Contig Data
morexGenes
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Map Locations of contig_67034 (5377 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_67034

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75051 1 975 bp MLOC_75051.1 Available Available None
MLOC_75052 1 991 bp MLOC_75052.1 Available Available LOC_Os06g15420.1, FRAME:+3, EVALUE:3e-38, 13106.m01705 protein asparagine synthetase, putative, expressed





CDS Structure of MLOC_75051






CDS Structure of MLOC_75052






Contig Sequence (5377 bp)

>contig_67034 5377 assembly3_WGSMorex_rbca.fasta
CAGCTGGCCACCGAGCGCCCTGGGCCCAGGACTTTGGTCGCGGTTCGTCTTCCGAACCGC
GACTAAAGAATTCATTAGTCGCGGTTCCTACAGTTTCGCGACTTATGGGGCTGGACGGAA
GCCTCTTTTTCTACCAGTGGTAGCGTATCTCCACCCATAGGTGACCGCAGGGTTTTATAG
ATGAGGCGAACAACTTGCCGTGGCATACAAGTTGGGAATGATAGCTAGGATACGTTCGTT
ACAAGGAGATCGAGGGGATCGAGAGAGAGATGCTAACATAATACAGGAGAGAGAGAGAAA
AATCTCTAGGACTCTACTCTATCTACTCTATCTTATGTTTAACATGTCCTATGTACCACC
TTTCATGCGCATGCAAATCATTCACATCACCAAACACATTCAATCATTCGACTTTCCATC
ACATGCATGCTCTTCACATTATCAAGCGCTCATGCAAGCATTTAACTTTTTTTCACTTCC
TATCACATGCAAGCCCTTCCCATCTTCAAAGAACATAAACGTCCTCCTCATCGTTAGTTT
TTATTTTTATTTTTATTTTTATTTTCCAACAATAACAAAGTTTTTTTGAAACGGACGCAA
AACATTTGCCTCATCGATTAATTAAAAAGAAAATAGTTGCTCAGTTAATTTATGAAAAAC
CGGACCAAAACCGATACATACTTCCACATACGGAATACTCGCAAAGAAGAAAACGCCAAC
ACCGCTCAAACAACCCTCTAAACACGAAACAACTGCAACACTCAATGCTTGTAGAACACA
ATAAAACTCCTAACGAGCACACCGACGAAAACCGATCACACTCCATCATGAAATCACGGA
CGCCTTTTGGATGACATCACACTTCTTGCTTTTGTTCTTCAATTTATCCTTGCTTGGCTT
CTTCTTCAGAGGGCCACTTATCTTGCTAGATGTTGGCTGATCAGCCAGCCATTTGTCAAG
AAATTCATAAAACTCTTTGAATTTTGTAGTGTCGTTGTCGTCAATCAACAAGCAAGAAGG
ACCAGTCATCAACACACTATGTGCATCGACATGCTCAACAAAAGGAATCACCGACATGAC
CTCATCGACAATAGGAACCGCTACGACGGTGGACTCAGGCACCTCCGGTTGCACAAATGA
CCTTGACGACACATGCCCCTCACACGAGGCTACCGATGAGACCACCACCAAATGCTCCAC
GGAGAGAGGCGAAGCACGGCTAAAACATAGATCTCGTAGCTAGGGCATGACCTGCAGCAC
TGGAGTCTCGAGCATGACGACGGACTTGCACGAGAGTGACGATGAACCATTTCCAACATG
AGGGGAGAAACATCCATATAACTCTTGCATCCCTTCCTCTATGGATCTAACATCTTCCGC
