| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_66536
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_74794 |
1 |
1946 bp |
MLOC_74794.1 |
Available |
Available |
LOC_Os12g42370.1, FRAME:-3, EVALUE:0.0, 13112.m04449 protein GTPase of unknown function domain containing protein, putative, expressed |
CDS Structure of MLOC_74794
Contig Sequence (6402 bp)
>contig_66536 6402 assembly3_WGSMorex_rbca.fasta
ATCTTATGATGGATGCCCAATAATTATTGATTGTGTAGACTAAACATCCAGATGGTCACA
ATAGTATAGCAGTAATCCAGAAAAAAGGATAGATACGTGGAAGACGTATCAACTATATAC
AAAACAAAATAAATGAATCTATATTCTAAAATGTGCGTAAGGACAATTCTAACCGATCCT
CTAAAAATAAAGAAGGATCCGATGGAGTAAACTCTTAGTGGGGTATTTTTACTCCACTAA
ATTTTGGTCGAATCTAGCCGATCCCCTATATATATAACGGAGTAATTTTTTATTTGCATT
TAATTTTTGGCCAGAAAAACAAATTTCATTACTTTTTTATTTCATTGAACGATGTTTTGA
TACATTAAAATACGTAATTCACAATTTCTTCACTACGAGAACATAACTAAAGAAAATAAG
AACTACAAATAGACACTTTACAAGATATCCAAGTGTCATGACTACTTTCACTAGTTGGAT
TAATATTTTATCTATATCTTCATGGTTGATTCTATCTATTGGCTTCTCGAGGTTGCACAC
TTCTTTTTTCTGTGATTCCGACAAACTCAATGTTGTTTCCTCAAATGTTGGTTTTGAAAT
TCATTGCCTTCTAAATATATATAGATCTTAGTAATTAGACGCTATATATGTATGCATACA
AAAATTATGGTCTTCTAAATATATTGACTGACCATAATGTGTTGTAGACAAGACAAGTGC
TTTGTTCCAGAAAAATGATGGTGAGATGTGAGGAAAAATATAAACTTGTAATTAGATCAT
GTGTGCCGCTATTCATTTTATTTCCAACACATCTACCTTATTTTCTTGCGGGAAGCTATC
CTTTAAATCTATGCACCGCATTGTGGGGAAAATATACAATTGCACCCTTTAAACCACTGC
TGCACAAGCACAATCTATCATGACCATTACCAAGTTCAGCAGGAAAAAAATGTCAATAAA
AAGTTCAGTAGGCAAAAAAAAAGCAATAATAATAAGAATAAACAACGCCAACCGGAGATC
TTCAGCGTGTTAAACTGATGTGCTAGATCAACTACACCACGACACCTTTTGTTTTCGTTA
ATGCAACAAAGAATATATATATAATTTACTGAGACTAATTATGACGTCATTATCACTGGG
AAAAAAAGGAGCAAAAACAATTTGAGGCGTCATCCGGGCTCCAACCGGAGATCTTCAGCG
TGTAAAACTGACGTGCTAGACCAACTACACCTGGACACCTGTAAAATCATTGACGCAGCA
TATTTAATTTATTAAGCCAGCATTACCGGTCTAATTATGACGTCACCCTGGGATACACGC
CTTTTCACTGTCTAATCCTAACACACGGCACGACGGGGCAACGACAAACTGCAAAATCAC
AAAGAATGAGACCAAGGCTAACCCCTATTGGCTTTTATTTATGGGATTGATTAGAGAGCA
GCCCCGCATATCTCATGCGGTGGCTGCTTAAACGGTCAGCTGAGCCCGATTCCCTTTGAT
GTTTGAAATTCAAAAAGGTTTTATTTATAAAATCGTTAATTGAATCGATGATCCATTTTC
ATCCTTGACTTTCTCATGACGAGTTATTCGAAACTAGATTCTATGTCGATATGTTATGTC
AACTGTTTTTTTTTTTGTTCATACTTGTCATATTTTTTTGACCCACTTGCCATATTATTA
ACCACTTACTTGTCTGAGAAAAATAATTTGAATGACATTCTTTAATGTTGTTTCGTACAA
AGCCTTGTAGCAGTTTTTATTATACATGATATAAAAAAGCATGCAATAAGTTATGTTTGT
CAATTTAAATATGCTAACTTGTCGTATTTACATTCAACTTTGCCAAAAAAAAAATTGTGT
