morexGenes - Barley RNA-seq Database

Contig contig_67110
Source Contig contig_67110
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_67110 (9139 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_67110

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75089	4	2183 bp	MLOC_75089.2	Available	Available	LOC_Os06g28124.1, FRAME:-1, EVALUE:0.0, 13106.m02900 protein glycosyltransferase, putative, expressed
CDS Structure of MLOC_75089

Contig Sequence (9139 bp)

>contig_67110 9139 assembly3_WGSMorex_rbca.fasta
GCTCCATGGGTATGTGGATATCCAATGGGTTTGGGCATGGGCATAATTTGTGCCCATGGA
TACTTTGATGGATGGGCAGAGGGTAGGAATATGGGTCATGGGTTGGATTTGGACCAGCTC
CACCCGCTCCAAACCCGACCCATTGCCATCTTACTCATCTTTCTTTTTTCTTTTTCTTCT
ATTTTATTCTTGGATAAGGCCTATACCAATAAACTAAGGACGACAAATAAGATGATTCAA
ACCAATTTTGCAAAAAAAAACATAGACTTGCAGGTCAAATTTGAATTATATACAGTAAAT
ACCTAGAAATGCAGTTAATGTTTTAGTTTAGCAAACGGACCCCAAAAAATGCCAAATTTT
GTCATGTGTCATTTAATAGTGTATGTTGAGTGTAGAAACTTTAATGAACCCAACTGATGA
AGGAACACTATTTTACCATCAAATATGGCTCGCTCCCTCTCGAAACACACATTCCGTCTC
ACAGGTGGTCCAGATTCTAAGCTCAACAGATGAAGAAACCACTGCTTTTTACCTTCGAAC
CTAACTCGTTCCCTCTCGAAACCTACATTCTTCCTTGGAGATTGTCTGATTTCTAAGCAT
TTATGAAACATTCTCAATTCTGTACCATAATATATAGATTGTATATGAGGGCATCAAGGC
AAGTTTCATATTTTTCTGACTTCATTTGCATTTTTCATAACTTAAATAACCCGATAACCT
CCATGTTCGAGGCCGGGTTCTGGCACCGAGATATTTGGTAGTCTTTTCCTTTTATTTAAT
AAGGCCAAAACATAGACTTCAAAGATAGGATGTTAAACCTAATTTAGCAAAAATAAAAAT
CATGCACTTACCATACAAATTTGAATTATATACACTAAATGCCTAGAAATGCAATTAATG
CCTTAAATATAGTAAACAGATCCCAAAAAAGTCAAATTCTACCATGTGTCAGGCAATGGT
GTAAATGTGATCTCGAGGACCCCGAAAAACTCGAGACCGCTCTCCGTCCATATTTAGGAC
GGTTAGGGCGATTTTTAAGAAATAAAAACCTTCTGTCGATTTATCCACACTTCCATGATT
TCTAGAGGAGAGCTAACTGCTTGCTGGCTGGGAGCTGTATGAGTGGTAACGTCCACATAC
GACCCGGTGAGAAGGTGGACGGAAATGGCCTTGTTGTACCTCACTCCAATCTTCAATGGC
ATCTGCTCTTTTTTGTAGGAGAGTATGCCAACATCATCTTAATGAGGTGCAGGGCTTTGC
ATCTGACATTCGTTGGGCTTTCCTCTGTAGGAGCCCACGTCCCATTCAAGCTCAACCTAT
AAAACAATGGTCACTTTCCCTTAGAACCCAACACGTGCCCTCTTGAAATCTAGATTTTCT
TGAAGATTGTATGGTCTTTAAATAGTCCAAGTGATAATTTTTTAAAACCTTTCAAAATTT
