Contig Data
morexGenes
Links



Map Locations of contig_66850 (3536 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_66850

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74956 1 617 bp MLOC_74956.1 Available Available LOC_Os05g02520.2, FRAME:+1, EVALUE:1e-89, 13105.m00221 protein cupin domain containing protein, expressed





CDS Structure of MLOC_74956






Contig Sequence (3536 bp)

>contig_66850 3536 assembly3_WGSMorex_rbca.fasta
GAACAAAGTAGACATAACAAATATAAGTTTTCTAAAATGTTAATTATGTATTTGGAGAAT
GTCAAATGTGTATATAAAAATGTTTCTGATATATACAAAAAAATGTAAAATGTGTATAAA
AAAGTAGATATCAAAACTAAATATGTTTTGGAAAATGTTAACCATGAAATTGGAAAATAT
TAAACGTGTATATAGAAAATGTTTCTGATGTATAAAAAATGTACAATGTTGCTGATGCAA
GCTTATCGTATACCAATGGCTTAACTTTGATTTTCATATTGTTTTTGTATTTTTTTTTAA
ATTAGCAAAGATGCCCGTGCATTGCAACATAGAACATTTGGTATGCATGTTCTTACAAAT
TGATTGTTTTCGATGAAGCTGTCTAATATGTTTGCAAACAAATTAAAACTTCACTCGTAC
TATAAATGTAAACAAATATATCAGCAAGACAAAAATAATACGCTTATGCATATGCTATCA
TTAGTAAAATAGAACATACTTTGTTACTTCCATCATAATGCAAATATGGACATCACCGAG
GAGGACCGACAACAAATGTGTAAAGAGATACCTGCGACTTCGTAGATATTTTTATTATTT
AAATAAACTAGAAAAACCTTAAGTGCACTTCAAAAATCATCACATTTTTATGTTTTTGAG
CAACACCGGTTATCATGTTGTTTCTCATGTGCCATTGTGCAAGATTTTAGGAGACTTACT
TATATCTCAAGAGCGTGTATGTGAAGTGAATTTTTTTTATTCCGTTGCAACGCACGGACA
TGTTTGTTGTATATAACGCCTATATTATATGAGAAGAGTAATGCTATTTTTGTACGAAAA
TCTTACGCGCTAGTCTATTTAGTTGACGGTTATTCCCTTGTTTTTCTGTGTGCAGTTGTT
GTTTCCCTTCGAGTACGTAGCTTTTACGTAAAAACTGTGCGTAGGGACAACATTCTTGCC
ATGACAACATGTTCACCCTTCCTCCAAGAAAAAAAAAGAAGGCAACAACTTCGTTAACAA
TCCTAATCCTAATCCACGTCAAAGAAAAAAGAATCCTAATCCTAATCCAATCCTATTAGT
ACGGCCGTTAATCCTATCTTCAGCAGCCTTCCGTGTGTATAAATAGAGAACCGAGGCCCG
ATCGATCCCACATCGCCTCATCACACCCTCGTCTCCTGATCCCGTTTCTAGCTCCTGCTC
CTCGCTCGATTGTAGCTCCTTTTTCGTGGCCATGGCGGTGGATCTGACCCCGAGGCAGCC
TACCAAGTCGTATGGCGGCGACGGCGGCGCCTACTACGAGTGGAGCCCGGCGGACCTGCC
AATGCTCGGCGTAGCCTCCATCGGAGCAGCCAAACTGTCCCTCGCCGCCGGCGGCATGTC
CCTCCCCAGCTACTCTGACTCTGCAAAGGTGGCCTACGTCCTCCAAGGTATGTTCATGCA
ACCGATCGATCTCGATCGCCGAACCCCATCTTCTCCCGTACCGAGTCCAACGGATCTAGA
TGCCAGTGTATTAATAGAATCAGTGCAGATCGAATCAATATGCTAACGTAGATTTTGGAT
