Contig Data
morexGenes
Links



Map Locations of contig_67389 (5117 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_67389

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75214 4 1823 bp MLOC_75214.1 Available Available LOC_Os03g60400.1, FRAME:+3, EVALUE:2e-98, 13103.m06626 protein 40S ribosomal protein S23, putative, expressed





CDS Structure of MLOC_75214






Contig Sequence (5117 bp)

>contig_67389 5117 assembly3_WGSMorex_rbca.fasta
GAGGCACGGTTTTGCTTCCGCGAGAAGCACGACCCGTGCCTCTCGAAAAAGGAAAAAACC
GTGTTTTTTTGTTTTTTTCTATCAGGTAAGGCACGTTTTATTGTCCTTTTTTTCTTTTGG
TTTTTTTCATGAAAATTTTTCATCAAAATATATCAACGTAGGGATCTAGCTATGAAGATT
TCAACGCGAGAAAGCCAACGATGAAAACGGTTCGAGATTTGAACCCACGGTTTAGGAGAT
AAAACATTTTAAAAATACGGACCTACGAAAAAAGAGAAAACTCCCTGGTTGCAACAAGTG
ACGCGCATACAGTGCGTTATTTTTCACAACCTGTAAAAATGAGAGTAATCGTTGTAAGGT
GTGTATTCGCTAACTAGTGATTTCGTAGAAGGTCCCGGTGCGCTTTTCTTTTTGCCATTC
GCTCTGCGCTTGCGAACTGGCCTGGCCATTTTCCCGCCCTTTAGCGATACTTGCTCGTTT
TGACGCTCAACAAATTTGGCCCAACTAAAGAGGCCCATGCCAATGAATTACTGAGCCTGG
CACATCTTCCTCCGATAAACCCTTGGCCCACTCCCCACCTCCTCCAAGTCCCAAACCAAG
AGACCTTTCCGCCGCCGCCGCTAGCTCTAGCGCCCTCGCCGTCGGCCGCAGCCAAGCTCC
CGACTCGAGCTTCGCGGCCTCCCTCGCCGGTCCAACATGGGGTAATTTAACATTCTGTAC
TCTAGATTCGATTGTCGACAAGTCCCGCTCTGTTCCGTTCGATTTTGCTGTATCAACAGA
TCTGCTAGAGAGCACCTCCATCTTAGATGTGTTCTTCTGGATTATAGACCCTTGTCCGAC
GCATATATGAAATTTGAAGTGGATTCTTAAGAGTAGTGATCCGTATTGCTTCCGTGCTTA
ATTCAAATCGCGTGCATACCAACAAAATCCGCTGTGATTTGAGTTTACTTTAAAAAATGG
TGGAATTGGCTTAGCAGGGGGGCTGGCCTCACTAGTACTAACATTCGACACCTTGATGGC
CTTTGCGGTTTATCTTTGGCGTGGGCAGTACTAGTTATGGTCTGAAATGTTGCTTGGTTT
AGTTGTACAAATCGTTCACCTTAAATCCTGCTTTTGCTTTCACGGTCTTGCCGTCAGTTG
TCTGTAAATTTGATGCTACTTGCTGCACCCTTCTCTATTGATTGAAGAAGCAAACACCTC
TCCTGTGCAAGTGCTCTAGTTACTCCTATCTATTTCCTTTTGCATTAACAAGGTACCAGA
ATATGCATTTCTGCAGTAGGCCTGAGAATGATCCGGACCATGTAGCTTTCTAAGCCCATG
TATCAGATGTACTTTGAGTCAGCTTGTCCTGATTTCTGGATTAGTGCAGTTTTGTGTATC