GTTATCACAACATATTTAAACCATATGAGGGAACAATGCTAATCATGTTTTATTTTCAGA
GTTCATTTGTATTTTTCACAATTATAGTAGCAATATTCTCCATGTTGAAAGTCGAGTCCT
GCACATAGATTTTTGCACCTCCTTCATTTTCTTCAATAAGGCATAAACATAGACTAAAGA
CCATAAATAAATAAAAATTAACCCGATTTTGCAAAACATTTCATGAATTTGCAGTACAAA
TTTGACTTATTTGTTAGTCTCAGAAAATATTTTTTTATAAGAGTAGTTAAGGAGGTCATG
CCGATGTCCTGCACGTAAGTCTTGTTTTCTGGTCGATCGATTTGTACACTGTGCACTAGT
TGGCACCTTGTTTGTGCTTAATTCTTCTCTAGATATGATGTTTGAAACAACAAGAAAGAA
GCAGGTTGTGGACGTGATGTTTCTTAGCCCGAGCTCATATGATATTGGATGAACAGAAAA
TTTGTTAGTGTTTGCCACAAAAATAATTCAGCATTTCTTGAATATGTTATTTTTCGAATT
TCGTACTTTCCGCAAGTTATTTGCTTCCTTTTCTTTCCACAAAAATAACACGTCTGCTTC
CGTCCCTCCGTCTCATAATATAAATAGGGAAAACATCCTGGTCAGCCGGCGGATTCAGTT
CGAGGCATCCGTCGCCTCTGGCGCGCAACGCGTGTCCTTTCTGGACCCATGCACCGCACT
ACATCTTTCTACCTTATCTGACTTGAGTTGCTCGTTTTTTATTCAAAACTGACCCTGTCT
TCTCTCTGATCTCTCTCCGCCGTCTCTCGTTCCGGTCACGGGTAGCCAGCAACATGCTCA
TGGAGAGGTTGCTTGAATTCTGTAACATCGTTCCTGTTGCGAAAATCCTCTAGCAACATC
ATCTATGTTGTAAAAAAAGATTAGACGGATTTTTTTCTGCAACACCACTTTTGTTGCAAA
AATCTTCCCGCAACATCATCTATGTTGCAAAAAAAAGTTTAGACGAAAAAAAAAATCTGC
AACACCACCTTTGTTGCAAAAATCCTCCCGCAACGTCATCTATGTTGCAAAAATAGTAAA
GACGAGAACAAAAAATTCTGCAACACCATCTCCGTTTTGTAAATGTTTCTGCAACAAGAT
GTTTGTTGCAAACACAACAGAGTCCAACACTTCAATGGTTTCGCAACAAAGCTGTTGTTG
CATAGCGAGCTACGCAACATCTATCTTGTTGCATTTTGCGACGTGCACCTTAGGAGAGAT
CTGCCGGCTGTTTGTGTCACAATCCAACGGTGAAGGAGGTGGATGATGTTTTCAATTCAT
CTACCGGCGGATGCGTAGCAACCCCCATATAAATAACATAAGGCGATTTTAACACTAAGA
CAAAGGGAGTACTAGCTAGTGGTATATATCCCACATCTGCTTCTTCTATTCCCGGATCGT
CTGAAGTATCTGATGCAGCGTGGGAGCAAATCTGGTGACGTTGAGTCTAATGTCCTGCTC
CGCCCAGAAGTACTGCTTTGCACCCTGCCATCCCTGCTTGTGTATCGAGTCCGGGTCACG
TACCGCCGGGTGGTCCTTGCCGTACTTCTCGTAGAGCGTGCTCTCCTCGGCGGCGATGAA
GTACTCAACGTGTTGCAACATCACCTTCATGGCCTGCGCTCCATAGTAATGCATGGCCTC
GCGCTCCAGGCCCAACCCCACCACCTGCAGGACGACAGCGTTGGTGCGCAGGAAGAAGAA
GTTTGTGAGCGCGGCCCCGTGCACGCCCATCAGCACGTCGGACGAGTCCAGCATCCGGGC
GAACTCCTCGAGGCTCATGTCACGGTGCGGCTCCACGACCAGCACCTCAAACCCGGCTGC
CTGCACCGCCGCGGTGATCTCCGGAAGGTTGACGAACTTCCTACTCATGCCACGATTGAT