CACAGCTCTCCTGAATTATCTCTGTCAATTACACGTTGTGATCAGCTCTGAAATCGCACT
AGTTGTTTAGTTTCCTCAGTTTAACAAAAACACATACTAGTATTGCAGTTCTTTGCTGAA
TTGTTGATGGGTGCTGATCTATCTCTGTTGGTTACTGTCCGTAATTTAGGCCGATTTCTG
CCGTAGATTGGAATTAAGGCGTCTCGTGAATTATCTCTATCGAATGCATCAGATCATACT
TATTTGGAATCAATAATAACGGAACAAATATTATTGTATTTTTTACTGAGCTGTTCTAGC
TAGTCATCGTTCATCTTAATCAAATCTTTCTAATGCATGTTGGTTTTCCTCTGATAGCAC
GTACTGTTCTTTTAGGAGAATTCAATCCTAATACTGATTAGTTCGATCCATGAATGATTG
ATAGGCAAGGGAACCTGCGGCATCGTCCTGCCCGAGGCCACCAAGGAGAAGGTGGTTGCC
GTCAAGGAAGGCGACGCTCTGGCGCTCCCCTTCGGCGTGGTCACCTGGTGGCACAACACC
CAGGAGTCTACCACGGAGCTCGTGGTCCTCTTCCTGGGCGACACCTCCAAGGGCCACAGG
CCAGGCCAGTTCACCAACTTCCAGCTCACGGGCGCCAGCGGCATCTTCACCGGCTTCTCC
ACGGAGTTCGTTGGCCGCGCCTGGGACCTCAAGCAGGATGACGCCGCCAAGCTCGTCTCC
AGCCAGCCGGCCTCCGGCATCGTCAAGCTTTCCGCTGGGCAGAAGCTCCCGGAGCCGGTG
GCTGAGGACCGTAAGGACATGGCGCTCAACTGCCTCGAGGCCAAGCTCGATGTGGACATC
CCCAAGGGCGGCCGCGTGGTGGTGCTCAACACGGCCAACCTGCCGCTGGTGAAGGAGGTC
GGACTCGGCGCCGATCTCGTCAGGATCGACGCCCACTCCATGTGCTCCCCTGGCTTCTCG
TGCGACTCGGCGTACCAGGTGACGTACATCGTGCGAGGCAGCGGGCGCGTGCAGGTTGTC
GGACCAGACGGCAAGCGCGTCCTGGAGACCCGCATCGAGGGCGGAAGCCTCTTCATCGTG
CCCCGTTTCCATGTCGTGTCCAAGATCGCCGATGCCTCCGGCATGGAGTGGTTCTCCATC
ATCACCACCCCCAAGTAAGGACTTACTGAAACCAAAACTTGCCATTGTACCTATCTTCTC
CCACCTGAAAACTAATTCTAATGATACGCTTTGTGTGTGTTATTGCAGCCCTATCTTCTC
CCACCTGGCAGGGAAGACATCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCTTC
GTTCAACACGACGCCGGAGATGGAGAAGCTCTTCCGGTCCAAGAGGCTTGACTCCGAGAT
CTTCTTCGCCCCCAACTAGGGACATTCATCTTTCATTGGCCGGTTGCCTTAGGCAGAACT
AAATAAATTTAGTTAGGAGAGTGAATCTCTTTTGAGTGTCTGAGTCTGTCAGTTGAGCTG
GTGGTGAATTTAATCGGTCACCTCTGCAAATCTGTCTTAGCAAAACAGAAAGTTACTGTC
ACGTCTACGTTGGTTAAATTGAGTGTGAGTGTTTGTTGCCGGCCGAGGTGGTCATGAACT
GATGAATGAAATCGATTGTGAAATTTGGGGGAAGTTGTTTGCCTTCAGTGTTATATTTTT
CCATAATTACTGCATCTGCTAGTGTTTCTCCTACTTTCTTGGTTGAAATTAAATTCTTTT
TTACCTCCTCTTATTCTCAATTCTAGTGTTTTGAATCCGAGACTATTCTTGGAGAAAGGT
AATATTTTCGTTTCCAAAAAACTTCATAGCCTTTCAATCAAAACAAGAAAGGTGTACTGA
TTTCTTGCCAACTTAAAGCCGGGCAAGTTTGGTGATTACTTTTTGAAAACGTTGCTTAAG
GCCCTGTTTGGAACCACAATAGATTATAATAATCTGGATTATGAAGATAGATTATA