| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_66983
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_75027 |
1 |
1208 bp |
MLOC_75027.1 |
Available |
Available |
LOC_Os06g48230.1, FRAME:-1, EVALUE:2e-11, 13106.m05128 protein DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed |
| MLOC_75025 |
2 |
3426 bp |
MLOC_75025.1 |
Available |
Available |
LOC_Os07g47700.1, FRAME:+1, EVALUE:4e-154, 13107.m05093 protein NAD dependent epimerase/dehydratase family domain containing protein, expressed |
| MLOC_75026 |
1 |
621 bp |
AK354264 |
Available |
Available |
None |
CDS Structure of MLOC_75027
CDS Structure of MLOC_75025
CDS Structure of MLOC_75026
Contig Sequence (5663 bp)
>contig_66983 5663 assembly3_WGSMorex_rbca.fasta
GGGCGGGGGGGGCGGCCGCGGCGGCGGGACCCCTCGGGCGGCGGGGGGCGGATGGCGTTG
GGGGAGGCCGGCGGGCGGCACGGGCGGGTGCCGCTGGGGCTGAAGCGCAAGGGGCTGCGC
GTGGTGGTGACCGGCGGGGCCGGGTTCGTGGGCAGCCACCTGGTGGACCGGCTGCTGGCG
CGCGGCGATAGCGTGATCGTGGTGGACAACTTCTTCACGGGGCGCAAGGAGAACGTGGCG
CACCACGCCGGGAACCCCAACTTCGAGATGATCCGGCACGACGTCGTCGAGCCGATCCTG
CTGGAGGTGGACCAGATCTACCACCTCGCCTGCCCGGCCTCCCCCGTGCACTACAAGTTC
AACCCCGTCAAGACCATCAAGACCAACGTGGTGGGCACGCTCAACATGCTCGGCCTCGCC
AAGCGCGTCGGCGCCCGCTTCCTCCTCACCAGCACCAGCGAGGTCTACGGCGACCCACTC
CAGCACCCCCAGGTCGAGACCTACTGGGGCAACGTCAACCCCATCGGTACGTACGCCACT
CCTCTCCTCTCCTAACTCCTAACGCCGCCGTGCGCCATCGCCGTACGTCGCCTTCGTCCG
TCCGGTGGAGCACACACGGGATGGGATGGGAAAGAGACGGAAATGCTACCGTCGTCTTCT
CCACTTTCTCAACAGAAGTATTAATTCAACTTGCTATCTGAATTTGATCGGCAGGTGTTC
GGAGCTGCTACGACGAGGGAAAGAGGACGGCGGAAACACTGACCATGGACTACCACCGCG
GCGCCAACCTCGAGGTTCGTGCCCTTTAATCATTCACCACTCACCCAGCAACCTCGACTT
TGCTGGAAACGAAAGCATCATCTTCTCTTTTTTCTTTCCTTTATTAGAAGCAGAAAATAT
AGATTAAGTGCAGCAACTAATGTAATTAAGGTAATTTCGCCTGGTTAATTAACTGACTGT
AACTAATCTTTGTGCTGGCAGGTGAGGATCGCGCGGATCTTCAACACCTACGGGCCGCGC
ATGTGCATCGACGATGGCCGGGTCGTCAGCAACTTTGTCGCCCAGGTAAGAAAGATAACG
GCCCGCTGTAACTAATTACCCATGCACAAGCATGCACGCTTCCACGCACGTAACCTCCCT
TTTCTCCCGCTTTACTTGGGCTTACTCGTAGCTAGGCTTCACTAATCTAGTGTAGTAATA
ACATATTTTTCGATCTAGATCTACGGTAGGCAATAGATTAGTGCCACTGCTGCTGCCTCG
ATCTTGTAATTTGTAAACTTCTATTCCCATGCATCTAGCCGGTGAACCCGCAGCCCCACA
TGCAAGTCTACTGAGTCAGCACCGCTCAATATTACTCCACTTGTAATTTTTCTAGTCATT