GAGCAAGAGCCGCGGCTTTTGTTTTTCGGTGACAGTAGTGTTGTCATCAGTTGAGTTCTT
CTTATTGGCTTCCTTGTATGGGATTCCTATGCCTTTTGATGGGAGCGAGAAGATGTCCCG
GATGTACAGGCGGAAGTCCAGCAATGTGTAGTTGCGCGGCGTGCGGGCCGGGTCGATGTC
GAGGTCGCCGTGGCTGTGAAGGCCGACTACGATGTGCGGGTAGCACCGGACGCCGGAGTC
CTTGTTGAAGTCGACGATGTCGTAGCGTGACAGGTTGGTGAGGATGAGGCGGTATTTCTC
CACGAACCACGGCTGGAGCTCGGTGACAAGGAACTGGACCTCGCCGTCGTAGGCGCGGGC
GGTGATGAAGAGCGGGATCAGGACGTCGCTCAAGTCGTGCCATGGGTTGCCAATGATCCC
ATTCATGGCAAACACGATGGCCGGGACATCGTGTTTGGAGGTGCACTCCGGCGCCACCAG
GCTCTGGGCGGCGCTCAGGGTCTTGACCTTCACCTCCATGATGTCCTCCAGGTACTTGCG
CGACTGGTCTTTGATGGCCCATTCCGGGCCGTCTGCGCCGCGCTCGTCGACAGGAGGGAC
ATAGAGCACGGTACGGTTCGTACCAATGGCACGGGCGTCACCGGAGATCTCGCAGATGTC
GTATCTTGGGTCAGAGAGGTCGCAGATGGGCTTGCTTGGTGCACCTGCATGCATGCGGCC
GATTCAGATGATGAATGAAATGACATTCGAGCGAAGCAAGCTAAGCGCAGCTAACCATGC
TTGACGTCTTGATCGAGTTCTTGCCGGATGAGCTCTGCCTGCATTTTGTCACTAGCATCA
TTTTTTACTGTTTGGCCTTCCTTCTTGGTTGCGTCGTCCTTCTGCCCGTTCTCTATGTCA
TGTAGTGCAGCTGTCAATGTTAATATACATCAACAAAATCAAACATGACTGATTTGGCCT
TAGGCATTTATTTACTATGAATTTGATAGAACCATATTCGTACACATATCTGCTAACTAC
TCCCTCTGTCCCATAATATAGAAGCATTTTGGGAGCAATATTGTTACATATACGTGATTT
ATTAACGTAAGTTACACAGGGGACAATCATTAGTAGATAGGGGCGCGTGGGCCCACCCTG
AAATCAGGGGTAAATTTTAAGGCTGGTCGTAATGAGAGTATCATAGCTAGTATCATGCAT
GCCAACTAGACAACTTTGATGANGTTGCATAGAATTAAATGAAGAAAGAAAGGGTTGAGT
ATCATATTATGATACCGTATCATATTAAATGTTGTTCTACTTTGTGTCTTGCGTATCAAT
AAATTACCTATTCTATAATACTAACATATGATATTATGCATTACAGGTGTAGTATCATAG
AGTAGTATCATATGCATGATACTAGGATATGATACTCTGCATTACAACCAGCCTAATTAG
TGGAGAAGGAAGATGTGGAAGGTTACGTAGAATTCATATAGAAATGTAGCATTTTTGCCA
TTTTTGACACTACTATAATGTCAAAAATGTTTTTATATTATGAGATTGATAGAGTACATA
ATAATATGACCCCGTGTGCAGTTGTAATTAATATACCTTGAGTAGAATTGTTAGGCACCG
ACGACGCTGGTGACGCTGGAGGAGAAGAGGTCCTCGCATTTTGCTCACCAGTTGGGGACT
GAATAATGACTACACACATAAAAAGAAGCAAGCATATTAATAAAAAAGTAAATAACGTAT
ATAAATATACCACTTACAAATTTTAAAGATAGTGTGATCATGTTTTGAGACTAGGAATAT
TGTGAATAAATCATGTAGCTTATTTGGTAGTACTGCTCAATGTTAACTTTCAATTAGTAC
TCCCTTTATAAAGTAATATAAAACTTTATATATCACTAGTTTAGGACCTGTTTGAAACCA
