morexGenes - Barley RNA-seq Database

Contig contig_6664

Source Contig contig_6664

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_6664 (2573 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_6664

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_74840	1	2151 bp	AK361879	Available	Available	None

CDS Structure of MLOC_74840

Contig Sequence (2573 bp)

>contig_6664 2573 assembly3_WGSMorex_rbca.fasta
GGATTCATTTTATGGGTTTTGCACCATTTTATGGGTAGTCTTAAGTGTTGTTGGTGAATT
TTCGAAATTGATCACCATATCATATTGCTTTAACTTTCATACATGTATAGGCTGTGACAG
TCAAAGTTCTAAAAGGTCCAATAATCCCTGACCTTAAATTCTTCCTTGCAGTTTGTTTAC
CACAATATGCAGGAAACTGAAAATCATGAGAGGATCTGATGCAGCTGGAATAGGTCAGTT
TTTACCATATAGAACAGTACTTGCATTAGCTATAAATCATATGTCCCGTGCACATAGAAA
TTCAAATGTTTAGTGATGGATGAAAGTGGAACATAAATTAAAATATTATAGCTTGTAAAA
CACTTGTATGCAAAAATAGTTTCTCTTGGCTACCATAACTCCATAAGTGACAGAAACCTT
GGCTGATATAATAATAAACTGTTGGCTGACAGAAACCTATAGCTGGGATCTGTTGGGACC
TGAAACTTCATCAACTTATAATGTACTTTCACCATCAGCTACCAACACATTGACTGTTTA
ACCTGTATACCTGAACATTAGGTTTGTGTAGGTCATATCATTAGGTGTAACTTTGGATTA
CAAACATGCTCTGAACTAGATGTGTCCATCTGCCTGCAGCTCCAAGATCCCTAGAGCAGA
CAGGTCAGAACAAATAAGATTGACCTTGTTCCAGAGTAAAGAGAATGAACCGAGCTAAGT
TGCGATGATGTTGATGGCCGAAATTATTCATGCCAAGTACCTCAAATATCCCAAATGTTA
GTGTAGTTACACGTGTTTCTTAGACCTGTGTGTCAAATGTCTGTAATGTGATCTGTTGAG
ATATCACAATTATGAGGAAGCTCTGCACTTCCTGAATGCGAGCTCTCCACCAGTATTATT
TCGTATGTATATTCAGGTGTTGCACTAAGTGTTATGCTCTCTTGCAATTATCCAAATGCC
AAGAACTTTATGTTGGGTACTGTCAATGCTCTGCTCCGATCATTCAGCTTAATGAGAAAA
CTGCTACATTGCTGTACAATTTATTTGCCAAGCTATTGCGAATTTTTTATGAAGTTAGTG
TACAATTTCTTTGTACACCAAGAAGTACAACAATTTGACAAACCGAAGATGGCTATATCT
ATTTAATCCGATGTGCATAACTAGAACGAATAGTAAATTGCTGGTGGTGGATACAAAGCA
GAATCATGGATTTTTTTTTTCCTCCTTGACCTATCCCCCTCCTCCTGGCGGTGGACACAA
AATTCGCTGGGAAGGCATGTTTCAGGGGAAAACTGGGGATCATCTTAGCTAGTGTCAAGC
CTTGAACTGGTGTGACCCAACCAAGAGCGCCGGGCTAGACGAATTGGTAGAACGTTCTGG
CACCGCCTGAAGATTCACCTGCTTCGTTTCCATGGATGGCGGCGGACTCGCCGGTCATAG
AGTCGTCCTCGACAAGATCCGTCTCCGATCCGTCTTCCTCCTCGGCCGTTCCGCTGTGCG
ACTCCGCTGGCTCCACCCCACAGCGAACGCATAGATCCTTCTTCTTGCGCCCAGGCGTCG
CCGGCCTCGTCAACTTCAGAACACCGCGCGCGGGCCTCAGCACGGGGCCGGGGTTCCTGC
TGTCGGTCTTCCTCTTCTTGCGCCCAGAGGAAGATGTCGCCGTCGCCGTCGCCGTCGCCG
TCGCCGTAGAATTCCTGGTCCCGAGCGCGTGCCCCAGGGTCAGCACGGGCGTCCCTGCGC
CAGAAGTGTCCAGCCGCCGCTTTGAGTTCCGCTTGCGTCCAGCCGCCGCTTTGGGTTCCA
CCACCGGGCCGGCGCGCGGGCTGCGGTACACCTTGCACAGGACGGGCTCGTCCGAGGGGC
CCTCTTGTTGGCCATGGTCGAGGCCGATCTCAACCATGATCCATCCCGTCCGGATGCTCC
GGACCCGCTGGCCTTCCTCCTTGCTCATGAAGGAGAAGAACTGCCGCCATCCTATCGGGT
GGTCGCCGTCGAGAACAGGCTTGACGCCGGCCTCCGAGTGCCAACACCCCTCCCCGGTGC
CCACCGTGCGCGGCCGCCTCTGGCCGTGGGCGCTCTTGGCCGGCAGGACGGTGAAGAAGT
ACCAGGCCTTCTCGCCGTCGCTTGCCATCGCCGGGGAGTACGTCCTGGTGAGGGCGCCGG
GGCTGGCGGTGTAGACGTCGGCGTCGTGGGTGAAGTGGCAAGGGTGCTCGCCGGAGGCGA
CGCGCGGAGTGAGGTACGACTTGATGAGCACTTGGTCGGAAGGGTGAGCAGAGAAGTCCG
GGCGCTGCGCCGACTCGTCCGAGGGAACCGTCGGGATTCGGGGAATCCGGGGCGGGGTGG
CGGACGGAGACGTGCCGCCTAGGCTGGTGGAATCCTGCTCTGAGTCGGAGTCGGACTCCA
CCATGGACAGCGTGCCGGAAGTGGAAGCCGAGGCTCGAGCGGGCTGGGCCGAATAGCGGC
CGGGCCCAGCCCTCGGCGTCCCCTCTTCAGACGACGTAGAGTCCTCGCTCGCCTTTCCCC
TTGCAATCCTCTGGGGTCCGACTCCGGTAGCCGCCGCCGCCGCCGCCGCCGCC