morexGenes - Barley RNA-seq Database

Contig contig_66891

Source Contig contig_66891

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_66891 (2658 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_66891

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_74976	1	1372 bp	AK252164.1	Available	Available	None

CDS Structure of MLOC_74976

Contig Sequence (2658 bp)

>contig_66891 2658 assembly3_WGSMorex_rbca.fasta
GGGGGAGTGGGGTGGGTGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC
CCCCCTGCCATTGGGACAACCCCCTGGGGCAAATCGTCAAACCCCTACTGAAGTGTGGCA
GATACTAGCTTCACTCAAGGGATATCAGTCTTGTTGTAAAACTTGTTATATGCTTCATAA
GCATGGCCTCATTCTGGCAGTCAGGTTAAGAATACCCAGCCCCACTTTGTTCTTTGGGCG
CCACACATTAGACTAGGCAGCACGTGCTTTCCACATACTGAATGACTGAGTCTTTTTATC
TAATGTTAATATAATACAAAAATGTATAACTTCCCCACCATGGAAATATGGTCCATAGTG
AGATAATAACTATGTCAAGCTAGTTTTAATTAGTAGCAGACAACAAAAAAGTGTTGTAGT
AACACCATGTACGGCATGACTAATAACAACTAAGCACTTTCACCATGTCAAATAACAAAT
GCAAAACTATGCTTGTCATTATCTTAACCAATAATATGGGAACCATTTACCTTTTCTTCT
GTATCATCAAATCTTTGTGTCAGCCTGGATGCAATTTCTTCATTCTCAGGTGGAGAATAC
TTTAGATGGTATATTTTCCCAGTTTCAGGATCCAGCCGTCTGCCAACTACCCTTTCAACA
AGAAGTTCATCCGGAACCTACATTGGCGACAGGTGAGCTAATATTCCTACTGAACAAGGA
AAACACTAGTACTTGGATTCTCCATTTCAGAATCTGTTTACTGAATTGCAGCCAGTTTCA
ACACGAGAGAGAAAGCATGACAAATATATGAAAGGTGTATTGCCATATCACAGTGTCAAC
ACTTAGAAAGTACTTAAACTGCGGAATTTGAAAACATGGATCTTATTTATTCTGGAAAGG
GTAAATCATTAGATTTTATTATGTAAGTACCAACAACAAAACTAAATTTATCTCCATTTT
CCCAGGAAAATCCAACATTGGTCACAATGGCAGTGTTTGCCCTGTTCAAACTATTAGTTA
GACTAAGGGTAGCTACCAGCAGCTTTCAAGGTCTAGAGTCAGTGTTCAGGCTTAACTGGT
ACTGCTAGTACCTTACCACAATAAGGGCAATTATGCCTCATAATTTGCATTACATATCAA
TAATTTGGCATAGCTGGGCTCGGGCACTTACATCTAATAGAATGAAAATGTCAGGCCGGA
TTCCAAGAGTTTCCAGTGCCATTGCCTGTGAATAACTTCTCGGGTAACCATCCAAAAGCC
AACCCTTTTCCTGAGCATCTGGTTGCAGAAGACGCCCCTTCACCATCTGGCGGCAACCAA
AAAATGTTTTTCAGTGTTACCACCATTCACTTGAACCACATTAATGAAAATGCAATTACC
CACATTAACAACGATCTCGTCGGGAACCAGCTTTCCCTTCTCCATGAACTCCTTGGCCTG
CTTCCCATTGTCGGTGCCTGTGGCGATTTCTGCCCTTAACAAATCTCCGGCTGAAATGTG
CACCAGACCATACTGCAAATTACAGTGCCGGTTACTTGACATAATAAGGAAAACTAGCCC
TTATGTTTTACCGCGTTGTTGTTAATGCACAAGGCTAATTAAGGCTAGATCCCAATTCAG
ATAATGCAGCATGAAAGAAAGGGAATCATGTACAAGGCTGAACTCAGATTCCCAAAAGGC
TCACTTTGGCCTTGATTAGCTCGCACTGCGTGCCCTTCCCGGACGCCGGAGCACCCGCTA
TCATGACATTTAGAGGGTCAGCCTTGGCTGCCTCCACAGCCTGGAATTCCCAATCAAGAA
CGAGGCAGTGAGAAGGCTGTGATTGATACGTAAAAATTCGTTCAGGTCCTTAATGCTAGG
AAATACTGTAGGTCAGACCTTGGCCGCTCTAGGCGCCGGCGAGAGCCCTTGGTGTCGGGA
TGAGTTGATCCGTAGGGGTCTGGAGCCGGCACGGGAGGCGCGGAAGAGGAGGCGGCCCTG
GGGAACCGGCCTCTCGGCGCCAACGGGCGGCGGTGAGAGAGCGGAGAAGGCGGCGGCCGT
GGAAGAAGCCATGGGCGGCGCTGAGGGGGCTGGGAGAAGGCGGGTTCACGGGAACGCGGT
GCTTGGACGCTGGGAGCGGCGCGCCGGCGCCGGAGGGGGATCGGAGATAGAGAGGGAGAG
GAGGACCGTTCTTGTAGTTGGTAGGACCAACGGAAAGGAAAACAAACAAACAAAATTTGG
TTGCGAGGAGAAACAAACTCTATTTTTCTAACAAGTGGACGGAAAATAAGGATCCTTGTT
ATCTCGCTGCGTGTATTTAGATGCATACATTTCGTCCATTGCTCTTTTTAGTGCCAGAAA
ATGTGCATTGGTTAGCGACGACCGGCTCTTGCGTGCCATGCCACACATACCAGCGGCTGG
GGTCCGTCATTACGGACAGTTTGAAATGAAGTTGTACGAGTTTTTTTTAAAAAAAAAATA
TTAACTTTACTTTAGAATGAAAAAACACCCGCATCTATATCTATACCTAATAATAAAGCG
GTTATTGCTTCCGTCGGAAAACCCACCGTGGCATTTTTATAAAAAAACTGTATTTTTGGT
TATTCAACCCGCGCTCCATCATTTATCTCCAACGTAAAAGAAAAAACGATTCGCTCCAAA
AATTATACCCGTACGCAT