CCCAGATTATATAATTTAGTTTTTACAATCTATTATGTCTTCAAACAAGACAAATTATGG
TGTAGATTATAGAAACTAGATGGACAGATTATTAAAATCTTATAATCTACTCTACCCCAG
CTAAAATCATATTATGGATTGTTAATGACCCATTACCCTTGTAAAGTTGAAGATAATTAC
ATTTCTGCCACCACCACCTTCCTCTTTTTTTAAAAACCAGAGGACAGATGGGTCATTATG
CAATATAAAATTTGGATTATAGTTTATATAATCTGGCCTCCAAACATGCTTACCTAGATT
ATTTTTATAAACCATATTATATAATCTATCTTTATAATCCAGACTATTATAATCTATTAT
GGTTCCAAACAGGGCCTTAGTGATCTAAAAGTTCTTATGTTACTTTACAAAACCAGGTAA
GTATGGATTGGGAGCGGATTCTAAGGGAAACACCGGAAAACTACACACCACACAAATACC
GGCCCGCGGCGCATACACAACTTGTGTGAGAATAATGTACAGAAAGAGAAAGTTATTGGC
AGGGAGAAATCAATACGTCCAAGTTCTAAAGGAAATAAACATGGAGAGAAAAGTGGAGAT
TGGATTAGACGCGACTATTCTGATCCCGAGCTCATGTGAGCTCGGGTGAACAATTTTGAT
AGCTTGTAGAATTTCATCATCAGATGACATTCGTGAAAAAATTGACAAGGAAACAAAATC
GATGTTCTAAAACATTATTTTCAAATGCATTTTGGAGCATCGGTTTTGTTTTTTCGGTCA
CGTGTTTCACGAACGTCATTTCAAGATGAAATTTTGCGAGCTATCAAAACATTTTTTAAT
GTTTCACACAAAAAAATCAGAAATTTTTAAATTTTACTATTCATCCGAGCTCATACGACC
TCATGATTAGAACAACACGTTCGGGGTCAGACCTGAATCCTAGTGCCCTTAATTGAACAA
AGACCCTTTTACTACTACATATGAAAATGGAGGGGGTACTATCTAGTACTTCCTTCGTCC
CTAAATATAAGATCTTTTAGATAATAACTAAGAAAGTACTATTTTTCATGACTCATATAA
TATAAATAATTTAGTGTAATATATAGTACTTCCTTCGTAAAGAAACATAAAAACATTTAG
ATCACTACTTTAGGAATCTAACGCTCTTATATTTATTTATAGAGGAAGTATCAAGTCAGT
TGGTGCTCCCAGGATAGTATCATGATATATATGATGATACTAGCGTCATATGTTTCCTTA
TCAAATATTACGAAGTAACATGCTTAGTACTCCCTCCGTTTTTAAATATTTGTTTTTTTA
GAGATTTTGCTATGGACTATGTACGGAAGTTCATCCATTTTGCTCCTTATGTAGTCCGTA
GTTGAATCTTTAAAAAGACAAATATTTAGAAACGGAGGGAGTACTAGTTGAGGTTGCATT
ATATACCTACGATAGCTCACTACGAAAGATCCAACAAAAGAAGATTACCAGTACCAAGTA
GTACTAACCATTGCCATTCGTCGGCTGGAACGGGCCAAACACCACGGTGGTGTGAAGCAC
GAGGATGACGACGAGAGCGAACAGGAACCCAACCACGGCCTGCCGGCGGCGAGCCAATGT
TTTCGCCACGCCCTTCACCGCCGCCGCCGGCGAGTTGGCAGCCATATATCCCGTCGCCGT
CCTGGCCGGCCGACGGTCGCTTCTCCTAATCTCCTTCCGTCTCTTCTCTCCCTCGGCTCT
AGAGCTACCTTCTAAATTTGTCCACGGAGTAGCATTCGTCTGTGGCGCATATGTATGTAT
ACTTACACACACACACACAGCCTAGTGATCTCCATGTGGAGTCCACGTAGGGGATTTAGT
TAGTAGGGCTTGGGCGGTGAGCCCGCATGGATCCACTCTTACACCAAGCTTCACTCTTAC