CAGAGTGAGAAGTTTATTCCAGTGTAGATAATTTAACTTAGTTTATGAAGATCAGGTGTT
GAGCCATGACTGTTCAGTGTGATTTTTAATAGACCGCTGAAGACTTATCTGCACGATAAA
TTTTTATTTGCATTCACTGTCAAAAAGTTCCTTAAATTGGCTAGTGTAAGAAACTCAGGT
TGTTGCAATCAGATACGGGATGTATTACTTAGCAAGGTCTTGTATTTGTGTTTTCTTCTT
CTAATTCTGCTTTATTATTATCTTTTGTTCAGTGGATCTTTGTGTAATATTCTTGTTAAT
TGCTTGTCAAGTTGAAATGTTGAATGGAAAAATATGTCAGCAATATTGAACTTCTCTATT
CTAATATGGATGCAATTGCTTCCATATACTGTACTAATTCAATTTAATATGGATGTAACT
GCGTTCATTTACTGTAGTCATGTCTCATGTGCTTGTACGTTTGATCAAGCTGGAGCTTTT
TATGGTAAGCTTGTTCTCATATGGTTCCTGAATCCTAACGTTTTGCAATGCTGATGCAGT
AAGACACGTGGTATGGGAGCTGGGCGCAAGCTCAAGACCCACAGGAGGAACCAGCGGTGG
GCCGACAAAGCCTACAAGAAGAGCCATCTGGGGAACGAGTGGAAGAAGCCCTTTGCTGGT
TCATCCCACGCAAAGGGGATTGTCCTTGAAAAGATGTAAGTTCGATCAACTACTAATACC
CGTTTCATCTTCTGAAGAAGAAGAACAATTCGATCAACTACTAATACCCGTTTCATCTTC
TGAAGAAGAAGAACAATTCGATCAACTACTAATACCCGTTTCTTCATCTTCTGAAGAAGA
ACAATTTGATAACTGACGCAACACTGCTTGCATTATATGTAGTGGCATTGAGGCCAAGCA
GCCCAACTCTGCCATCCGTAAGTGCGCTCGTGTCCAGCTGGTGAAGAATGGAAAGAAGAT
TGCCGCCTTTGTGCCAAACGACGGTTGCCTGAACTTCATCGAGGAAAATGTAAGTACTAT
TTCTGCCTCCGGAACTTCACTGTCAACTAGTATGTGTCAGACCCCTCTCTCTGCTTGTTA
ACACTGCCCGTGATGAATGTGTAGGACGAGGTGCTCATCGCCGGTTTCGGTCGGAAGGGG
CATGCCGTGGGAGACATTCCCGGTGTCCGGTTCAAGGTGGTGAAGGTGTCCGGCGTGTCC
CTCCTTGCCCTCTTCAAGGAAAAGAAGGAGAAGCCCAGATCCTAAAATGGCATCCTAAAA
TGGCCCCTCTCCATTCTTCCAAGATCGTCACGGCAGCCATGAAAACTTGCATCCTGCTGG
TTACTCGCAATGTCTTTTAGCCTGTGGATCTTAGTTCTTGTCAACGAAACATCTGAATTC
TAAGCTGCCAAGTTTCAGTTTCTACTTCCGCCTCCGTTTGTGTGTGTGTGTGCGCGCGTA
TCATATTGCTGTGATATTTGACGTACCGTCATGGTCCTGCTATCTTTTTCAGCCTTCATT
CATTCATGTGCTGCTATTTTTTTAACACACCCAAAACACGCAAATGCATCTCAAAATAAA
TATGATATATTTTGTTAAGATGCCCCTTGCCATGTTAAGATACATCAATGGAGACAGATG
TAAACTGATAAGAAGCAGTAGCCGAAGGCAAAATCCAGCAGTTTCAGTGCTTGATCCGGG
GACGGGGCCACTCCAGCGACCAAAGGGTGGCCAGACCCGTTCGCCCTTCCAGTTCTCTCT
TTTGTTAAGTGTCATGGAACAAGAAGTGCGGTTCTATAAAAAGCTAAAAGGCCGTGCATA
TGGTGAGTTGGTTTTGTCAAGAATCAACAACACAGAGTTGACTAACATGAAAGGCCCCCC
