Contig Data
morexGenes
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Map Locations of contig_6699 (2858 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_6699

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_75029 2 633 bp MLOC_75029.1 Available Available LOC_Os11g43620.1, FRAME:+1, EVALUE:3e-46, 13111.m04347 protein LSM domain containing protein, expressed
MLOC_75028 1 581 bp MLOC_75028.1 Available Available None





CDS Structure of MLOC_75029






CDS Structure of MLOC_75028






Contig Sequence (2858 bp)

>contig_6699 2858 assembly3_WGSMorex_rbca.fasta
TTACTGAAGTGGCCGCACACAAAAAAATTGTTGCCTCAACGGTGCAATCATCTCTTACAG
AATTAGGCCATGGGTATATGAACATCTATCTACCTATATATCTATCTGTTATCAAAAAGG
AAAACACCCTGATTGGAAAAGAGACATCCCTTAGATCACGCACCACATATATCTGAGTCC
ATGGTCAGTAATTACGCAAGATATATAGTTCAAATTGCACAAATACAACCATCACATTTA
GAACGAACAATAGCCATCAGTACCTACCAGCAATCATCAATCAACTGTTAAAGCATGCAA
GTAGACCATCCTTCATTCAGGATATCGGTGCTATGCCGCTAGAGTTAACATGAGTTCCAG
GACTTCTTGAATGTAATACAGTCACTACGCGTAAAAAAGACGAACTGCAAAATTGTTCTT
TAGCGGTAAACAGCATGCACCAACCTATGAATGATCCGAGTGTACGGCACACAGCTAAGA
GCTCTTGTGGAATTTGGAACTCAGCATGAACATCTAGAAGAAAAGGACAAATGGGGCAGA
AACACCCCTTCATGCTTGGTATGCGACTTCGAGTCCATGCTCAGGAACTCAGCAAATGCA
GTTCAAATTGCACAAATACGATCATCGTGATTCAGACATCAAACCATACATATGCAACGG
CAGGATCAGGACCTATCAGCAATCAGCGATCAGCCGTTTCAAACATGCAAGTTAATCATT
CGTTCATTCAGGATGCAGAACTAGAGTCAACATGAGTTCAATGCATGTACGTAATACAGT
CGAGTAGGCGCAAATGGAGACGAACTAGGAAGTTCTTTTTCAGCATTGAACAGCAAGCAT
CAACCAGGAACAGTTCATGTGCTCTTCAGGCCGCATCTGGAATCTCCGTGTCCACCTCTG
GAACACCTCGGAGGTACATCACATTGTTGCATCTGCATTACGAGCAGCAAAACAGATTAG
TTATGGCATCCGGTCATTAATTTGGATATGTGATGTAAGACTAAAAGCAAACCAGCAACC
ATATGATACTGCCACATCTACAGTACCCTACTGACTTGTCGAGCTATATGAGTGCTACCA
GTTTATATCTTTCATCAAATATCAGATACAGTCTTCAGAAAATGAGACTACGATAGTTTT
AATGTGCAATTTAAAATATATATACTACTGACACATAATAGGGTGTGGTCAAAGATTGAT
GAATGAATTACCTTATCAGTATGTCTCCCAAATTTCCAGAGCATTGTCCATCAATGAATT
CCTCGGTACCACTTAGCTGCAATTCGTTTGAAATATGAGTAACAAAATAGTGTAGTGAAA
TTGACAAAACACTGCGAGTGCCTCCATCGTGTAAAATGGGTAGCCACAGACAATGTGAAC
TTTACCTGCAGATTCATGTAGGAGTCCACTGAAACAAGATAACCTGGGTACAAAAGGAAC
AATTTATGCATTAACACAACTGAGGCATGTACAAGAATGAGACATCTGTAACTAACAAGT
GAGGAAATGCCATTAAAGTACCTTTGTACTCCATGCCCCATTTCAGCTTGACGATGACCA
TCTTCCCTGTTAAGTTTTGTAAGAATGGCTTGGGGTTAACTGGCACAGTCTGCAGCGGAG
TAAAGAAACATGGACAATTAGCAAATTATATCCAACGAAATAAGTCATACAGTACAGAAC
ATATAAGGTCATGTTTTACGAAGATATGTAAAAAAGCTGTTGAATACAGTTAGGGTAATT
TTGCTGCTAACCATGGAAATTGCAACAATATTTTACTACGAGGCATGTCAACCCTACAAC
TTATAAAGAAGCCTAACCAAAGAGAATTCCCTATAACGATGTTCTTGCAGGTACTGCTTT
AAATCAACACAATGCAAATCAAGGAAGCAAGTAACACTAAGTAGTAACCTTAACAGTAAG
GTTCATAAGTCAAATCAACAATTCAGACCAATTAAAATACAGCAACCCAGCAATCCCCCG
GGAAAATAATCTTCCATTCATATTTACTCATGAAAACTACTCCCTTCTGTACCGAAATAA
TTGTAGTTGGGGAGAACTAGACTAGTTGCAGCTAGAGGTAAGACAACACTAAGCTAATAC
AAACATGATAGTACTCATGCCAAACGCTGAATTCGGCAGACAAGTATCAGACACATACAA
TTCTGTTCTGTAACCAAAAGAACATTTTAAAGTAGCATTTTACATTTAGGATTAGTAATA
GCACTACCCCAACCTAATTGCAGTGCTTTGGAGTAGCAGATACAGAGTTTCGCAACTGGT
GATACGACAGACCCGTGGCGGCATTCCAGGAGAAAGGCTACAAAACATTGGCAGCAATTT
CACTGCTCTTGACGGTCTCGCTACCTTCTATCTAGACCCGCAATCTCGACCCATCTAGCC
AAAGACCCAGCAGCAAATGATTCGCCAAAACCTAAACAAAACGGCCAAACTTTCGATAAC
GATCCACAATCTCCACGGCGGGATGCTCGGAGCTTCGGGCAGGCCACGTTTGCAGCCACC
GCGCCATGCGGCATCACCGACTCACACCAGAATGACAGCAGATCGGAAGGGGTTGCTAGC
TCTGACTCCAGGAGGAATTCGATCTCCCGTCGCGCGCTCTCCCAGTGGCCCGCAGGAATC
GACGCCCTACCTACCTACCTACCGACCCCAGCCCCGACACCTCACACAACTAATACTGGC
CAACAGTCCGCCGCAGGTCGCCGTGAGCCTAGGGTCCTCCGCGTATGTATCTGGTAACAT
GCGGCGCGCGGAGAGGCGGGCTATGGGGGCGTGGATGTACAGAGAGCGCGAAATCGTACC
GCCATCGGAGGAGACGGGCTGGCGGCGCGGCCGGCTGG