Map Locations of contig_66655 (5654 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_66655

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74853 2 2208 bp MLOC_74853.2 Available Available LOC_Os12g32986.1, FRAME:-2, EVALUE:4e-148, 13112.m03364 protein heat shock protein, putative, expressed





CDS Structure of MLOC_74853






Contig Sequence (5654 bp)

>contig_66655 5654 assembly3_WGSMorex_rbca.fasta
GTCAACCTCAACCTAGAAAATCAATGGATGTATTGCATAAGCAAGGTTCCACTTTAATAA
CCACAAAGAGCTAGAAGGATTAGTAACCTCTTTTGTAAAGCCCTTCTCTTGCCAAGTGTA
AATTGGGAAGGAAACAAACTGAGAGTAATTCTTCAGAAGTTTTTGAATCCTCTCAGGGTG
AGCAAAACCCTTGTCATCACGCTGAAGCAAAGCATAGTACATATTTCAGATGGGACGTAC
AGTAAAACTTTAAAATCATAAAATAAAAGCAAATGGACCTTCAGGTAAAGTGTAAGTCGA
GTTCCCCTAGGAATGAGCTTCTCTGGATCTTTCTCTTCTCGAATGGTGTAGGAATTAGAT
TCTGCTTCTGCTTCCCAAACATATTGCTTTTCTGATTTTGGGCTCTTTGTTGACACAGCA
ACCTAATATGTAGAGCAGCAGAAAAGTACAGGAAAAGACGTTCAGCATAAGAAAAAGAAA
CACTGCCGCACAACCAGAGTGGCAAATACAACCATGATAACATAACACAGTACCTTGTCT
GAAACAAGAAATGCCGAATAGAAACCAACACCAAATTGGCCAATCAAGTTGCTATCAACA
TTAGCTTCCTGGCTCTCCTGTTATACAATAAGCATAAATCATAAATTAAAAGGATTTGGA
AGATAGACAAGAGGAGAATAAAATATGCAATTAGATCACACCTTTAATGTCTTCAGGAAC
TTAGCAGTTCCACTGCTTGCAATAGTTCCAAGAGAATCAACAAGTTCTTGCCTCGTCATA
CCAATCCCAGAATCACTGGAAAGCAAATGCAGGTCATGATGCAAATCATTTCCAAGAAGA
AAATATACAGTTGGTCACCGGCAAGTAACATATGCTTACGTAATTGTTATTATTCCATTG
TCCTTGTCTGTTTGGATGCGAATGTCAAGTTCAGGGCCATCCTTAAGAAGATCAGGATCA
GTGACACTGAGATAGCGCAATTTGTCAAGTGCATCACTTGCATTGCTGCAGGTACAAGTA
AGAAAAGAAAGGCTAAATTAGGCTGAGCAACTTGACTGAAGTTTTGTGGCACCCATTAAG
CCCTGACTGGGACAAACAATTGCCAAAATGAAGTTAATCCGATATCATGGCAAGGAACAA
GTGCCAATAAACACAACACATAAAGAGTGAATTCGGAGATAACTACTGCCACATAAAAAA
ATTGAACAGTCTATGCACTCAATTGTTGCCCACCTGACCAGCTCCCGGAGAAACACCTCC
TTGTTGCTATACAAGCTGTGCACAATCAAATCCATGAGCCTATTGACCTGCCAAGCACAA
TTTTTTCCCCATCATGACACAAACATTGGTAAAGATTAGCATGAATCCATGAAAAAAGAA
AATCATAGGTACCTCAGCCTGATACTCAAACTTCTCGGCAGGTGGCGCATCAGATGAATC
AACTGCTGCAGCACTCGATTCATAGCGTCTCCCAACAAGTGCATTCTCCCTTAGCTTGAG
GGACGGCAAGCTTTCACCTACATTAAGCTTGGGAGCCGCAAGCACAGAGAGCAACCTCTT
CCCTCCAAGCCGAGAAACACCAGGCTCTGAGTTTGTCACCTGAAATTGGGACAGCACAGC
