morexGenes - Barley RNA-seq Database

Contig contig_67083

Source Contig contig_67083

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_67083 (2357 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_67083

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_75078	1	1359 bp	AK354350	Available	Available	None

CDS Structure of MLOC_75078

Contig Sequence (2357 bp)

>contig_67083 2357 assembly3_WGSMorex_rbca.fasta
TAGGTTAGGATCTCTTTCTATCTCCTTGTGTTTAAACTGTAGATAAGATAGATTGATCTT
AAACCTCTCTTGATGTATATCTCTTCGGCTTATGCCCCTATATAAACATGCACGCGTCCC
TGCTAAGAGCATACGCTTCCAGCCTTTTCCACATCGCAATGTTTTTCAGATGGACCTCTC
AATCAATGTGTGTGTGAGTGAGTAGTAACCCGGCCATCCAATAAATCAAGCATTTTAAAT
TACACAAATATGAGTTAAGCTTTCTACCGGGCTATAAAAAATTCTCAACAGAACAAAGAA
AAATATAAATTACTTCAGTTCTTTTCTGGTGTGCTCTCAACCTGAAATTTTAACTACATG
TTCATCCAAGGAAACTTATACACACTGTGACCTGGAGCTTTGTTAGCCAGAAACATTATT
TTTACTAAACTGAATTTCGAATGTCATAAGAAAAATGGAGGAACTGGTTAAAGCAATATC
TACTGGGCGCAGGCCCCACTGAGGATTTACTACTAACGAACAACAGTTAATTCCCTATAA
GACTATACCAATCTGAATCAGCATACAGAGAACATGCATATCCAATGCACTAGACATTCA
AGTTTGTGTGAAGCAAACAAAGTACCAGAGTTGTACTCCTGGGGCTGCAGCTGCTTTGCA
CGAGCCTTATCAACCAGCTCCTTCCATTTCCTTGACAGTGAATAAATATCAAGCTGCACA
AACCAACAGTTCTCAATTAACTCAGACAAAAGCATCAGTTTAAACATCAACCTATAGAAA
CAATTAACAAATACACAAAACATTCAACCTTATCAGCATCCTGGAGCACGGGGGTTATCA
ATCCACCATCGATGGCCACCGCCACAGCAATGTTGATGCTACTGTTGTAAGTAAAGCTCT
GCCCATCTCTGCAGCTGGAGTTCACCACAGGATGCTGCACCAGCGCCATCGCTGTAGCCT
TTGCCAGCAGCGCTGTCATTGTCACCCCCTTTGCCTTAATCTGCAAAAGGTTCACTCAAT
TATCCAGCTATCTCACAGCATACAGCTAACATAAGGGTGGTAAGCACTGAACAGAGCACT
AAACACTTACTTTTTTGTAGAGTGCATCGAGAGCATCGGTTGTGATGGTGTACCCGACCC
TGAACGCCGGCACGGCAAGGCTCTCCACCATGTTCTTGCTCACAGCGCCCTGCATTGTGG
TGAATGGCACCGTGGATCCCAATGGAACATCCGGTCGAGCAGCTGCCAGTGGCGCCGCTT
TCTTGGGCGCAGCTGCCGCAGCCTCTACGTCCTTCGCCACAACTCTCCCCCCTGGGCCAG
AGCCGGTGACTGCGAAGAGATCAACGCTGAGCTCCTTTGCGAGCTTCTTGGCGTAAGGCG
AGGCAACCACCCGCGCTCCGCCCTGTGTGGCCGATGAAGGGGGTGCTGGCGCGGAGACTG
CTACGGGCGCCGGAGGAGGAGGCGGCGGCGGAGCAGGGGACGCTTCTTGGGCGACGGTTT
CCTGGGGAGCCGGCGGCGAGGCGGCGGAGGAGGAGAAGTTGGCGGCCTGCGACCGGGCGA
GCGGGATCTCCTCCTCGGACTCGGCGAGGAGCGCGATGGCGGAGCCGACGGGCGCGGACT
CTCCCGCGGGGACTAGTACGGCGGCGAGGAAGCCGTCGTGGAAGGTCTCGACATCCATGT
CGGCCTTATCAGACTCCACAACAACAACAGGGTCGCCCTTGGCGAGGCGGTCCCCCTCGG
CAGCGTTCCAGGCGACGATCTTGCCCTCCGTCATGGTGGAACTGAGGGCCGGCATGAAGA
TCTCCCGGATCTTCGCCTCAACCCGGCACGCGCGCCGGCGCCGCGGCACGGCGTGCCCGC
CGCCGCGTTGGCGGAGCAGGGACGCCGATGGCAGCAGCGTGGAGTGGAGGTGCAGGAAAC
CGGCCATTGCAGGGACGGGAGGGGTAGGAGGAGGGAAAGAGGGTAATAAGGCTTGAGATA
GTTGGCCTTTGGTTCCCTTGCTGTTGTTGTTGCTGCCGCTGCTGCTGCCGCCTTGGGAGT
ATCGGAGGCGGGGCGGATTAGCCGAGGAGGACGATGCTGGAGGCTTGGGCTGGTCGCTGT
TGCCTCCGTGCTTTGGGTTTTCCTTCAATCTTATTAGCAACAAACCCAAATGCCATGTTG
CCATCAAATTCCTTCAAAAAAAAAGTTTAACATAGCTTAAAAAAAAGTAATAACGCCATT
GTTATAGGAAAAATAAGTAATAACGCCATTGGTACATAAAATTGCGCGGTATATCTATAT
ATATATATACTAGCAAAAGGGTCCGTGCGTTGCAACGGGAGAAAAAAAATACCACACGCT
TTTAATCTTTTTATAAT