGGAGCTCCCTCCATGCCTTTCTCGGTTCGCGTTCTTTATTCTGCGCACCC
TGAATCTCCTACAGCAGACAAATACGGGGATTGGTGCTATCCTTGACGCAGCCTTGGCAC
CGCCTGTAACCTTCCTGTCAAAACCCTCTCAAGCTTCCGCGATTTCGCAACCAAAAAAAA
AAAAAAAACGACGCATCGGCATTCAGTACCAGCTCTGAGGTTTAGTTCTTTTATCGCAGG
AAGCATCCGGGAAGTATTTCTTTGGAGGGAAGGGAAGAACCATCAGGTCTTCTGTGCTGT
CCTATGATATAGAGGTGGCCAAGAAGCTGTGGGCGGCATCTTCAGCGCTGCTCCGGGAAC
TGCGGCTTAGAGAGTCTGAATTAAGGACTGGTTGAGCTAGCTTGTAAATTCGACATTGTT
AGAGCATCTCTAGCAGTCCCTTCGGGGACATCTGATAAAATTGGAACGATACAGAGAGCA
TCTCTAGTAGATCCCCTAAAAGTCATATTTGAGGGAAATTTTCGGGTTTCGGGGAATTAA
GCCCTAGCGATCTGATTCAGAGGTACTCCCTCCGTCCGGGTTTAAAAGGCCCTTAGGCAA
GGGCTGCACGTCCGTCATTTTTAGGCCGCTCTCGAAAAACATTCACTTGTCTCTCCTATT
TAATATCAACACTGAAGGAGATCAGCTGTGCATGTGTATGGGATTGGTTGTCGTTCAATG
CTAGAGGAGACCAATTTTAATCTCCGCGCGAAATGGGGAAAAAAATCCTATGAGACCTGG
TCTCATAGCCAAGCCTAGCCTATGAGACCTGGTCTCATAGCCAAGCCTATGAGACCCTAT
CGGATAAGCGACACGTGGCGTGAACAATCTCAAACAGCTAATTCTTTACTCCAAAACCAA
ACGTACAATACATCAAACTCTAAGAGATTCATGGAATTAGTTTTCTTATTTTCCTTGCGT
CTATGACGGCCACGCCGAAATGGCCTCGATGGCGGCAGCCAAATGGCACGCCGCAGCGGC
GACCTTTCGTCCATGACCTAGATGAAGGAGCTCATCGCCGGCATCCTGTCGGACAGCTCG
TCCATGACGCATGCACGCCACGTTATTGGCCCAGCGGACAACATAGGTCACGAGCATGTC
ATGCTGGGCCAATAACGTGGTGTGGCGTGCATGTGTCATGGACGAGCTGTCCGACTGGAT
GCCGGTGACGAGCTCCTTCACCTAGGTCATGGACGAAAGATCGCTGTTGCGGCGTGCCGT
TTGGCTGCCGCCATCGAGGCCCTTTCAGCGTGGCCGTCATAGACGCGAGAAAAATAAGAA
AATTAATTCCATGTATCTCTTAGAGTTTGATGTATCGTACGTTTGGTTTTGGAGTAAAGA
ATTAGCTGTTTGAGTTTGAGAATAGACATAAATTGAATTAGCATGCTTTGAGATTGTTCA
TGCCATGTGTCGCTTATCCGATAGGGTCTCATAGGCTTGG
