Map Locations of contig_66637 (9127 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_66637

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74839 1 743 bp MLOC_74839.1 Available Available None





CDS Structure of MLOC_74839






Contig Sequence (9127 bp)

>contig_66637 9127 assembly3_WGSMorex_rbca.fasta
GAGTCTCCTTAAATATTTCTTGGGGTGCATGGGGGCCTCCCCAAGCTTGAGCGTTTGACA
CTCCTTTATCTTCTTTCATCATCTCTCCCATCCCAAAACTAGGGCGACGAAAGTGGAACA
AAACACCAAGCAAAAGGCCAAGCCTTCCGCCTTTACCAAGTATATAAGTGCACGAAATTT
AAATAACAATATTAAGATGATATTCAAAATATCCATGTCAACACATGGATCAACCTGCAC
CTCCAACTAAAATGCTATAAGAAGGGCTGAGAAAGCGCTATCTTAGCCAATCAATGTTTT
GCTAGGATGTGGAGGGTTATATGTTTTATCATGGAATTTCTGAAGGCTTGAAATTCAGGT
GGTAGGCAGCGATAATAAATGGTTGAAACGAGGCAACTAAGCATACCAATTTAGAAACAA
TATCAAGGTCAACGATCATCTTGCATGCCACTTCTTCTGAAGGATAAAACTTTTGCTCTT
CAAGAACGTTCTCAACGGGATCCTCGTACTCATACTCAGCACTGACACCACCCAAAAGAT
AATACAGCATCCAATGAACACACATGCAAGGCTCAATGCTCAAACAATATGATGCATGAA
TATGATGTGAATGATGCATGACAATTCTATACTAGTCATCTTTCTCATGCAATTATTTAG
TTATTACCTTTATGGATAGAACCTCAAGATTAATTGGTTGGATATGCATGAACATGAAAA
AAAATGAATGCATCATGATAAAATGATACAAATTCATATAAAAACGTCGCAAACCGAGTT
ATGGATCTCTTAGAATTGTCACTACAAGGTACGGAAGGCTATGCTGATAAAACAACATTT
GAGAGAGGTCGTGGGCAATTCCTTGGCATCCGAAGTATGCCACTGGATTGGAAACTAAAT
TCTATGTGAAATAGTCCTAAAGTTCATGCAAAACAAAGGGTTTCAACTCTCACAACGCAC
AAAGCAATCTGCCCAAAAAAGCAACATGTCACTTTGCACATATTAAAACTAACAGCTACA
ACCACCTATGAATTTCAACCAAGACATGGTATGAAGTCAACAAGGAGTACTACAACCCCA
AACGAACAACAACACATATATCATCTTGGTTCAATGGCAATTAAGCTCACATCATAGCAA
TAATATAGCAGAATAGGACTTAGTGAAAATACCAGTTTTACACAAGCACATTTATCATGA
TGGCATTTTGACAGCTTTAAGACTATGCTACAATAACTTTCATGGCATGAAATTAAACAG
GGTGATATTGGGCAACAAATACATCAATTCACTCCCACTAACCATGAGATAATAGTGGAC
ATAATCAATGATATCATCCACCCAATATGGCAAGATGACATAAACAGATTCTAAGACTAA
GCCAAATTTCACAAGGTGAATTCACAGCAGTTTACATCAACATGGCATGTTTGACAGGAA
GAATAGCTAAGANNNNAAACCTATTTTGCAAAGTAATGGCACAATTTAACACAAGGCAAT
ATGCTTATTAATTTAGACCTAACTACCCGATGTAGATGCTTGGGAATCATGATGGAAACA