GCTTGTTATTTTAACTATGCCAAGTTATTATATTTACAAATGATGATCAAAAAAGATTTT
TTATGGTCATCAGTTTTAAATATGTTGAGTTGTCATATTTTCGCGCGTAATCGCTTATAA
AAAGTTGCTTGTGTTTGCTAGTTTGATTATGTCAAGATGTCATATTTATATGAAATTTTT
AAAAAATATGACGATTAAGTTATTTTTTATCAGACAATAAGTACTTTCTAATATGACAAT
TAAGTGTAACAAATGTGATAAGTACGAGTAAAAACAATTGTCGAAACATGTCGATGTGGG
ATCTACTTTTGAAGATTTTGTCAAAACAAAGTCAACGACGAAAACGGATCATCAATCGAA
TTAATGACTTACTGAGTTAGCGCCGAGGCTCAAACCCGGACGGGCTGGCAGCTATCTCAG
CTGCCCAGCCAACGGGTCAACACCTCGTCCTTGACAAACTGCAAAACTACTGTAAGAGAA
GGATTAACCCAACAAGGCCTAATGAGATTAACATATCCCCACCAATCATAATGGGGCCTC
TTCGTTCTGTTGTAGCGCCGTTGTTTTATTGACAAGTCCAAGTTAGTGTCACAGTCTTAG
AGCATCTGTAGTCGAACCCAAAATAAATCTCCAACTTGCACAAAGCAAGAGTTTCATGAA
TAAAAAAACCTAGCCAGGATTCATCCCCCAACCCCTCTCCCTCCCCCTCCCCCTCGTCCT
CGCTAGGGCGACTCGGGCGCTGCCCAACCACCGGGAGGGGGGTGGTGGGGGAGGGGGCGC
TCCCTTCTCCCCTCCCTCCGCTGCTGTTGGAGGCTACGCCTGGGGGCCGACGACGGTGGA
GGACTCCCTCTCTCCCACGTCTTAGGGGTGGTGCGCAGCCCTTACACGCGTGGAGGCACG
ACTGATCTAGCTTAACATAACAGAGTACTTCAAGATGATCTTCGCATACCGTATAGTTTT
GTGGATTGCTGAGAAATTACAGGACACCAGGCGTATCACATGTCACAACCCGCGTTATAT
ATGCAAGATTTGAGATGACAAACAGGACTAATCTCTGCAAGTTTGACACATTACCATGCA
AAAACTCTGCTACTCTAGTCGTCTCATCCAATCTAGCTACCAGAGCAGATTCAGCAATCG
GCACACAGCCAGACCAAGCAGCTATATTATGTCCTGCATTCGACAGCCATCTTCCCGGCA
GCAGCAGCAGCAACGGTGACCTGCGGTTGTTAAGGATGCTAGGGCCGCCGCTGGCACTAT
ACATTTCCGCTCACGCTGACCACAGGAGTACTGACGGTGGGCTTCTGGAAGTCCCTTGTC
ACCGCCGTTCCATCGCTGCCATCGTTGCTGGCCCTCCATGACCGGTCCTTCTTCCGCTGG
GGTTTCCTGTGCTGCTTCTGTGATGCCTGGTGCTGCTGCTTCTTCTTCTTCCCGGTGGCA
TTATTAGATCCTTCCGTGGCTGCCAGGTCGAAAGACTCTAGTTCACTCAAGAGACGCCTC
ATGTCTAGACCTCCTGTTGTATTATCATCCTGTTCACCGGAGTCGTCGCTGCAAGATTCA
TCAGCTGCTGACGCGGTCGGGCCTTCTCCTGCTGCAACAGTAGCAGTAGATTCTCCTGTT
TCAACTTCATCGTCCGTGACAACACCAGGAGGGAGTTCGTAGTGCGGAATTTTGCCGTCG
ATGTAGTCCTTGAGTATCTGCCGAGCAGCCCTGGTCTCGTCAGGCAGCCCGCCATGGCTG
ACATGACCCCGAGACGCGCAGTATGCCCGCAACAGCTCGGCTGCAGTCGGTGGCCGGGAT
TGTGGTTCGTACGCCTTTGGCTTCGGCAAGGTGATTTTGTAAATCTGCTCCAGGACGTCT
CTTGGGACGCGATCCGCCACCACCTGGATAGCCTCCCTGTGCTTTGTCATCCTGTCGATC
GGCAGGACGCCGCATGACACCATCTCATGCCTCGAGCTTGAGAACGAAGGGAAGACCAGA
CCGGGACAATCACACAGCATGAGCTCTTCAGAGATTATCAGTGTCTGGAAATGTTTTGTC
TTGCCAGGCGTGTGAGTAACACCGGTCTTCTTCTCGCCAACCAAAGCATTTATCGTGGAA
CTCTTCCCAACGTTTGGATAACCAACAAATCCAGCAACCACATGCTTACCCACTGATGAA
ACAGAACCGGTAGAACTTGCTTCTCGTTCCCCTTTACTAGCTGAGGTCCTTCTTTGTGCT
GCGATAGATTTGGCTTCAGCTTGCAATCTCATCAAAAGCTCTTCCCTGCCATATATCTTG
