Contig Data
morexGenes
Links



Map Locations of contig_66766 (6643 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_66766

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74915 2 1443 bp AK248822.1 Available Available None





CDS Structure of MLOC_74915






Contig Sequence (6643 bp)

>contig_66766 6643 assembly3_WGSMorex_rbca.fasta
CCCCGTAGAGGGGCCTGACCTCATACGTCCTCGCCGTAGCTAAGGCTCTGTCCATCCTTT
CGTCCCCTACACATCTANNGTCAGACTTATACCCACGACACCGCCAATACTCGTCGTATT
CACGCGGTAGATAACACGCAGCTCTACCTGCGAACCTCCGCACCACCGCCACCGCCCCTT
GCCACCTGGATCCCATCGCCAGGACAGCCCTCTCCCGAACACCCAAGCCTCTCTAGACTA
CGCTTTCATGAAGACACGCAAAGCATCGCCGCCGCCCAATCACGTGGATTTTGGACTTTC
CTTCGGCAGGGGGGAGATGGAATTAACCACATGACACCACACACCACTCACTGCTGGCGA
AACAACGCCCCCATGAAGGTAACGACACTAAGCGCTGCCACCGCCACATCCGGAAGGTAT
AGCAGGAATTTACCTTGGGTTGGAGAAGAGGGAGTGGGTGGAAGGGATCTCGTCGGTGCC
TCCAAGGAGGGAAGCATTGCTCGCAGGCGATGTCACTGACGTAGATGGCCAAGCCACCAA
AGGATATTCTTCTCGGCCCAACTCACACCATCGTGCGCAGCCACCATCAGCCCGGTGAGA
CAAGATCATCGGCGCGAGATCCAGAGGGAAGTGGACCACACGGGAAACTTCAGATCTAAC
GCCACGAGCACCGCGAGAGCAGACTGTCGGCCACGAGCAGTGCCTATCGTCGTTGTCGAG
GACACCGACCCTCTCCCACGAGCACCGTGAGCCGCAAAGATGGCTTCGCCTCACCATGCA
GGGTCGTCGCGCTGGAGCACAAAGGCCCCCGCCAATCCCGCAGCGACGAAATCGCCGCCA
CCACCTTCACCAGCAACCGCACGGGCTTGTCCGACAGCCTTCTCTGGTGACGGCAAGGAA
GATGAGGGGGTTAGGAGTGGCAGTGCGGGTAACCCTAATCGCCTCCCGAGAGGATGACGC
GAGGGCCAAGAGATACAGGGGGGGGTCACAAATGACGTTGTTTCAAAGTGCATCGAGATA
TAATGGCATGCGCTAGAGAGTGGATTTCTTGCTTTGGAGCTCCATACAGCCCTATTTTAA
AAAAAAAATCAAATTCATAATTTAAGGTTTTGCAAAAATCTATAAAAAAATACACACGAA
CATTGAGTGTCCTAAAAATTTGCAATATTTCATGATCAAATACAATTTTTTGTGAGTTGG
CTAAAAAACATTGTCTTTAGTTTGAACTATGATGTATTTCTAAAAAAAATCATAATTTAA
ATTTCAGGAAAAAAATACACATGAACATTGAGTATATACTACGTTTGTGAAAAGTACCAT
GATCAAATATGCTTTGATGTGAGTTGTATAGAAAAAGCAAAATCGTAGACTTTTTTAGTG
AATAGTGCATGTGTTAGAAATATATTATTTTTTTGTAGCGTTAATCATGTTGTATTTTGT
TATGAAAATTTAGGAAGATGTGGTATACATCCTTATTTTCATCTTTACCTGAAAAATGAC
TTATCGCTTCTGCTGATAGATATATTTTTTTTTGCTTTTTATAGAAATATCCCTTGGGTT
TCAGTTTAATAAGTCCGTCTCCCGTCTAAAAATGACTTTTTTTAAAGATTCAAATGTTTT
TCAAAAATCCATATCTTTTAAACCGTGACTTCAATTTTAACTTTTTATATACGAAAATTC
ATTAAAAAATATATAGAGTCTGAATATGATGTTCTTTTTATCCATTAACCATTTCTAAAT
GTTGTTTAGGTACATATTAAAATGCTTGAAAACATAATTATAACTTTTAAGCACCAACTC
TAATTTAAAAATGTTATATATGAAAATAGATTAGAAAAATGTGTAGAATCTGAACATAAT
GTTGCTTCACCTGTTAATAATTTTTAGAATGTAGGATGCAACCTTGATTAGTAGTGCACA
ACCCGGCTTTCTTTCGTATTAGTGTCGTCCCAAATTAAAAATGAACACCTCGATAAAAAC