GAACTACTTGAAAATGTTTTCACACATAGTCATATTTCAACATACCAAATCAGCAACATA
GAGATGAAAAGTTCTCAGCACGAAAGCCACAAATATACAAGGTTTTCATGGCAAGTAAAA
TGACCAGGTTCTAGCACTCCCAAAACACTACAACTTTCATGTTGGGAAGTTTGACAAAGG
GTGCAAGGATTGCTCCACGCAAAAATAACAATTAGGGATCATGGTGTAAAATAGCATGCA
CATCAACTTGCTCAAANNNCAAAACTAATGCCACCATTGGATTCCCTGGATTTTTCTACC
CGAAATTCTTATATCATACGCATGTGTTTCAGTAGAAAAATTAACCACAAACCACAAACA
AAAATACAATTCACTAGGTATAACCTAGTATATGCCAAATTTGGCATATTCCTTATATGG
ACAATGACAGAAATGGAATTACTCTAAATGGAATATTACCATAATAGGAAATAAGACTAT
TCCTCCAACAAAATAAATAAAATAAAAAGAAAATTCTCAGGGCCCACTAGCAAGTGGCAC
TTATGCCATGGGTGAATGACAAGGGGGACCACCTGTACGCTCCCAAACAAATGGGAAAGG
GGACTACTAGACATGAGACAACTGAAATTTTCTTTCCTATCACACTAGTCATAAGCCGTC
CGATCGAAAGCATGATGGTCGTCAGATTTGTTAGTTTGGCCGCACGAGCTTTCCTTGATG
TGCTTCATTAATTGATTGTTTTCCGTCGGACCTATAACCCCAAAAATTCCGGCCCACTTT
ATTGTAGGTTTACAAAGCAAATCAACCACCTTTTAATCACATTCCAAAAAGCTTCCGATT
TTCACGCCAAATAAAGATCAGATTCCTTATAATCATGTTTGCTTCCATTGGAGGCAGTAC
AAGCTAGCTTCCTTACTAGACACAATGCTTCCTTTATACGTTTTTTTCCATCATATGAAA
GGCATGTTTCCAGACACTTGAATTAGTGCTTCATAATTCTGTAGTTGTGTCCATTTTATA
AAATTTATGCTTGCAGAATTAGAAATCCCGCTTCATAATTTAGAATATTTTTCTCTATGA
CGCACTATCATGTCTCGTGTGCTTCCTTTTTTCATATATGATCCATGTGATATGCTTGCA
GTTTTCTTGGTACAACGTTTAAGCAATACATCAGTATACAAGGTAGGAAGCAACTACTGG
TGCTATATGTACTCATGAAGCAAGGAATCATATGTAAGGCAGCAATGTTGTTTCCATTAA
CCGGAGATTTTATTTCCATAGTGAATGAAGTATGTTTGATTAGTAAAAATTATGCCCGAC
AAAATATTTTGCCTCGAAAGAATTGCATTTTGTTTGCATTGACTAGAGAGTTTCCTCCAG
TAAAATATTAGTATGCTTTTGTGGAGAATAAAAACAATTCCACCTTCTTAGAAAACACTA
CTTCTTGTTTCCACCAAATAGAAAATTGCTTCCAATCAAATAGTAGTCTGCTTCCATCAA
AGAGAAAAATAATTCAGAAGCATCCCTCTCTTTTTTACATCAACTACATAATTGTTTCCA
ACCAAATAGCAATTTGTTATCATCAAAAGTGAAAAATTGTAACCCTGTTACAATTATGAC
ATATGTTCCGCAAAGTACAAAAAATGGCCACTGACAATTCTTTTTGCAACAAAAAACAAG
AAAAAAAGCGTACACCATTATTTTCAGTCCAATCTAGTAGCATTGTATCAATGTTGTTGA
AGAGCTCTGCATATTTTCTAGTTTGTACCAACAAGGAATCCGCTCGACAAAGTGTAGCGC
TTCATCTTGGTCATTATGCTCTAGACATCATTCAATATCCTTGATGTGTGCCTAGCTACA
AATTTTTGCTGCAAAAATGTATGTATTACAAAAACATCATTCACACATAGTGAAGCATGG