CATAATACTTTTAGAAATAAAATCATTCATAATAGCTTGGTCTCTACTGGTTGTTCATTT
GTGACATATATACTACTTCAAAAATAGTCTTTTTTTAAAAAGATTGTGTATTAGTTAAGA
AACAATAGAGTCATTACAGTCACGCGAGGCCAGACGGTCACGCGGGGCGGCACCGCACCG
AGCAACACGCCACCGCGCAAGCGCCAAAAATAGCCTTCAGTGATACTCCATTCGTTCCAT
AATGTAGCGCATACAGACTTTTGGCTATGAGCGTCGTTTATCGTGGATGACAAAACCCCT
TCCCCATATGGTTGTATGCATCTATCGATGCAGAGGCCGGGGCTTAGCCTCCATTTCAAA
AAAAAAAAAAAAAACTTCCCCATTGCCTGGGCTTTTGTTTAGGTAATTTGTACCCGCATG
ATTCATCATTTCTTGCTTCGTTTATCCTCTAGCTTTGCTACCTAGGCTTTGCTAAGGGGG
GACACACACAGCTAGTGGACCAAGTATTCGGTTTGTTGATTCGTCCCAGCGTCCAAATCA
CGTGCTGTTGGGCGTGGCAAAAGCAACGCGGAATTAAACTAAGCTAGATGGATAAACTTT
GACAAGTGGACGCCACGTTCCAACTCTCATTTTCCTAATACCAAGTAGCTGACACGAATC
ACCCCCGCTAGTTAAAACGTATTTTACACCAAACTTGACATGACTCCTTACATGCGAAAG
GTACGTACATGTGTGTGTGGTGGAAGAGATGATAACAAGTTGCTAATGGTGACATTTTGT
CGATTGATGAAGAAACCAGTGATGCTTAGCCAGCGAAAGCGTCGTAGGCATGGCACGATT
CGTCTTCTGATGTTAACAACAAGTTGCTAACGGTGACACTTTATCGATTGATTTATGATG
CAGGCACTGAGGAAGGAGCCCCTGACGGTGTACGGCGACGGCAAGCAGACGAGGAGCTTC
CAGTACGTCTCCGATCTGGTAAGCTCTCCCTCTCACCAACACACGCCACAAGTCAAGACT
CTCTCTCTCACACACACACACACATTGGCTGGTGGCTCTCCATGCTTTTCTCCCCTCTCA
CAAGCTTCGACAGCAGCACGGATTTCATTAATCGATCGGTTGGTTCGTCAACCTTTTTTT
TTTGTTTGGTTCATCAATCGTACAGCTGAAGCTATAAGCTTGGTAGTGGTTCGCTCGTTG
GCCTTGGAACGTTGCATGCAGCCCAGCCTTTTCCACGGCTTCCGCTGAGTCGTTGCTGCC
ATACATGCCAACGCTACGCATGTAGCGAGTGAGTGCGTGCGTACGTGGGTGCTGCTGCTG
TCCGTCCGTCCGTGCTTCCCAACGGCACGCGGCTGTGGCGCTGGCACGTTGGTTAGGTCG
GGGTGGTCCTTCAGGTCCTACTCAAGTACAGAACCACCGAGAGTTGCTAGCGTTTTGGTC
TCGGCTCTGGACCACCCCTCGCCCAGCCTGCTTGACACGGACCGAGTTGGCCCGATCATC
AGCTGGGCCTCCACAGTTTGCATTGGTCCTGCTGGCTAGCTAGTACTGTAGTGTGGTCTC
TCTCTCTCTCTCTCTCTCTCTCTCGCCCGTACCGTACGTTGCAGCTTCGACGGGAAGCAA
TGTCGACGAAACCGCACCAACGAACGGTCGTTAACGGGTGGCGTAACGTACCGTTACCGT
ACGTACACATCGACCTGGACCACGCACGCACACAGGTCACGTAGGTGCTTCCAAACTGGT
TGGTGCACTGTTGCTGCCGACGGACACGTTCGTACGTACGTACGGCGGCGTCAAGTCAGT
ACGTAGCTCTCCATCACCCTTTTTGGCCCCCGGGAACAGCACGATCGATCGTGCCCCTTT
GTCGTTGAACAATGTGTCACGACTGTTCCATCGCGCGAGCGGCACATGCAAAAAGATCAA
CGACCTGTGATCAACCAAGCGTGCCGTGTCGTGTCACTCACGTCCGTGCCGTCGTACGTC
CTTGCCCGGCTTGGTGCCTCTGTGCCATGAGCTCACGACATCCATGGGCGAATCGAATCT
TGTGGTTCTACCAAGTGTTTGTTTGGTGTCTAATGATGCATGAATGTCCTGATGATGGTG
GTGCAGGTTGAGGGGCTGATGAAGCTGATGGAGGGGGAGCACGTGGGGCCGTTCAACCTG
