Contig Data
morexGenes
Links



Map Locations of contig_66843 (4759 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_66843

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74954 1 1094 bp MLOC_74954.1 Available Available LOC_Os01g14640.1, FRAME:-2, EVALUE:6e-56, 13101.m01610 protein hypothetical protein





CDS Structure of MLOC_74954






Contig Sequence (4759 bp)

>contig_66843 4759 assembly3_WGSMorex_rbca.fasta
ATGATATGTTTTTTGTAATATATGTCTCTTATTAAGTTGGTCAAATTGACGACCTAGATA
CACGTGCAGGCCTTATAAACTGAAACGGAGGGAGTACTAACTTTTTACCGGTTTATAAGG
CTTGCGCGTATCACTATGTTGACAATTGACAAATAGACCATCGTAATACGTAATACAATT
TATATATCACAAAAAATATGTTATTAGAAACTTCAAACCGTCTACTTTTTAATGGTATAA
GTTTTAGACTATACAACTCATTTTAACTTGATCAAATTATAAATTTAGGGATACGTGCAA
GCCTTATAATCTGGAAAGGAGGTACTATGTGTCATGCATGTCAATAAATGAGATCATCTA
TGATACTAGTTTATNNNNNNATGCACTATGAAGGTAGTATCATATAATAGTAACATATGC
ATGATACTACTGTATGTTACTCTCCACTATGAGCAGCCTTAGGCATGATGCATTAATTTT
CATCTCGTTTTTTGTTTTTTGACATGAATAAATAAATCAACCAATAAGAGACGTGAGGCG
TGTATGTTTTTAATGACTCGAGATTAACGAGCACGACATGCAGTGGTCAGTTCATTGCAT
GCAATGGTATTAATTAGCAAAATAATATTAGTTTTTTTGTTTTTCTCTCCATCTTGATCA
CGGTGCACAACTTAAGATGACCTATACACCGAGACGGAGGGAGTAGTTTGTTTCCGGGCA
CAGTTGTTGGCGACTGACCAGAGGATTCGATAGAAACTACTCCCTCTTGTAATATAAGAT
ATTTTAGATGACTAAAGCAATGAAATGGGTTAACTTGGTTGCCATGTTATACTCAGTAGT
CAGTACATAGTCACGTATACCAACGTCGACTATTGGAGCCAATTAAATTAGCTTGCAGCA
AAAACTGTGCCGTCAAATTTGGCAACATGCACGGCAGACTGGCAGAGTACATCTAGTTAA
CCCATGTGACATGACACGCCATGACGCAGAATTACTTACGCTAGCTGCTCGATGCTTCGG
TCCATTTCCTCGGACTCAGGGGTCACGTAGTTCCACCCAGAGCTCCCGCCGAAGTAGCGA
TCCCACACGCCCTCGGCGAACCTGTCCACCTGGAGAGACACCAGCTCCTCCTCGAGCGCC
GCGCCGTCCTGCAGGCTGCTGCCGACCACCACCCTGCCGGCAAACACCACCTCCTCGCCG
TTCTCGTCGACGCAGAGTTTCTTCCACCCTGCGCCACCGCCGCTGGGGGGGCTGCGGTGC
AGGAAACAGCCCACCTGGACGTCGCGCCTGTCGCCGTACGCGCTCGCGTTCGCGCCGCCG
TACACCTCCAGGAGCCCGACCTCCGCCCTGTCGCCCCAGAGGAGCACGACCTCTTTCGCC
GCTCCTCCCTCTGACGACTCCGAGGCGACGAGCAGGTACATCGCTGCGCAGCAGATGGTG
GTGGAGACCACCAGGGGCAGGAAGAAGACGACGACTCGAGAGAAAGCAGTGCCGCATACA
AGCAAGGCGAGGGCGGACAGCAAGACCGAGGAAGCGGTGGAGGCGGGGAAGAAAAAGAAT
TGGTTGCGCAAGCGCGACGCGCATGCGTGCAGTTTAGCGCCGAGATCTATCAGCAAACCG
CGGTTGCATGCCGTAGTAGTCGTCGGGCTACTGGCCATGGCTGCCCTGCGTGGACCGTGG
CGAGAAATTAAGCGTTTTAAATTGAATTGGTCCGGGACTGGTTGGTTTATGAGTGGGAGA
GATGGGCCGGAGAACATATTCTCTAGGCACTGTGTCAGGTTATGGAGTCATTACTTTTTT
CTTTTTTGAGGGATAGGAGAGGCGCTAAAGAAAGAATCATGTGTACCCGTCAAGAAAATT
ATAGCGAACCAATCAGGGAGACAGTGCAACCTTGATGCACTGTCCGGTTGCTTTTGCCTA
TTTCTGAATATTTAAATCCGAATTTTTTATGAGATGTTTTCGGTTATTAAAGAATCTGTA
TCTAATAATAAAGCAAATACTATTTCTGGTTGTACTCGTCGTGGTGTTTTTGCAAACAAG
TCCCTGTCATTTCTGTTAATTAACCCGCAGTTCATTTATAAGTGAAACCAAACCGTTTTT
TTTTTCATTTTACACAAGACCCTCTTACTTTAACGCTATATAACCCGTGGTTCAAATTTT