TAAGTAGTGGTTGAAGCAAAATAATTCACCACAAGAATCATATGTTGAAATGGTTGATGC
ATACACCTGTCAACCAAAATCGTTGAAGCAAAATAATTCATCACAAACAATGCACAAATA
GCCGCAACCACTTGAGATTGTTTGTGGTGGTCTACAACAGAAACATATGTGAGAAATACA
CATGCATGATTGACAACTGTATGTATCGAACCAATGTGCAATATACGAGAAACAAAATGC
ATGGATAGTACGTTTAATCTGATCAGGCTTGAATCTATATGACATGGAAAATTTTGACAT
GCAATTCATGAACCAAAAATTCCACAACAGACACATCTCTAAGAAGCATCCCAATCATAC
ATGAATACAGGGAGGAGAACCCTTACCTGCTTGTGTTGTGGATGGTGATCGGAGAAGTTC
CCCTGGATAGGAAACTAGGAATCTATAAGGATGAAAGAGGAAATAATTGCCTCCATGAAG
TTGCTTGGACAAGGCGAGGTACAATAGTAGCTCCATAGCCTGTTACTCTACCTCGCCTCC
TGGTTCACCTCTCTTGTTGACATGTTCTCCTGGATTGAATTTTGGAACGATGGGAATGAG
GAAGCGAAATCAGGTGGAAGCTGGGAGGGATTGCATGCGTGTTGTTAGGGGAGGGGTTAC
ATGTGGAGGGCACGGGTGTTAGGTGAGCCGACATTTTTTTAAGCAACCGGATAAGACGTA
TCTATGACTGTGAGATTGGAATAGAACCCACGGCAGCCCACAGGTCTGACGAAGCCCTCA
TACCGGACTATAGATAGAAAGCGTTCCCCAATGGGAAAAGGGAGCTTAGTGGTGCGACCG
GAGGAATCAAACTCATGTCCTCTCGGTCGCGTCGGCTTGGTCGGACCATCTCGTCTACGG
GGGCTCGGTCTATTGACCCAGCCACGACGTGAGATCTCTTTCCTCCCTACGGCAGGGAAG
ACGATGGCGTCACGGCGGGCACTCCGGCCATCACAGGATCTGGTGACCAGCGGCAGGGCT
GTGGAATCCTTCGAGGAACCTGTTCCCGGGGCTAGCGCGGCGTGGCAGGGGCACGATGAG
AATGTCACTCCCGGCCATGGCGTGGCCATGTAGTGCGGTCTGGCAGTGGCGATGGCTAAA
AGTGGGCGCGAGGCTGCGGAGCTGCGGGTTATTGCGCAAAGGGGGGAGAGCGCGAGGACG
GAACGAGCAACTAGGGGGCTACGACGACAAGAACCAATAGGAAAAAAGAACCTAGACCGA
AGCACCGGGAGCACGCAGATGGCATGGACGTAACGTCGTCTATAGGGCACATCAGACCAC
AAGAAAGGGCAGGGGGGAGGAGACGCTCACCTAGTGTCCACTCGACATGTAGGTGTGGCC
GGAAGGCTGATGGAGACGTTGACGGAGCGCGGCGATGTCCCTGGTTTGCAAAGCAGAGGA
AGAAGACGGCCGGGGCATCATTGATATGCGCCTTGGAGCTGCTCGGGATGGCGAGGAACG
AGAAGGCACCATGAGGATTCCTTCCCGCGACACCAGGGCGTCGGAGGCGAGGCGATGAGG
TCACCTCGAGCACGAGCAGAGGCTCGATCGGAGCATCATGGTCACGGCGTTGGCGAGATA
TTGGAGAGGCTTACTTGACGGCAGAAGTGGGAATAGAGGGAAGGAACAGGATAAGGGGAG
CCCCTAGAGCATCAGTGATACATTTTATAGGAGCCTAGGGGCACCGTCGACCGTATCAAC
CAGCCTTCGACGTTGTGTCACTGGATGTGCTGCCGTACAAAGGGACAATGTCACTCGCGT
GTGGAGGGATTGCTGGGCCGCGCGGGGCACTGGGCTGGTGTTGCATGCTGAGGGAGTTGG