GGGAACCCGGGGGAGTTCACGATGCTGGAGCTGGCCAAGGTGGTGCAGGACACCATCGAC
CCCAACGCAAGGATCGAGTTCCGGGCCAACACCGCCGACGACCCGCACAAGCGCAAGCCG
GACATCACCAAGGCCAAGGAGCTGCTCGGGTGGGAGCCCAAGGTGGCGCTCCGGAACGGC
CTCCCGCTCATGGTCCAGGACTTCCGCACCCGCATCTTCGGCGACCAGAAGCAGCAGCAA
CCCGACGGCGCCGAGTAGTCGTCCCGTCGTCCTCCATCTCCATTCCGTTCGTGTCTCGTC
TTTGTTATGTAGGATTTGTTGAGGGGGGAGGAGAAGGAACGTGTGAGTGACAGTAACAGC
AGGGATACCGGGAATGAATGAATGAAACCGGGGGAATATACACCATCATCATATCCATTA
TCGACTGTGTAGCTTTTCTTTTTAGCGTCTTATATCATGGATTTAGTAGCTAGAAGATGG
ATGCCGAGAGTAAGTCAGTGATCTTAACTGCGACCGCGTGCCCGAAATTCGTTCGCGTTC
TTCTAATTTTACTTTACATCGTGTTGGGAAATTTTCCATGTTGATTTCTACTACTGGTAC
TACAAAGGAGGGCACTCCATGTTTGATGAGATGCAAAACTATCTCGATCGGCCATACAAT
TAGAGACCCGTTTACTGGCTCCTGCATAATACCGTCCCCTTGTTTAAGACTTGTCTGGAC
TTCCTTTCATCGTGAAGGGCGGGAAGGAAATGGCATGCCAACTTTGTCGCCAATGCAAAA
CCTCTAAATGCACGCAACAGCTAGCCTACATTTGATCGCCTGTTGGAGATTTGGTTGAAG
ATATATGGGTGCTCGAAGTTCAGACAAGCAAAGATGCAGTAGAACCAAACCACCAGCATC
ACATTCACACCGTGGTAATAGTTATTACCAAATATAACATCCACGCAGCATCATAATGTA
CACGAACATCGGCAACATACATTAGTCACACGCATAATGCGCTCCGGGGTAACAAGGATA
AGCGGCTGGTGCTACTGAGAAGACGTTGTACCAATCCAGAGTCATATTACCGCCAAAAGA
GTACACAAGGGGGTAGGACGATTAGCACCCAAACGATCACAGGTTCCGTATAGCCCTGAG
TGGAACTACAAGCGCTGGTTATCTGGTAGATGACATGCTTACACCTTTCGGATGAGGAGG
AACAGCCTTTGATCCAGCTCGAGGTTAGCAGCACTTGAAGCATCACCTTTGAGCAACATC
AGGAGGCCACCAAAAGATGCATAGATCTCCCTGGAAAGAGGAAAGAGTGGGCAAAATCAT
TAGAATAGTTGCACGACGGGAATTGGTGAAATCAATTGCTTGGTAAGTAGCCACTAGGTG
TAAGAGTTGTAGGTTGGTTCGAGATGTAAAAATAGGCATTGTGAGAAAATGCCAATGTTC
TTAAAAAAAAATTGTGCCTGTACTCACAGTGTGATTGTGTGATTCACATAATACAACTAG
CCCAGCATGCTTATGGTTCAAAAGTGGGAAAATACCATCAGCGCACTATCAATAAATTCT
GCTTCGGCTGTTCCGTTAGAAAATGGGCTCCTTTGGCAAAGATTTAAGAAATTTTCAAGC
AAGTACAAACTATAAACAAGGAATATCAAATATGTAAAACCAAATCCTTCAATCAGCTCT
TCAAAAGATGGAACATTGCTCTTTGTATGAGTTACACCAAGATCTCCACATGAGAACAGG
CCATGACATTATTTCATTTGAAATGACATTAATTTCAAGGGAAAGCATGTGAGCTTTATC
TTGGACCATGTATCAGGTTACTTATTAACAGTCAAATTAAGCAATCTCAAAACCAAACCC
CTTATCTTGGACCATGTATATAGACCAGGTTACTCAGTAACACTCAAGGAAGCAATCTCA
AACACCATCCCTTATCTTGGGAGTATATACACCAGGCTATTCATGAATACACGCATCAAG
CAATCTCAACACCCCTCCCCCACCCACACAGGATTATATGGACATGCATTAAGAAGCCAG
GGGTCAGCTTTGAGCCCTTATCTTTTTGCCTTTGTGATGGATGAGGTCACAAGGGATATA
CAAGGAGATATCCCATGGTGTAT
