morexGenes - Barley RNA-seq Database

Contig contig_67111
Source Contig contig_67111
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_67111 (7966 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_67111

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75090	2	2186 bp	MLOC_75090.1	Available	Available	LOC_Os01g04290.1, FRAME:+3, EVALUE:0.0, 13101.m00387 protein glycosyl hydrolase family 10 protein, putative
CDS Structure of MLOC_75090

Contig Sequence (7966 bp)

>contig_67111 7966 assembly3_WGSMorex_rbca.fasta
GACGCATTTCAGTTTCAAATTTGGGTCAGAAATGGGTCAACGCGGACGTGAAGCGGACAC
GTTTTGACAATGGATCGACACGTTGGGCCATCACTATTGTCCGCGCGGATCCAAACAAAC
GAAGGCGGATGAAATGAATCGTTCCATTAAAGTTGGTCTAATACTCGCGCAGAGAGGTGC
CCGGCAGTACGTCTTTGCAGTGGCATTGTTAGAGTTGTGCGTCTAGGTTCACAAAACTAC
AAATTCAAAATTGCTAAAAGAAGCTGTAATTTATTTTCATAAAATCGGAACCAACAATTC
AAGAACCATTTCCTTAGAATCTGGTTGTGCACCAAATTATAATCACCTTTGACCTATGAG
TGAACCCAAGGCCCTTCTAGATGTGTGTGTGTTTTCGTTTTTCTCCTTAAGGCACTTCGA
GACGCCACGAGAGAAAAGCCTATGTATCCTCTGTTCAAACATCTTTCGGGACCGGGAGAT
GCATGTTTGACGCTGCAAGGAAAAGGTTTATTGCGCAAGATCCGAAGTTATTGCGATTTT
GGCGGATGCATGCACGGTATATATCCATCGTTTGGCGCCTATTAATTCCTCGGTCTCAAC
CGTGATGAACAACTACTCTTGGACGTGTTTGCATGCTTTCGAAGTAATCCAGGGATATCC
ATGCATGCATTACGGCCGGTGCCCAATTTCGTGGGTCGGCGTGCTCATGCTCAGGAGCTT
GCTTCTGCCGTCAAGATTCCATAACGGACGTCACAGACCACCCAAGAGTCCATGGCCATG
CATGCCAAAACCGATTTTCGTAGCTTCACGGCATGGTTTGCGACTTAATTAGTAAACTAG
ATGTAAGCTGTTCGTTCAAAGTCCAAACGGCGAACCGAAGGGGAAACGCCCATCACGTAT
ATATGTCATGGGACGGCCGCGAGTAGGCACTCCTCCAACGGTGAAACACACCGTTCACAT
TCCACAAACGTAAAAGGCTCTCTTGCTAGCTAGGAGTAGATCTAAGACATACATACATAC
TCCCTTCGTCTTAAAATAAATATGTTAGACTTAATATAACTTTATACTAGATCTAAAACA
AAGTTAAGATAGTTATTTTGGGACGGATGGAGTATAATATATCTTCTACTCCTACTAGAC
TAGAGTAGCTAGTACCAGTAGATGTGCCATCATCATCACGTGTTGAAGTGTTCGAGACAA
AATTAATCATGTGTCAAAAGGATATTTGTACTTAGAAAAACTTCCAAAAGGTACCACATG
CGTACGGGCTGCTAGCTTAATTTAGCTTCTTAATAAGTATGCTTATGGGGCGGCAAATCA
AAGTGGAAATGCCCATCACGTATGCATACATGTAATAATGGGGCGGCTGCGAGTAGTAGT
CCTACAGCGTTGAAACAATCTGTTCATATTGCACGAAAGCAGAAGGTTTTCTTGCTAAAT
TTAAGACACGCATTGTATACTACTCCCTCCTTTCCAAGATATAAAAATGTTTTAGCTTTA
TTCAAATGAATCTAGACATGTTTCCGTGTGTCGATTCATTTATTTTAATCCATATTTAGT
TTATATTAAAATATCAAGAACATCTTATACTAATTCAGAACAAATGAAGTAGCTAGTACT