TTGGTCATGATGGAGGAGTAGCCAAGGTTGGCTCTCTGTCTCCCAGGGAATCCCTTTCCC
CTTTAAAAAATAGAAACTGCAAGGGTTTTAGGAAAATAAAATATGTTTTGAACTCACAAA
ATTATGACCTATTTAATAAAATGGGTCTGGGAATTTTGGAGACAGAAAAATAAATGCCAC
TTTGGACCATCTAGCACTGTTTTTTGAAGTTCTAAAATAGCAGGAAAATAGAGCAAACCT
GAGAATTATTTCTAAATTACCAATAGAATTATTACATATTTTGCGACATTTTAAAGAAGG
TGTTGGCCAAGGCAATATTTCACCATATCACCAGATTTTGAATTAAAGAGAGGGAGATAC
GAAAGCATTTGAAAGGAGGTTTTTTCACATCACAAGCAACACTTGGATGCAAAGCACCCC
ATCACACCAACATACTTCAATTCAACTACTAGTACACAAAGGAGAAAATAAAATGTTGCG
TACATGATGATATGATGTTATGATGCAATGAAGTCATGATGCAAATATTATTATTTGAAA
CCACAAGGTGGCATAACATGGAAGGTTCACACATGGAAATATTACAAGGTTTGGAAAGTG
CACTTGGGCTGCTACAAATCTTCCACACTACAAGAGGATCTCGACCCGAGATCTAGGATT
GAAAGTGCTTGGGCTATTCGAAACACAGAAGGTCCTCGCGTTCCAAAGTGGCTTCTTTAT
TGGAATGGCGTGAGCACTCAACTTTGAGGAATTTGATAGAATTGTTGCGAGTCTTGAGCT
TGTCTCTTCGAGAATAGCAACTGGATGCTCATGATAAGAAAGGTCTGGCTGGAGATCAAT
GTCTTGGAAGTCAACGGCGCTCTCAGAAGCCTTGAAACACTGCCGGAGTTGAGATACATG
AAAGAGATCATGCACATTGGAGAAATTTGGAGGAAGCTCTACTTGATAAGTAAGGTCACA
TCTTTTGCCCACAATCTTGAAAGGACCCACAAAACATGGTGCAAGCTTTCCCTTGATGCC
AAATTTTTGAGTACCCTTCATGGGAGATACCCGGAGATAGACAAAATCATTGATATGGAA
TTCCAAGTCACGATGTGTGCTATCATAGTAACTCTTCTAACGGGATTGAGAAGCTTTGAG
ATAATCCCGAATGACACGACACATTTCTTCTGCTTTAGTGATCATGTCATTCCCAAGAAT
TTGAAGCTCATCTGTTTCAGACCAATTGAGCGGGGTATGACACTTCCGGCCATAGAGAAT
CTTCAATGGGGCCTTGCCTGAACTTGCTTGAAAACTATTGTTGTAGAAGAATTTGGCAAA
CGGGAGGTAGTCTTCCCACTTCATGCCAAAAGATATAACACACGCTCTAAGCATTTCTTC
AAGAATTTGATTGACTCTCTCCACTTGACCACTAGTCCAAGGATGGAAGGCTGTACTGAA
ATGGACCTTGGTGCCCATTGTAATTTGGAAGGAATCCCAAAACTTGGAAGTAAAGATGCT
GCCTCGATATGAAGATATAAGCTTAGGAACACCGAGCAAAGAAACTATCATTGAAGTGTA
CAGCTCTGCCAGCTAAGATGCCAAAGTAGATTCTTTGACTAGAAGGAAGTGGGCAACTTT
ATTCAGCTTGTCAATGACCACAATGATGACACCGTTGCCCTTCTTGGACTTTGGAAACCC
AGTGACAAAATCCATCTCAACGTCATCGAATTTTCACTCAGGTATAAGCAAAGGATGAAC
AAGACCTGCTGATCGTTGATGTTCCGCCTTCACTCTGCGGCACACATCTCACTCGTTCAT
GAACTAAGCAATCTCACATTTCATGCGAGTCCACCTGAAGGTTCTCTTAAGATCCTGATA
CATCTTACAAATGCTTGGTTGTATCGAGAGGAGAGAATTGTGAGCTTCGCCCATATAACT