GATCAGAGTGAATCGTTTTTTTAGTTTTATGTAAACCCCCTGCGTTAATAACTCTGGAGT
CTATTTAAAATAAATATGTATTTTTAAATAACAATAATTTTTTAATCTGTAAATCCAATT
TAAATATGTTATATAAGAAATTTGATTAAAAATGTGTAGAGTTTGAATATGTTGTTATTT
TACATGTTAAATATTTTTAAAATACTATATAGGATACAATGTTAATCAATATTTGTCTTT
ATTTCGTACCGACGATCTGTATCGTAACATGTAAACTTAAGGGTCAATATTTAAGAAATG
TTATAATCTTTGGGCATGATGTACTTACACTAGGTTCTTTCTTTGTACATATTTTATAAT
CTAAGATATTACGTACGTGTCTTTTTTTTTGACAGAATCCACGGGCGTTTTTACCAACGG
ACTACGCTTTTTTGTAGTGAATATAAAAATAAATTTTATAGGTTGTACATGCACTTATAA
AATTGATGAACATCAGAAGTACATGGAGGTTTATTTCAAAAACATCTAAACTATTCGTAT
GATAGTAATTGAATGCTAATAGTTGAATTTTTTGTTTGAGGATAACAGTTGAATTGATAA
GTACAATCTTAATTTGTTTTCATCTATTACGTGATGGATATACATATAGGCTTTTTCAAA
TAGACTTAATTTATAAACATGGTCTCCTCAATATCGAACAAGACCACGTTGATGATACCT
GAGTATGGTCGTAGGTGCACACCATCAATATGACGAGTCAGAATTAAAATTTAATTAAAA
TGATACGTCTCAGGTAAGAAATTTTTACTATCCGTTGCAACGGGCAGTTTTCCTAGTATG
TGTAAATGACGTATTTTGGCTCGTTATTAATGCGGAAGTGACAAAAAAAGCTGAAGAGGC
GTTGGAAGAAGTGGATCGATATACTGTAGCGGTGCCGAAGAGTGAAGGGGACATGGGGTT
GAGAGATATTCAATTCTTCAACCAGACAATGTTGGTGAAACAAGGTTGAAGGTTATTAAC
AAACCAGGATTACTTGTGTGCAATGATGCTAAAAGGCAAATATTTTCCTCGCTGTAGTTT
TATGGAAGCAAGTAACAAACGTAATTCCACCCACACTTGACGAGCATTTTTGCATGGCAG
AGAGGCACTTTCCATGGGATTAATAAAGAAATGAGTGATGGAAACTCTATAGGAGCGTTT
GGTTGCCTCTATAGAGCCCAACCAGGCCCTCACGGGATGAAAATTGGTCGTTTGGTTGCA
TGTATTGAGGCTTGGCTCGCATGCACACGAAACTTAAAGCACCCGAGAGCCTAGCTCGCA
GGGAACACTCAAATCAGCCGTTTCTAGCGAGCTAGGATGAGTGTGGTGTAAAAGGGGAAC
GCGGCGTAGCACGTGGTGCGGGGGAGGGGGGATTAGGTCGGAGATGGCGGAAGGGGGAAA
TTTGCGGAAGCGAGATGGCGCGAATATACGCTCACCACCCCCATTTACCCGCTCACCCCT
AGCTCTAGGACAAGCCATCATGTGTTATTGGCATCGGCGGCGGTGCCGACTCAGATCTGC
GGCTACGACGACGACGACATCGGCAGCTGCTTCTCCCCTTCTTCTTTGATTTTGTCGGGC
CATCCTCGTCTCCGACATGTCTCCCCCGACCCGGAAGCTGGTAAGCTACCCCGCGCCCCT
CCTCTGCTAGGACCATTTAGGGTCGGTAGCGCCTAGGCTGATCGCAACATGGATGTCGCT
TAGGTTGTAGATGAACAGATGAAGCTTCTAGTTCGTGCAGCATCACTAATAGTTGTGGTT
CATGCATGGATCATGTTGGTCCATAAGAGAGCTCTAAGTCAGAATGAGAGACCTCTCATC
CGGTATGGTCCGATGTTAATCCGGGATAGGGAGAAGATAGATAATCTGAACTACATCTAC
ACCTACAACGACACAAACACTCCATGGATGCTTACAATTAAAAGAGCACCATTTACAAGA
CTTATCCAGACCTTGAGGAGTAGGGGGCTGCTAGAAGATAGCATCCACACCAGTGTTGAA
GAGCAAGTGACTTTTTTCCTTCATGTTGTTGGCCATAACTAGAGGTTCAGGGTTATCCAC
AACACATTCAGGAGATCAATGGAGACCACCTGTCGGTACTTCAAGCAAGTGTTGTATACT
ATTGGGGAACTCAGAGGAGAGATGATCGTGTCACCAAGCAGCCGAACTCATACCAAGATT
CGCAGTAGCCCAAGATGGTATCCGAACTTCAAGGTGAGCACTAACAATATGTTGTTGATG
CCTTCATATGTTGTTCTTGTTCTCATTCTAGCCACAACACCATCTTGTAATGTCATTCCG
GGATTGAATTCGTGCAAATAGATGGTACTGGTGTCACTCCCGAAGTGTTGACGTCACAAG
CTACAACATATTGAAATGCCCAAGATGCGGTTTGATGCTTATTTTGGCACGAGGGCCTCG
ACATGGATAGAAACGCATCCCGTTGTTTCGCAAGAATGGATATCGTTACAAGTACATGTA
CAAAATAGACGAGTATATGGAATTGGCTTACACTCGCCACAAGCTACATCAAGGTCACAT
CAATACAACAATATCCAAT