CGTGCACGTACTGTCATCATCATGATGTGATAAAAGCGCATGCATATGTAGGAAGAACTT
TCAGAAATTACATGTGTAAGGTTCATGACCTGTCACAATGGAAAGTATCATATAATAGTA
TCAATACATATAAAACAAATGTATGATACTACATTCATAATATACAATATCATACTTTGA
TATTATAGTGATCATATTTATTGTCATGCAAGACACATAATAATACATTATTTAATATAA
TACGGTATTGTATCCTCATATTCAATCCTCTTTTTTCATTTAATTATGTGTAATCTGAAC
AAAAATACCTAGTTGACATACATGCTATTATCTATGTTACTTTTATTGTGACCGGCCTTA
GCTCGTAGGCCGTCACGTATAGGCAAATATACTACTAGTGCTGATATGCATTTGTGTGTG
CCTAGCAACGAATGAAGGAAGGATTGATCGACCTTTACTCCAAATGGTGAAATCTCTTGT
TCACATTTCTTGAAGTAAGGGGGTCCTCTTGCTAGATCTAAGATGTATATTATACGTGTC
TGCTAAATGTCAGTCCCTTTTGCTCCATGTGAGGCTGAAGGCGAAGATAGCGTGAGGAGC
GTCAACCATGTTAACAGTGAGCTGTGCACAAACAAGAACAGGCGATACCAGTGGGAGCAA
GTCAGAAACTTGATTGTGCGGGTCGCAAAAGGGAAGGTGGATGTGGGCTCAGAGAGACGG
CATGGAGGATAGCTAGCACAACGATAGAAGAGGGCGAGGGAAGGGTGGGGCGGCGAGGCA
TCCCATGAAAGCACCTGTTAGCCGTCGGGTGGGGAGGAGACGGTTAGGGTAGGGTAGGTC
GACAACTGCATGAGGATGAAGAAGAAGAGGTTAAAGACCAACATTGCGTGATTTTGTTTT
GGTCATTGGATATAGATCTAGCGGTCCTGCTTCCTGAATAAAGATGACTGATACAAAATC
CCTTTCTTTCTCAAATCTAAGCCTTTCTAAATATTTCAATATAGACTACATATGAATGTA
TATGAACATATTTTAAAAAGTACATTCACTCATTTTATCCCGTGTGTAGTTTATATTAAA
ATCTTTAAAAAAAACTTATATTGAAGAACAGAGGGAGTATCTTCTATATAGGGAGGCTAG
TGCAAGTGTGCAACCAGATGTACAATTATCATGTGCCAAAAGCACATGTGTACTTCAAAA
GAACTCAAATAAAAGTACATGTGTACGGGCGACTCGCTACTAAGTTGTGTACATATAATA
CGACTATTGCTATGCATTTGCGTGTGCGCGTGCCTACCAACGACCGAAGGAAAGGAAGGA
TTGATCAACTTCTACTCCTCCGAAAGCCAAGAAAAGGATCGGAGTTGGGAGATGCTTGGA
TTTTGCTAATGATCATAACCCCAACAAAAAGTAACAGTTATGACGAAGCTAATCAGCTAT
AGCTGATCATTCATAGATCAACCTACTCCCTGGAGACACGGTCACGATAAGGGGCCCCGC
ATGTCAGCGGCACGATCCGGCAAACCGGCCTGATTGACTAATCTTGCATTGCCCAAACTT
GAGTGTTGTACAAAAGATAGGAGGAAAGATACGAGTTAGGTAGCCGAGATTGGCCATGGC
ATGCGGAGCTTTCATTCCCTACAGCTAGCAACGGGCTTCGGCCACCTTTCTGCTCTGTCG
CCATGGATGTGGATCGCCGGCCAAACTGACAGACCAACATATCATAGATCTAGAGCTTGC
TCGCCCTATAAATTGCCACCCTGCGTGCCTCTCTTCCCTCCTCACTTACCACACCCAAAC
ATCATCATAGCAGCAGCAACAACGCACACGCTACACACACATCGACGTGTGGTTGAGCGA
CGTACGTCGTCCCTTCGGTTCATCGACATGGCATTCGCTGAGGTATGTGACATGTCTATC
TGCTCCTTTCTCATGCATGATTCCAATACTTCAAAATATGCCGCAAAGAGCTAATCAGGG
GTCTCCTTTTTACGATTGCAATACCAAATGTTTACGCACGCGTAATGGAAGCGTGGACGA
AAAATGGCATGGGCTTTATGTGTTATGTTGCATGCTGGTACCGTCTACTAGTGACCCCGT