TTTCTGAGCTCCCCTTTTGCAACCACTAGACGGTCCTCGAAGAACAAAGTGTCTTTGTCA
TCAACACAAAATCACTTATACTTTGGAATGCTCTTTGCCAAGCCTATCTTCACTTTCTTC
ACCATAGCANNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTCCAAGGTAGGAGAAATTTGA
AGGTTTGTAAGAAACCCTTGAGGAAATACTTGAAGGTTGAGCTTCCTATAAGACTCACAC
AGATCAGGCTGGAATGGCTTGAGAATGAGATTCTTGCAATAAGCCTTTCTGCTCAAAGCA
TCTGCAATCACAATTGCTTTGCCTCGAGTATAGTTAATGCATGGGTTGTAATATTGGATC
ATCTCCACCCAATGTGTTTGACGAAGATTGAGATTCGGTTCAATGAAGATATATTTCAAA
CTCTTGTGGTTAGTGTAGACTTCAACATGTCTTCCCAACAAGAGGTGTCTCCAAGTAAGC
AAAGTATGGACAACTGCCGCCAACTCAAGATCGTGAGTGGGTTAGTTTTTTATCCCTTGG
CGTCAACTGACGCGAGGTATAAGCTTTAGAACCGGAGCTGAGGTGAGCTTATCCTTGAGT
GTGTTGAAAGCCAAATAACACTCGAGAGACCAGACATATTTTACGATCTTCTGAAGTAGA
TTGGACAGCGGCTTAGCAATCTTGGATAAGTTCTCAACGAATCTTCTGCAATAGCTTGCA
AGTCTAAGAAAGCTTCGAAGCTCCTTGACATTCTGAGGAGGCTCTATCAGGACCGATTTC
CAAATAATCTTAATTATCGTAAATCAGCTATGAATGTCATCCAGCATAGAAAATAATTCA
CACTCGTAGACCAACTTGATATAGAAAACTAGTAGTACTTAATATTAAAAAGGTTAGAGC
GGAGGCCGCTCAATATTTTATTACAAACACACCCATTTTAGCATAAGGGCAGATATACCA
GAGTGGTCATGGGGTAACTCTGCTGCTCGCATAAAAGGTGGGCATGTCACATCATAGTGA
GGCGACATGGCTTAAGTACTACCACGCATCAAGCGTCAGAGTGAGGCTTGACGATTTATT
CGTGATGGCAGAAGCGGTGAAATAATACAAAGATGGACTCCATGCTTCCAAGACTGACTG
AGACTCCTTTAGGCGTTAGACTCACTGTCGTACTTTTTGTCCATGAGGTCTCCTTCATGC
ATATTTGGCCACATCAACAAACCAGTGAGTACTTTGAAAGTACTCGCAATAAATTTGCAC
AAAAGATAAGATTAATGCAACAATTCATATACATGGTTAGTTATCACAATTATCATGGTA
AATAAATTTAACAATAAGTTGAGTTATAGTGATAAGTTGGCGGTAGTCCTCCCGAAATAT
CAGAAAATAAAAAGGGCACCGATCTACTATCTGAAGCAACGCCTCGAAAGGTTAACAGGT
AAAAATTAATGGCCACCGTTGGGCATCTAAGTGACACCACATACATGGCTTAAAAATAAA
TTAACAAGCCACAGTCGGGCGTCCCAACGACACCACAGAAGGGCATAATAAAATAAATAC
TCTCCACTGTTGGGTGTCTCAGGGACACCACACAAAGGGCATAACAAAATAAATGCTCGC
CATAGTCGGGAGTCCGAGCGACATCACAGAAAGGGCATAATAAAATAAATACTCGCCATA
GACGGGTGTCTCAGCGACACCACACAAAGGGCATAAGAAGATAAATACTCGCCACAGTCG
GGCTGTTGTAAATATGCCCTAGAGGCAATAATAAATTGTTATTATTATATTTCCTTGGTC
ANNNNNNNNNNNNNNTATCCATGCTATAATTGTACTGATTTAAAACTAAAATACATGTGT
GGATACA