GAATATCACAAAGTCGCTCGCGTTGTAGAGTAATACTCCCTCAGTTCCTTTATGTAAGGT
GTATTATTTTCGGCACCGTGACCAAGACACATAATTATAGACATGTTAAGACTAGCAAAT
TTGTTGGTTAGTGAAAAGTGAATCAATTAGTCCAGGAAAGTATGAGATACATGCTATCAA
CAAATAAATAGTTTCCTTCTTTTGCTATAAGGAGAGATGCAGACAATCAGAAAAGAGGTA
CTAACAAGAGGATTATGGGGAATTAGAAGAAACGCACCTTACATTCTGAAATTTTATCAA
AAAACAAATACACCTTATATAGAGGAACGGAGGGAGTATAACAATAAATCGGAAGAAAAA
TATCACACCAGACCGCAATTGCACATTTCTGTCGGAATAAAATACCATCAACAATCGGTA
CACAAATGACACATACTGAACAGGGAATCAGATCAACGCCAAACCTCAACTGAATCACAA
ACACACATTAATACATAACCCATCAATTAATCAAAACACAGACCCCAATTTGGGGGCGGA
GATTGATTCGCGACACGTAACGTCAAAAGCCGCACTGATTCAAGCTTAGCGCGAGCCCCT
ACTTTGCAATCAACCAAACAGCGGAGTACAATATGGACCAAACAGTGAATGCCACACATA
CGTACCGAACGCGGCGGGGCCGGGGCAGGGGCCAAGGGGGAGGAGGAGGAGGAGGCGGCG
GCGGCGTCTCCGGAGACCGCGAAGGCGGCCGCGTGACGGCGGGCGGCGGCGCCGGCGCAG
AGGGATCGCCTCGAGGCCCCGAGCATATCCGCTGCGCTCTGCTGGTTCTCCTCCCAGGCG
AGGGCGAGAGATGTAGGCCGGAGGCGCGCTCGCGCAGGTGGGCTGACCGAGGAAGACGAC
GATGCGAGGGTTTTGGAAGAGGGGTAGGGTAGGGTTTTGTGGGCGGCCAGAGGCAGAGGG
GATGAAGCGTATAAATGGGGTGCGCCTTGCGGAAGGAGGGAGTGCGCTTCGCTGACACCG
TGGTCCCGGGCTGTCGGTGAGAGAGTGGGGAAGGGGGGGGCTTGGGTTTGATCGGTGGTG
TTAGCGTTTTGGGAGAAGGTTCTGGAGCAGCGGCGCGGAGTAATGCTATGTGCACCGGTG
TGGATAGTATGTGAATCATACAACGAAGTTGACATGTGGGGCCAGTTGGTGTGACACTTT
GCTTTGCGCTTTGCAGCGTCCGTTCTCCGTTGCAAGAGTGAGGTCGTAGCTTGTCCACCT
GCAAGATGTGAGGTCGAGATTTGAACACCGTGGACAAGAAGGCAAGAAGGTTCCGGGAAG
GGTTGCCATGAAAACGGGGCTTGCATGCTCTCTACCGCACATTTTACATCCAACGACCTC
TTCAATTTCTTTTCCTTTCTTTCTAGAGAAAAGATTACATTCAACCACCTGATCGCGCGC
GCCCGTCTGCCGGCTTCGTGATCGTTCGATCAGACAGTCGACAGCATCGTGGAAGCCGCT
TTTTGTTTTTCATGCAACTCACCTATTGTTTCAGGACAGTTTCCTGCAGCTCACCTATTG
TTTCATGACAGTTTTCTGCACTCGTGTTTCACGATCACTTGAGTCTCCTGCAGCTCACCT
ATTGTTTCAGGACAGTTTCCTGCAGGTCATCTATTGTTTCAGGACAGTTTTCTGCACTCG
CGTTTCAGGATCAGTCGAGTTCCCAGCAACTCGCCTATTATTTCAGGATCAGGACAATTT
CAGGATCCTGCAACTCGCCCAACGCTTCCGTCGGCCGCCCAACGCCTCCGCCGGCCGCCA
GCAGCACGGGAGCGCCTACCACCACGCCGCACAGGTCAGCTCGACACCACCCGCCCGCAC
CCGTCGTCGTCCTACTACTCCACCATGGACCACAACAGGGACAGCTACGCCTACGGGCAC
AGTGAAGGAGGTGCACAGCGGCGGCGAGCACGCCTTCTTCTCCTCCGACGTCACCACCGA
CAGGAACCACCAGCACAACCAACACCACAGCAGCGCCGGCGGCCACGGCCAGTGTTGTTT