AAATTGGAGACAAAAGAAACCTGGGAAGAAGGACAAACGGCAAGAATGATAAGATGTCAT
GTCGAAATAAAGGGCTCGTTCGCAAACACTCCGGCTCCCAACTCCGTGGTGGAGCGGAGC
GGAGTGCAGTTGATTTGTACGGAGCTGACATTCTGTCGCTCCTCATTTTCAGCTCCGAGG
GAGCGGAGTGGCCGGAGCGGGCCGTTTCCGAACAGGCCAAAAGGACGTAGAGTTATTGAG
ATCTTGAGACATGGTTATTGTGTTGTGAGCGTGTGGTCTTTCTTTGTCTCGTTGAAACGC
ACAACCTCTTTTGCTAGCGTGTAATTATTATTATTTTGGAAACTTTAGAATATGATTTTT
TGTAGTTTCAAAAAAACAAGGATCCATTAAAGAGCAATTTCGCACTTGCGAGCACTATTT
AATTTCCTAGTCCTTTTTCTTCCAGATTCTTTAGCCACATCACGTGCCACAGCAAGAGCT
GTTAATTAATGGGGTGAAAGGAGAAAGCCATTCTCTATTTGGCACCCTACTTACCAAATA
AGGGCCATTCTGTAGCGAGCAAACAGGGGTTAAAATCAGTGGTGGCCCGTCCATGTACCG
GTTTCTCTTTGGAAAACGCTTCTCGTTCCGCCGGTCGCGCGACTCGCATGGCTGGCTGGC
TAGGCTTGTAAAAAAGTTTCATTCAGATTTACTGCAACCATCGTTTTTTATTTTGCTATA
ATTTGTTTATTAAAAAGTTACATCCACATTTGATTGCAACTCGAGTTTGTTGAATTTTTT
TGCTACAACCGGCGTTTGATTTTTGTTACAACCGTGTTAATTTNNNNNNNNNNNNGTATC
ATTTTTTGCTGCAACCATTTATTAAAAAAATTGCATATACGTTCGTGAGAGTCGCAACCC
GAGTTCATCGGATTGTTTTGCTACAACCAACACTTTGTTTTGCTACCAGGCATCATCAGT
GTCCTTTTTTTGCTACGACCACGTTGTTATTTTTTGCTACAATCATATTTTTGTTGCAAC
CGTGAACGAAATTTGCTGCATCGAGTGATTTTTGCTGCATGGAAGATCTAACGGTGCGGC
CCGTGGATCTGAGACTGGGCTGCGACCGGCGCGAGCGCCGACCTCTAGTACTGTCCTTTC
TCTTTGCACCAGTTTTATCAAATATTTTAAATTTCATGAATATTTTTCTTTTCTTTTCTT
TATTTTATTTGCTTTGTTTAATCAGTTTTCTTTTTTTTTATTTCCATTTTTATTTTTGAT
TTTTTTGATTTTTGATTTTTGATTTTTGATTTTATTCAAAAAATCACGAATAAATTTTTG
AATCCAAAACAATTTTCATACTATGGTTGTTTTCCAAATTAGAGAACATTCTGATTTCAT
AAACATTTTTTAAAATGTCTAACTTTTTTCAAGAAAATCCTTAACCACTTTTTGAAATTC
ATGAAGATTTTTTAAAATCCTTGCCAATCCTTAACCATTGATGACGAGGAGGTCTCCGAG
CTCCTCCAACCTCACAAACCCACTTCCTCAACAACCAGACGTGCCTGTGTAGCTCCTAGC
GCCTCCAGTACAAGTCACATGACCCCGAGGAATCATTCCCCCGATGCCAAGCTCCGCCAA
TCGTCGTCGTTGTTGGAGTCAACTTCGGTCTTCTCCGACGGTCATGTTGGATGCGATGCA
ACACCCCGAGAGCTCACCGGCCACCTTGCCTTGCTCGTGTGCCCACCCACCTTCTCCCGT
GTGGGCTTGTGCTCGTCGTCGTGCGTGCTTGTGTTCCGCTCACCGGCGCAGCCGGATTTG
AGCCGCACGAGTTGCTGCCCGTGCCCCCCACATTTGGCCAACTCACTAGTTGGCCCTGTC
AACTACAGATTGTTTGACTAAGTCTATGGGCCCACATGTCATACACTATCGCTATTCTTT
TGTTTTCTTTGAGGTGGATCCCACCTATAAGTGACATAAGAAGATAGGGGCAAAAATGTC
CAACGAACACCCCTCTGACGGTCAAACGCCGTTCACTGGACGAAAATGACACGGAAGGGT
ATTTCCATAATGTCTTCTAACGAAAGAGAGGCAAAGTTGAGCACTGTTTTATTTTAGGGG
TAAAGATAAGGTCGGGTCAAAGTTAGGGAAAAAAATGAAAATGTCCCTTTTATAAAACAA
GAGTTGACACTAATGAAGCTCCATCTCTACGACTATTGTTACAAACTATGGGTTGGCCAG
TTTACCTATCTCACCGACGAGGAACTCCACTCCGTGAGAACAAGGTTCCAACACCGGTTG
AAGACCATGAATGGTGTAGGGAGTGGCGGTGGAAGGTTTGGTATGCCAACTTTCTGCATG