AAATTTTAGTAGATTTTGTCGCAAACTTGAACAGTTTTGCGTGAATTTGCTGGACAAGAT
GTGGGTTCCAAGCTATTCGATCATGCATCTTCTTCCGCCGGTTGTTTTCCAATCAATCAG
TTCCTTCTTTAAAGCCAAGCAACTGATCGAGCAAGCTAGCGATCGATATGATATATCATA
TCCCCATTCCCCAACAAGAATCGTTACACATGTCGTCCGTGCATTGCATGGCTGTCTGAT
CCCGACAAGAACGGGGCATCAGATCGCATATGCTAAGATTTCGCCAACCACATCGGTCCA
TCGACATTGTTTACAAGAACTATATATACTCGTGTGTTCCGTTGCAACGGGTTAATGTGC
GCGCGTGCGTGTGCAGGAGGAGGTGCCACTTGCAATGAAGTTCATGGCGGACGGCGGCAA
CAACACGGAGGAAGAGGCGGCCATCGCCATGAAGTTGACGGAGACCGGCGGCAGTGAAGA
CGAGGAGGAGGAGCCTGCCCTCCCTGTGAACCTGCTCGAGCACCATGGCGGCTCCTGCTC
GGAGGAGGCCGACGGCGGTCTGGGCGGCTGGGCGGCGGCCGGTGCGAGCACGCTCTCGGT
TCACCACGACCACGCGCCGCCTCCGCTCTCGGCCACGGCGGAGGACGTGCCCGGCGCGCG
CATGCGGAAGCCGAGTGGCCGGTATATCCTCGCCGCGCACCGTGCCGACGAGAAGGACGG
CCTCTGCCGGGAGATCTCGCACGCGCCCAAGCCCAAGGTCACGTACCGTGTGGCCGGCTG
GGTTTGCCTGGAGGGCTGCCCCAGCGTGGACGGCGGCCACCCCGTGCACGTGGAGGTCCT
CACACACGACGGCGCGCGGGTCGGCGGCGGCGTGCTGGTGGCCGAGCCGGGGAAGTGGGC
CGAGATCAAGGGCGCGTTCCGGGTAGACGAGCACCCGCGCCGGGCCGAGGTTTACGTCCA
TGGCCCGCCGGCCGGGGTGGACATCAAGGTCATGGACCTGCGCGTGTGCGCCGTGGACAA
GATCGCAAGGCTGAGACACCTCAGGAAGAAGACCGACAAGGTACTAGCAAAAAATTATCT
TTTGGATTTGAAATTTTTGAACTCTTTTTGATATGAAATTTTGAATGCCACGTAAATGAC
ATAAGCAAAACAACATGACGCCGGCTATGCGAAACAGAATTGCAGTGTATTCTACTCAAG
CGCATGCAAAACTATTGATCACCCAGCATGATATACTACATATTTAGATAACAGTTTTGC
TAAATTTCAGTCGTTCTAGACTTGACTATGTCTATTTTCATGATCTTATATAGTGAGATC
GGTGTAAAATTAAATATCTTTATTTTTTAATTCTTTATTCTTTATCTCAGTCGGTTGAGA
CCTAGGCACACCTTTTGATAATCATGTTTCTACGTGTTGCCTGCAGGTGCGCAAGCGTGA
TGTGGTGCTCAAGTTCAACCGGCGATCGGAGGAGGACGGGGCCGATGCCGAGGCGGCGGC
GGCGGCGGTGAACGGCGCGTCCATACGCGTGCTCCAGGTGGAGAACAGCTTCCCCATCGG
CGCATGCATCAGCAAGTCGTCCATCCAGAACCCGGCGTTCGTGGACTTCTTCACCAAGCA
CTTCGACCTGGCGGTGCTGGAGAACGAGCTCAAGTGGTACTACACGGAGGCGGTGCAGGG
TCAGGTGAGCTACGCCGACGCCGACGAGCTCATCGCCTTCTGCGACCGGCACAAGAAGCC
CGTGCGCGGCCACTGCATCTTCTGGGCCGTGGAGAACTCGGTGCAGCCGTGGGTGCGCGC
CCTCAACGCCGACCAGCTCAGGGCCGCCGTGGAGTCCCGGCTACGGGGCCTCGTCTCCCG
CTACGTCGGCCGGTTCCCGCACTACGAGGTGAACAACGAGATGCTCCACGGCGCCTTCTT
CCGGCAGCGCCTCGGCGACGACATCGACGCGCACATGTTCCGGGAGACGGCGGCGATCGA
CCCGGCCCCCGCGCTCTTCGTCAACGACTACAACGTGGAGAGCGCCAACGACCCCAACGC
AACGCCGGACAAGTACGTGGCGCTGGTCACGGACCTGCAGAGGCGCGGCGCCGCCGTCGG