GTATCCATGTCAGGTGAAGCAGAATCTTCTTCACCACTTGACATTTTTCCTTCTAATGTG
GCAGTAGCAGCTTTAGCAGACCAGAAAACATGAAAAATATTGTGCTCCTTGAAATAATCT
GCCCATATTTTTCTGCATTAAAGCCAAATTTACAAGGACGTCATTTCATAGTCATGCGTA
TAAAAAATTAATCATAATGGACAAGGTGCAGACCTGATATTTAAAGGTAGTAGATCAGCC
TTGTTGACAAGGAGCATTGTTCTCTTGTGTTCATCAAGTTCTTTTGCATATACCTAGTAC
ATATAAGACTCATCAGATCAAGAAAAGGCTGTAAAATCCACAATGGAACACATTATGTAC
AACAACTGATTTTGGTGTCAACACAACCAATGATAAATGCACAACAGTAGGTTCAGATTA
ACATATTTTACTTTTGTAGCAGAGAACATGGAAAGTTCGTCTTAATATGGAGAAAAGAAA
AACAAGACTAAGATCACAGATCATGCTAGCAAGATAATTTGAACAGAGAAGATCTATGAG
AAGGTTGAATTATGTATGTTAGCTCATGATAGACAGAAAACCTGGATTTGCTTCGGCCAC
AAATACAGGAAACAAGCACATTCTAATAGTACAGCTGTTGCAAGCTTCCAACTTGCAAAT
ACTTGCATCAGAAAATTACTAAGCATGTGGTCTCTAAATGAGAATTCATGAACAGCTCTT
CCGGACCAATTTTACTACTATTGGCTTCAGTGCACAAGACTGGACACTGGACAAACTTAA
ACCAGGGACAAGCTGCAATCATTTTGCTATCTGTAGTACATCTTCCTTGAGTTAACCAAA
TTACTACAGGAACATGATAAGAAGTACCTCAAGATCAGGACATCGGTAGAATAAGGGATC
TCGAGCATCAACTACCATGACCAGCTTCATGGAAGAAAGAAAACAATAGTCAGTACTGCT
GCATGATATTCATTATGAGTTGCTTATCTTCAATCAAGGTACAGTAATAGTATTGAGTAC
AACAGAGTAGCATATCTACAGGACAGGACATATATAGTAAGAGTACAAGTTATGTCAAAT
CAGCGTCATTACATAGCACAGAAAGAGCACCTGTGACCTTACAAATGCATCTGCTACACA
TTTCTTGGAGAATATAACGCAGCGGATGCAGTCAAACAAAAAAATTGTGCTAAGACCTAA
CAGTTGGGATCACAAGACCAGTAGCCAAGCAGCGAATCACAGGATTTATGGGTAACAATG
GCAGTGAAGGTGGAGCATTACTCACCAAATCGCTGCGTTCAATTACTCTCCAGAGCTGTC
TCCAGATGTCAATGTTCTTCTCGAAAGGTGTAAGGACAAGCTTGTCATTCTCTTCCAATC
TACGTACAAGAATTGGCCAAAGCATTTAATATGTCAAATGGCAAAATAAGACACAGTAAG
CACCGCATTTGTAAGAAAAATGACTGTCACAACATACGGAGAAGATGTACACTGATGCTT
ACGCACGCAATCTGTGAGAAGAATCCATAACACAAATACTCAAAACATGGTACTACTACT
ACTACTACTACCAAATACCATTAGTCCATTACCAGTTCCATACAAAAATCAATGGTATAG
CTAATAAGTTTAGCTGAGATTATCAGTCCTACAACATGCATTTCGCAGCCGAATTCTTAT
GAAACTAGTAAGTTCCGAATCATAATAAACCGAGTAAAAACACAACTCAGTAACCAACCT
CGCAAGATTCCTCCGCCACTCAAGGAACGCCTGCCTCTCGCTTGTGTCGAGCTCCTCCGC
GGTCATCCGATTAGTCCACGGTGGGCTGCAATCACGGGTCACACACACAGCGTCAGACCA
AAACCACAACCCCTAAATAAACTCAAAACAACACAACAATCACGCCAGGGCCGATCAGGA
GCCGCACTCACCGCCTCGGGACACCCAGGCTGTTGGCGTGCAGCGCCTCTTGCTCCTTCC
GAAGCCTCCGCCTCTCCTCGGCTGTCTCGCCCGTCGCGTCCCTGCGCCCAATCAATCCAA
CCATTTCAGACCAAACACCGTTCCAAGTTTCCAACCAATACAGCCAACCCGGAACCAACG
AACGTATCTCACTGGACGGGAGGGAGGGGAGGCGGCTCACAGGTCGATGACGAGGTCGGA
GGAGGCGGCGGCGGCGAGGGCGGAATGGAGGCGGTCCTCCTCGGCGGCGCGCTGGAGCCT
GGGGGGGGGGTCGGCGGCGGCGGTGGAGGGGGCGGGGGGGGG