ACCAGAAGGGCAGGACGCCGGAGTGGTCTGTGACATGGGCAGGAAGCCGGAGTGGTCTGC
GACATAAGCGGCGCAAGGGAGAGCTTGGTAAGAGCAGCCTTCGCGTGCTCCAAAAAACTT
CCAACCCGTACCAGTCAATTTTGCAGCAGTGTTGTCTAATTAGCCAGAACGGAATGCAAC
ATCACATCAGGCGGGGTTGCTGGGCGAACAAATAGCCTCAACCTTTTCTTTGTATTTCTC
CACACCGGTTCAAATGAAACACAACTGATTACATGAAAGTCTTATAGCCCAGCCAACCCA
ACGCCTGAGCAACCCACTCCAGCGACTTACGCACACGCACGCGTAAACTCCACGCCGGGC
TTCCCTCACATGATTCGCATGACTCAACCTACTTCTTTGTCAGCCACTCGCTCCTTCATA
AGACCCGGTCAAACATCGAGGCATCTAGGCTACACATACTAAAAGACTAACAACACATGC
AACTTCACATCCGCTGCTATAGGCCTACTACTACCACCACGAGGACACACACGCTACACA
CATACATACACGACCATGACCCAGCCTACGGACCCAACCAGACGCACCAACACCGGTCGA
CGTCGATCGCACCGTGCTCTGTCACGACTTATTCCTAACACCCCGCCAGCAGCTTGGACA
GAGCGGCTCAGCGCCGACTGCGGCCCCGGGGCCCGATCCAGATGGGATCGAGCAGCGGAC
AGGGCTGGTTGCAGGACGACGCACCGTGCGCAGCCAGCAGACATCTCAGCTGGAGGCGGC
GACAGCATGCCCGCCGGGGCGCGAAGCAGCGCTGGGTTGGCGGACGGGCAGCTGCCGATG
TAGACGGAAGGGACGATGCGTGGTCGCCAGGACGCAGCTCCCACACCCGGTTCCTAGTAG
GAGGGAAGGGGAGATCAGACGACGTGGAGGCCGGATCTGGGAGCGGCAGACGAGGGGGTG
GCCGGAGCAGAGAGATCCGGCCGCCGCGGCCGCGCGCTCACGCGGTGACGACTACAGTCG
CGAGAGCCATTTGCAGGTCGTGTTTCAGCAACAGGTATAGTCTCCCCCCCCCACCCCACC
CCACACCAACAATAAATAATTGAAATTTAATGTCATAAGACAATATAACATGTCTTCATC
CTTCATTTATTTTTCAGCACAGTACTGACGCATGTGGTTATATATACTCACATACATTTA
TTTTTATAAACGCATACAGACACATCATACCTTTATAAACATCTTTTAAAAATTAAGCCG
ACACATTATCTTAAGATTAATAAAGTCATCACACACGTTATTATAAGGGCCATGATAACG
TCCACACGTGTGGGTGTTAAGGGTGTTGCTCACATGTTCTGTGTGGTATGTAAGGAAAAC
AGCCCACACGTCTATGTGTGGACAAAACAGTTAACGCCCACACTGCATGCATGCATGTGG
ATATCTTTTTGAAGTTTTAATTTTTAAAATATTCTATCTTCTAAATAAAAAAATCTGATT
GAAGATCCGTTTTTATCATTAAATCCATCGCAATGGGATCTTCGAAACTAGATCTCATAT
TAATATGTTTCGATGGAAAAAAATCGGACAACAGTTGCCATGCACACTGTAGTTGCCATG
ATATGTTTCAGCTATTTTTTTCTACATTTAAAATTAAATTTTAACCTATTATAAAACAGA
GAATTAAAAAACTAAACTTGCCATGAATCATAAACTAAAATCAAAATGATTAATTAATAA
AAATTGCCGTAAAAAGTAGTTAAAAAATTGTAGCGGTAGCTCTAAATCTAGAAAAAAAAT
AGATAAAACATGTCATTGTAACTTTAGTAAACACTATGACAACTACAGTGTAAACATCAT
GACAATTTTTGGTCAAAAAATATTCATCGAGCATGGTCAAAATTCAAAAATGCCATGATC
TACAAACTAAATTTACCGTGATGGATTAGTAAAAATTGTCATGAGCCATGCAATAAATTT
ATTGTAGTTAATTACTAAAAATCACCGTAAAAATAGTTGAAAATATAACATAGCTTTAAA