GAATGCAAGTCTCTGCGAGTCTCTGGCTTATCAACGACTTGGTTCGTATGATATAGATAG
AATAGTACTACTACACGATTAGTATGGCAGTGGGCTCGCTGTTCGACGATCAGCGCAGTT
AATTGCCATTACACAGGTGATGTGACTTGCTTTTAGACACCCGAGGCAGTCAACCCATCA
AACACGCCATTAATGGGACATGAGAACCCGAGGCCATCGCCACTGGTGTGGTGAGTGGTG
ACCAACGTGCGCCGATTGGAAACTCATGTGTGCAGCTGACCAGATGTGGTGCGGACTGGT
GTAGAAGGATCTGGCACCACACCTCGGGCGTTGGGTCGGTTTGGATGATTCTGACTTGCC
ATGACCAAAGGCAAATGAATTTGAGCTCTGCAGTTTGCTGGAGAACAGAAAAATGATTCA
TGCATTCGCTTGGATTTTTCATGTGAGAGCATGACTGAAAAAACGTCTAGATACTCCATT
TGCGTGTCATCTATTTTTGACGGAAGGAGTAGTATTTAATGAATCTGAACCGACAATGAG
CGAGAAATTGAAAGGTGCACATGGTATCAATAGTTCAGTTGCAAACACTTGATTTCCAGA
GGAAATCCTTTTGACTGAAATAAATCGACACATACAACCAGTTAAATTTGTTTCTGCAAA
TGGTAAGGGGAAGATAATCATACAAGAACCATGAACAAGCAGAAAATTAGGAACTGGTGC
AAGTATGGACGCTCCAGACAATCAATTAAAAAAGCAGCATGTGAAGGGAGGGGAGAACAA
TACGGTTAGATGTGTATAGCCTCTCAGGATATATCTTCATTGTATCGGAGATTTTTTTTA
TCTTTTACCATATGGATATATACTCACCATTGTCCCATGTGAATGTTAGTTGCTCATTTC
TAACATGGTATCAGATGCTTAGGTTCTCTTCCACCCCGCATGTTGCAGCTCCATGATTTC
TGCCTCCATCGTCGTCGCCGGCTCCGCACTTGCTCGTCTCTGTCCTGTTTTCCTACCGTC
GCCAGCCCCAAGTCCAGCCCCGCCCCGAATACGCCGCTGCCGGTCGTTTCGTCACCCGGC
CGCGCTCGAAATCCACCGCCGCCGGCTCCTCCTCGCCCGGCGCCGCCCGGATCTGCCACC
ACCGGCTGCTCCTCGCCCGACCTCGCCTCGGCTACGTTGCCGCTGGTGCTGCCTCCGGCT
GGCGCTCTTCCTCCTCGCCCAACGCCGCGGCTGATGCTTCCTACAGCAGTCGTCCGGTCT
GCGGCTGCTGCAAGCGACCGTCTGGCCTGCTTCCGGTGTTGGCATAATCCATGATGTATG
GTTCCATGTCCGGCTCGGACTGGAAACAATTACCGACTAGGTTTAGTATTAGGCTAGTTT
GCTAATATATATATGTACCTATGTAACCCCTGTGTATTAAAAACTCAGATCAAAGCAATA
CAATCAAAGGCTCGATACGAGCCTCTGGCAATCAACTCGCGTCAAGTATGTTTTAGCCTC
GTGTGTTCCGGTGACTCCATCGAAGCTAGCTAGCCAGAATAAAATCCATCCAGCTACTAG
CCTGCTTGCTTGCTCTTTGTGCCGCAGCGTACGTGCAAGTGTTAGTACTACCTGAAGTAT
CCATCCACCAGGTAGCCTGCTTGCTTGCTCTTTGTGCTGCAGCGTATCAGATCGGCGGAT
CGCTGCAGCGACGACGGATCAGTGCCAACAATTGGTATCTAGAGCTTGGTTTATTGGCGT
GATCTTCGAAAAGTAATTGAAGAATCATGTCGAACCCGGGCAAGAAGATCGTTGTGGCAA
GAGCTAAAGCACCGATGCCGATGGTTGGGGGGTCACAATTCCCCCGGTTGGATCGAGAGG
ACTACGCACTATGGGCGATGAACATGGAGGTCGCGATGGAGGGAGCGGAGTTATGGGAAG
CTGTCGATCCCGGCGGTGC