CAGTAATTATTTTCGCAACGCGTCTGTTGTTTCTGCAACTAGACCGTTGCTTCGGGAATT
AATTGGCTGGGGAAACGACTGGGCCGCGTGCTAGCGCGTACATCGGACGGCTACGAGCGC
ATACATCGGACGGTTATTCGGGTGATGGATGTTAGTATGGATCCGTCGGTGGACGCGTAG
TTGTTACCTTCTTTCTATCTGCACTATTTTTTAGAGTATTTGGCAAAAAATACAACATCA
GGAGTTATCATGCCATTAAACTACCGCATTTTAAAAGCTGACTGGAAACTATCCGAAATT
TTCTAATTTAGTCATTAAAAACTACCACATTCATAAACCATTTCCTGATGTACGTGTCCG
GATAGCTCAATGTCAATAGTTAGCTCTAGATCTTCCGATCAAAAAATAACGTGGACGAAG
GCGTGTAGGTGCACTATTATGTACCCCCTCCATTCCTAAATATAAGTCTTTTAAGATATT
TCACTAGTAGTCCACATATGGAGCAAAATGAGTGAATCTACACTATAAAGTATGTCTACA
TACATCCGTATGTAGTCCACTAATGAAACATCTTTAAAGACTTATATTTAGGAACGGAGG
GAGTAGTAGGGATTGCAATTTTTCTTGCATTTTCGTTTTTTCACTCAAGGGAGAAACTTT
ACGTCTTGTGTTTTTTCAAAGTTTGACAAATTAAATGATATTTTTGTTCTAATTTTACCG
CTTCTTCTCCCTTTAAATCAAACGTATTTTATCATAATGTGTCATTGCTATTATTATCAA
GTATACGGTTCTAATCTTAGACGGAAAAAGAAATAGAAAAAGAAATCTAAGAAGCGGATC
CTCCTTCAGTAATGAACTAGGTGTTGATAAACTAAATTAACCAATTTTGCCTCGTGTTGA
GGCAATCAAGAAAGATGCATGTTCTTAATATATAACCCATGAAAAAGTGATCTAATCCAA
TCAATCTTGCTTACATAATGAAAAAGGCCACGAGCTTATCTCTCCAGCAAAATAAATTAG
CTAAAGGTGCACGCGTTCATGAGTCCATGCTAAAGTCTCAATTAATTCCTGTAAATACCC
ATGCTAGAAAATTAAGAACATAAATCTAGTAGCCNNNACAAAATGTCCAAATAAGAACAT
CCACGCCATACCAATAAACTATTCAGGATTATATCCATTGATAAGTTGTGAAGAGTAACC
ATAGGTAATCTCTTAACCATCCCATCAAATAAGTTCAGGATTCATTCAATTGTAAAACAC
TGCCCTAGCATAATGTGATATGTTTCCAATGCCGATAAAAAATAACCTACCCAATGGTAT
TTGACATCCAGAAGACTGACAAATAAAATGTGTCTGAAGCAGAAATATCACAAGGGACCG
ATAAACTATTCATCCCAAACGGATTTTATCCATTGATAAGTTGTGAAGAGTTCAACACAC
GTAATCTCTTAACCATCCCATCAAATGAGTGGAGGGTTCATTAAATTGTGAAATGTTACC
TTGTCGTAATGCGATATGTTTTCCATGCCAATAAAAAGTAATCCACCAAATGATATTTAA
CATCCAGAAAACTGNNNAATAAAATGCGTCCCAAGCAAAAATATCACAAGCAACACTGCG
TCCTCGGTTGTGACAAGGAAAACTATACCCAAAATTATAAGATCATGTTGGAGCCCATCA
CCTTGGTGTCGCAACGCCGCAACTTGCGACTCTAGCTCAGAGACATGCGCTGCAAGATCG
CACTCCGACTCGGAAAGCGCCACGCGAAAGATTAAAAAAAGGAACTGACCAGGTGTATTA
GTTACATGTGGAACCAACTCCTGGTAGCGCAAAAACACCCCACTCGGTCCCATGGGTGTT
AGAATAAATCCGAGGTACGCGGTCGATCCACCGAGGAACAAGCAATCACAGCATGATGAC
GACACCGAGATTTGTTAACGAGGTTCGACGAACTCGCCTACTCCCCGGGGCAATGACTAC
GGGTGCTCCTCCCC