TCTAGAAAACAAATAGATACAATATGACATGGCAATTGTAATGTAAACACTACGGTAACT
ACAGTGTAACATCATGACAATTGTTGCAAAAAAAAATCATCAAAATATATTAACATGGAA
TTTAGTTTTGAAGATCTCGTCGGAACGGATTTAATGATGAAAATAAATTTTTAACTGAAT
TTTTTAATTAGAAGATAAAAAAAATTAAGCCGGAAATCAAAAAGGTTTCTCTTGAGATAG
AAGTGGGCGTGTGAGCGAAGTGGTTAAACCCCACACACCAGCTCAGTCCTACGTGATACA
AAAAAATGCCAAAAAATTCTAAGATTAATGTAAAGCACAAAACGAACGCAGATCCATATA
TTAGGGCGATTTGCAAACGTCCACACGTATGGACGTTATTTTTTTATATAATCGATAAAA
ACATCTCCTTCTAATGAACATACATCTTTATAAAAAATGTAAAATAAACGTAGGAAAATA
CAAACATCAATGTTAAGTCTACGATTGAAACTCCGGGCAGGAGTACACCGTCCTAACTTC
ACACTTCTAGGCTGAAAAAGGTGCGGTGCTATTCTCACACACCATTTTATTCATTACTAA
AAAAGTTCAAAACAACGAGCGGGTCGTTATCTACCTAATTTAAAACCGGAGGCTGTTTTC
TAAAAATAGAAAGCGTCGAGGATTGATTCGATACCGCTAGCTGCTAATGGATGATGCGAG
AAGAGAAACACGTGGAGTACATGCATGGACATGTAACAGGAAGAAACGCACGCATGCAAG
CAAGGTGCCGACGGATGATGGTAGAAGTGGACAAACGAAGCCATGGCCTGATGTGGTGCG
GTGGCCACAAGAAAATCCGACGAGGCCGTGCATGTACGACGTGTAGCACGCCATCTCCGG
CCAGGCATGAGGCATCTATCTATCTAATCTACCTACAAGTAGAGCCAAGCCTTTGCTGCA
CAGCTTCATGCACAATTCAGATCGACTACGTACCTCGGTGTTGGCTGTAGACAACGATCG
ACGACGACGATATCCAGCGAAGCAGAGGAAAGCATAGCAGTCTGAGCATATCATGTGCGG
CATACTGGCGGTGCTGGGGTGCGGCGATGAGTCGCAGGGGAAGAGGGTGCATGTGCTCGA
GCTCTCGCGCAGGCTCAAGCACCGCGGCCCGGACTGGAGCGGCCTGCACCAGGTCGCCGA
CAACTACCTCTGCCACCAGCGCCTCGCCATCATCGACCCGGCCTCCGGCGACCAGCCGCT
CTACAACGAGGACAAGTCCGTTGCTGTTGCCGTCAACGGGGAGATCTACAACCATGAGGA
GCTCCGGGAACGGCTCCCCGGCCACAGGTTCCGGACCGGAAGTGACTGCGAGGTCATCGC
CCATCTGGTCAGTCACCCACCACACACCAGCATTCTTCTCCTGCTTGATATATTAAACCA
CAGAATTACAATCCACAAATTTAGAACATGTTTGTTAAACACTAAGTATGGTGAATCCGT
AAATTCTACTCCCTCTGTTCCCTTTTAGTAATTTCAGTATGAATAACGAATGTATATAAA
TATATATAAACATACTCCCTTTTCTAAATGTATATAAATTTTAGTAATTTCAGTATTAAT
TACATACGAGTATTTTAGGGTATAGTAATTCATATGTAATCCATAGTAAAATTTCTAAAA
AGAGATATACTACCTCCGGAGGGAGTATTTAGAAAAGAAGAGGGTAGAAGACAAGACAAA
TATACTCCAGATAATCTCTCGAGGTGTGCTTCGGTAGACCCCCTCCACAAAACGTAGAAG
GAACAACATATACCCATCTCGTATTGTACACTACAAGATGTTATACATATACAATACGAG
GTGGATACAATGTAAGATACGTACGGCGGTCTATAGTTCACAATACGAGGTGGATATATG
TTCCCTTCTACTTTTTGTGAGGGGGGGGGGGGGGGGG