GTCCTATGCAACAGGGAGCACGAACCAGAGGGAGTCGCCACCATGGTCACTTGCTAGTGA
CACCATGAGATCCGAGGCACTGACCATGTCGTGCTAGGTGGGATAGTAGACTATCGGGAG
CGGACGGGACGAAAAGAAGGGGTGATGTGTCGATAGCTGGAGAAAGTGAGGAAGAACACG
GAATTGGTCGAGTCAGGTCGGATGAAGGGGTACATTATTTTTTCTCTTTTTTTTAGTAGA
GGCATTTGTGTCAATGCAAAAATACGGGGTTAAATGCGGGTCCCTTGTTTTGATAGTATA
TGTGTTCAAGTGCCTATAATGAAATCTTGAGATTGTGCGGAATTTGGAGTTGCTTTATTC
GAATGATAAAGAAGTGGCATTTCTTGAGTGGCAAATACCCAATTAATTGAAGAACCTAAA
GCTATAGACGATGGCTGTGAGGGATTTGGGAAGTGGAATCCTTAGTAATTAGTATGGAAC
ATAGTTGCTATGTTGTAAGTACATCTTAGGATTTATACAAGCATTATAGAATCTGTATGA
ACCCAGTAAAAAGACTCAAACTGCAGTGTCATAAGTCAACTAAGCAAAAGTGTTTTCGTT
TTTCTTCCAAACGACATAGGACAACGGGCAGCTGAATATCAGTTGATGGCATATCATATA
CTTAAACGGTTAAGCCATAAACATGCATTGTCCAGGGTCTTCAAAATAACAAGTGTGCCC
CCACAAACATTTCCCAATCATATGAAGGGATTCGTAGGTTTTACAACGCAACAACAGAAG
TTACAAGACACTCTCGACACACCACTCCATGTACTTCTAAAGTACTCTCACATAAATCAC
CTTGTGGTGTTTCCACAATGCAAGGCTACACTAACAATGATTAAAATGCTCAACTCCACA
AGAATAATAACTTATTTATCTCTAGTACAAGTGTCCTACTAGTATGAGAGAAGGGAAGGC
CTAAGCGGGTGCTGATCAGCAGCAGCCTCGGAATAGCCAAAGGCCTCTTTTGTAGTACTC
CTTCTGTCCTAAAATAACTGTCTCAATTTTGTACTAGCTCTAGTACAAATATAAGAACGA
AGAGGTTTCCTTCTTCCCTTGCTCAAGCTCCAAACCAGTGCAATCCATGCATCCAAGGGG
TGATCTCGCTAGAACTGGCCTCCTTCGAAGGTCTGGCCAAAGGACCAGCCGGCCGGGGCG
GCGTTGTTGCTGGTGACGGTGCGGCCGTCGCTGAGGGTGACCCGGAAGGAGAGGCTCTGG
CCGTCGAGGTCCGCGTTGCTCTGCCAGTTCTGACCCCAGTTGCGGGACATGGCCTGCCAC
CCGGAGCTGGACCCCTTGATGGAGACGGACTGCACGTCGCCGGCGCCGGCCACGTTGGTC
ACCAGCACCAGGTTGAAGTAGGAGTGGCCGTTAATGGTGAACCTTATCCCTCCCTTCTTC
ACACAGGGCACCCTGCAGCACAATCCGTGAATACGAAATGTTAGTGAAACCGCAATAGTA
GTTTAGTTTCTAGTGGACTGATGATTGGGTCATGCAACTTGGAACACATCATGGTCAAGT
GAACGTGACGCCTAAACTATTTCGAACAGCAGCTAGAGTTGCTGTCAGGCGATCATGCGG
CTTGCTCTCCTACAGAGTTAACAAACCGAGACCCAACTAAACCAAATCTGCACTCTGGCC
CACCTAACATGGACTGAGATGATCCATCGACAGTTCGACACCGACACGGGGCCAGATCAA
GTAGAGTTTGTGCACGCGAAAAGGTTGGTAACAGCAGGCTCGCTCGACCGTCTCACCTCC
GGTAGGAAACGGGCACGATGCCGGCGCGGTAGATACCGATCTGGAGGTAGGCTGGCTCGG
CCATGTCGAAGTGTGCGCGCGGTGGGTTGCACCAGCCGCCGTCGTCGTTGGGCAGCGCGT
AGTTGGGCGGGCAGAGGTTGGTAGCGGTGATGGTGATGCTGCCCGGCACGCACGAGCTGC
CCTGGCACTTGAGCTCGTAGCACGACCCGCACGCCGCGCCGTCGTTGAACAGCGCCGTGC
TCAGCGCCGCCGTGTTCGTGCCGTAACCCGTGCTGTACAGGTTCCCGTAGCCGCACGCGC
CGCCTGCAGGACGCAACATGAAACCAAACCATACAGGACACCTCAGTTAGACACTGTACG
TACACTCATGTCGGGAACCATACACATATATAGCGGTGGGTAGGTGTTTCTTGCTTCGAC
AGTGTAATTAACACTGATGATTGATGAACTCACCCATTGTGCCGGACGCGTCGCCGCCGC
CGTAGAAGGTGGCGTGTGCGGTCTGCCACGAGCCGTAGTCGCC