TATAGCTTTAACGTGTGCGCTCCATTTCCTGAAGGTTGACACACAACCAAGGCCATGTTT
ATATATGTTCCCATCAACCCAACATCCCGCGATGATCGAAGCAAGGTATCCCAACTCATA
GGTCACTCTCAAGATAGAAGATGCATCTTGGTCTCCAACTCGAGGCATCCTAATAAATCC
TATAATAACAAAGCACCTGAAAAAATGTTTGAGAAGAAGCAATTAATACTGGTAAGGTAC
TTATGCTTGTAAAATGTATATACTGGAAATAACAAACAAATCAAATGACTTAAAAAAACA
TAAATCAGATCATGGTGGCTGGAAAATTCAGTGGGTTTTAAGCACCTAAAAAAATGTTTG
AGAAGAAGCAATTAATACTGGTAAGGTACTTATGTTTGTGAAAATGTATATACTGGAAAT
AACAAACAAATCAAATGACATAAAAAACATAAATCAGATAATGGTGGCTGGAAAATTCAG
TGGGTTTTGGTTGTCAAGTTTGTTTCAGTTGGCATGTAATGATAGCTCAATGCTGAACTT
TGATTGCCGTGGCCTATCTAAAAACACAAATGATCAGTGGGTTCTAACTACGTGTTTTAC
AGTACTTGTTAATGTGTATTCCGTTGTGTGACTAATGCTGTTGGTAATATGCAAATACTG
AAACGGGGGTTATCATAATTCGAAGAAAAATCAAATTATAAGGCAGGGCTCAACAATATC
CATGGCTCCATGCACATCTAAAATCCTGAAGAGTAATAGAACAGTGAAAGAAATATCTAG
TCTACAAAATGTTACTCTATTAAGGTTCCCATGTTTGTAAAAAAAAGGGTGTCTGAATAC
ATGAGTTGAACAAGAATTCAAATACTCGCTCTGTTCACTTTTATAAGGTGTTATAGAAGT
TTCAGACAACGTGCAAAATAGCTTAATAATAGTTGTCTGAAACGACTTACAAAAGTGAAC
GGAGGGAGTAACAAACATATAAATCAAATTATAGGAAAGTGAATCTCCATCTTCGTAAAA
GTCTAAGAAACACAGATAATTATCGAACCATCAACTAACAAAAAGAACAACCATAATCAT
ACTACTACATAATTTCAGAACCACCAAAAGGATGGTGAAGCAGAGAGTGGGCTCACTGTT
GTCTACCAGCACTAATATATTTGATTTGATACAGATGCAGAGGCCATGAGCATAGGAAAG
TAAGCGACAAACAAGTAATTCTTTTAGTGATAATAAATAGCCATGAACTTCGAAAAGTAC
TGCAACACGCAGTCTCTCAGCAAGGATTACAGGGCTAGAAGTCGCAACTCCAGACCTGAA
CAGGGGACAGTCAACATAAATACGAGTGCTCGCGACTGCGGGTGTGTGAGCGAAACTCCT
AATCGCTGTCCGGCCTTGCTTGGATGCGTTTCAGAAACGAACAAGTAATCCCCAAAACCA
CAGGCAGGGGCGGATCTATGCGCACCCAGCAATTGAGTGTGGGATCTAGCAAATCGCTGC
CATCGAAGAGAAATTAACTAATCGCTGGATGAAAAACAAGCAAGCTCATGTACCTGGAAA
CCAAAAGGAAAGGCTATTCCGACGGGGGCGGCGCGCGTGAGAGGTGGAAGGAGGCGACGG
ATCGAGGCGTCGGCGACGGCGACGGCGACTTATTATTAGAGCTTTTTTACCGTACCCTGT
ACTGTTGAAAGGGGAGGCAGCAGTATAACATAATCAACCCGTCAATTTCCCAAGGGTACG
ATGGGTAGAAAAATATGTTAGTTAATTTACTAACTATGGAGCAGACTTCACGCCCACGAA
GCGGTGCCCTGGTCCTTCGCGTCCTTATCCTTGCCGCGGCTCCTGCTCCTTCTCCCTGCC
GTCGCCGCCGCCGCCAC