CGGCATCGGGGTGCAGGGCCACGTGACGCACCCCGTGGGCGACGTGATCTGCGACGCGCT
CGACAAGCTTGCCGCCACGGAGCTCCCCGTGTGGATCACGGAGCTGGACGTGTCGGCGGC
CGACGAGGCGGTGCGCGCCGACGACCTGGAGGTGATGCTGCGGGAGGCGTTCGCGCACCC
GGCCGTGGAGGGGATCATGCTCTGGGGGTTCATGCAGGGACACATGTGGCGCTCCCACGG
GCAGCTCGTCAACGCCGACGGCACGCTCAGCCAGGCCGGGAACAGGTTCGTGGGGCTGCG
CCAGGAGTGGACGTCGCACGCGCGCGGGACGGTGGACGCCAACGGCCACTTCAAGTTCAG
GGGGTTCCACGGCAAGTACGTTGTCGAGCTGGCCGCCGGCGCCGGCGGGAAGCAGGTCAG
GCGCGCATTCGACGTGCACAAGGGGGACGAGCCGCTCGTGGTGGACATGAACCTGTGAAG
GACTACATATATAGTTGGTGGACGTGGACGTGGACGTGCGTGCAAGTGATATAGCTAGCA
CTCCAACATAGTACGGATTGGCTATTGGGATTGGGAATATGAGTAGCTAGTGGGGCCATT
CAGATATATACTGCCATTAGGCGGGATTGATTCAGAGTCACACGAAAAGGTATTGTAATT
TATGCTAAAAATGTATTACATATGGATTGCAGTTAATAAATGAGGAATTGTCTGTTTACT
CTGCTATTCCCACGAGGGCATGCTCATACTTCTTTTAGATCGTCAATTTAATCAACGAAA
CTCATGTTAAATATCATAAAAAGGTATTTTATTTTTTGACGTAGAACTTGAATTTCGTTG
GTCAAACTGATGATCAGGAAATAATACTACATGGATGCCTTATAAACTGGAAGAGAAGGA
ATGATAATCAAATTGGTGCAAATGTGCCTTTCAAAAAGAGTTGGTGCATGGGGGATTCAA
GTAAACCTGGATCGAACACGGCATAATTGGTGATTGAGAGGTGGTGGAGCCAAGAACCCC
ATCTTTGATTGTCACCTAGAGAAATACTACATGGATAGTTGATGCAAATGCGCCTTTCAA
AAAGAGTTGGTCTGCGGGGGATTCAAGTAAACCTGGATCAAACACGACATAATTGGCGAT
TGAAAGTTGATGGAGCCAAGAACTCCATCTTTGATTGTCACCCAGGAAATACTCTACTGT
TCTTTTCAGTCAAAATCATAGGAACATGAGGGGATTTACACTTGAAACTTGACGTGTTTG
GTATTGAGGCGTTGTTGCGTGCTCAGAGGTGTTGGGTCACAATCGGAATGTTATGTGTCG
TCCTCGATTGACTTAACAGATTGAAATATAAAGATTTAAAACAAAAAGTGGACCATCTTA
TAAACAAATCATCTAGAGTGATGAGCATTTGTCGGTTTACCCACTTACTCCTACAAGTCC
CACACATATTTCTATATCGTCACTTTAGCCAAGGAAACTCATGTTATGTATCACAAAAAA
TATATTATTTTTTTAAAATAATACTCAAATTTTTAAAAAATAGTGTTTATTTTTCTCGCA
ATTAACTTAATTTCATTTGTCAAAATGATGATTTGGAGATACATGCGTGCCTTATAAATA
TGAAAAGAAGGAATAGTAATTAAGTTGGTGCATGGACGCCTTTTAAATAGAGTTGGTCAA
TGGGAGGTTCAAATGAACTCGGATCAAACACGCAATAATTAAGGTGGTGGAGCCGGGAAA
CCCACATTTGGTTGTTGCCCTGCAGGTACTCTACCGATGTTTTCAGTCAAAAACATATGA
ACATAGGGGATTTACACTTGACATTTGATGTGTTTGGTATTGGCGCGATGTTGCATGTTG
AGACTGTGTTGGGTCACAATCGGAAAATTACATATCGTCTTTGATTGACTTCACTTATTG
AAATATAGAGATTTAAAACAAAAAATGGACTTTCTAATGAAACATAAAGAAAACAGTGAA
TTAAATTTTGTCTTGTTTAGTAAAGACTAATTTAATGTTCTTAGTCACTGCGCTTCTGTA
GTTTTTTTTTTATTAGTTCCAAAAATATTCTCCGTAAATTTTTAGGTCAATCCGAAAACT
TTTATTTCTGCACAAAAATAATACCAAGACAATTCTGCTGAAAACA