Contig Data
morexGenes
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Map Locations of contig_66533 (6442 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_66533

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74792 1 762 bp MLOC_74792.1 Available Available LOC_Os01g73140.1, FRAME:+1, EVALUE:9e-52, 13101.m07983 protein ubiquitin-fold modifier 1 precursor, putative, expressed
MLOC_74791 1 1639 bp AK375567 Available Available None





CDS Structure of MLOC_74792






CDS Structure of MLOC_74791






Contig Sequence (6442 bp)

>contig_66533 6442 assembly3_WGSMorex_rbca.fasta
TGAGCCACACATAGATATAAAATCTCCCTTTCCTTCCATGCTCATTATGCCTTATTTTCC
AGGACAGACGAGAATGCAAGCTTGCTATCTTTATTGGAAAAACACCTGAGTCCTTCCCCT
TGGAAGGACGAGCTTACACCATATCGCAATACTGAATTGCGTGATTTGAAACTGTTCATT
CAGAGGTCTGCCAAGGTACCACAGTCTAGTTGCCATGTGTCTTCCACGGTTATTGGTATT
TGGTCTAAATTTGCATAAAAATAACTTCTCTTTTTAACTTTGCTGTAGGATTCAAAGTCG
CCACACCGTCAACTGAATATAGAAGAGCCCTTCCGCCCCCAACTGAGGGGCACTCTTATT
CTCGAGTACCCAACTATCAGCGTCTTCCTTCCATCAGATAGTTACGATTTTCGATTGGAG
AAGCTTGCAAACAAGATTAGTAGAAATGAGCAGCCCCCCAGCAGCTCGAATGATAGTCCT
CCTCTAGAAGGCACCGAGTTTCAGGAGGAAGAAATAGAGGAAGGTGAGTTCGCTCCAGAG
ACGCAGGTTATCGATCTCAGGGATTGCGGACCTTCACGTACCACAAACCTTTCTCAAGTG
AAGCTTACGAGTGAACCTAAGATGGATAGCATGCTGTCGTATGTCCATGGTCTGGCATCA
GGTGGTAAACAGGGAGAAGTTAGTCAGCATGGCAAGATGGCGTCGAGCACAGCTCCTGGG
GTTCCCGAGGCTAAATCCTGCATGAAAGTCTACCCAGTGGACTTGGACGATGGTGTTGAA
GGTGGGACTTTGGAGGGGCAGGTTATAGACCTCGAGAACCATGCAACTTCAGATCCTGGC
AATATTGGTCCACCGAAAGATATGAATTGCGAGACAGATTATTATTCAGTCCTGTCTCCT
ATCAGCATTCTAGCATCTGAGGTCTCGAGTCGTCCTGAGGAAGAAGGCAACCAAGAAAGC
GGGCTGCCACCGAAGAATGCAACTCCTGAAGCTCTGAGAAAGAGATCTCTGACGAAGGTC
TACCCGCTGGACATGGACGACGATGCCCAGGGCCTGCTGCTCTCGGAGCTGCCCAGCGTG
GAGCTGGAGCAGGAGATGGGGGCCGCCTACGAGGAGCTGTTCGGGGACATGAACCCCGAC
GACTTCCTCGGCTTTGACCTCGGGATGATGGACGTGGACGACGGGTCCGGCGGGATGACG
CCTCCGCTCAAGCTCTGGGACGACCTGGACCTGGAGGAAGGTGAGATCCCCTCGCAGCCG
TGAAGAAGAAACCTGGGTGCTTGGAACTCGACGTGAGAGCTTGGAATTTGCTTGTCCAGG
AGTGTTTCTGGAGATCTGTTGGCTGTAGCACCACCTGAGAGTTGTCGGGTGCTATTTATT
CTTTGTTAATTTTCCTCTGGTCCCCGTTGCCGGGGCGGCGTCGGGGTGCGTTTCGAGGTT
GAGCTTGTTTGCCCCTCGTAGCTGCAGAAACTTTGAGGTTGTGACTCTGCAACTGCAAAG
CTCGTGAGTAGAGCAGTCCTGAAGTGAAGCCGGTGGGCGTGTAATATCGATCGATGAGAG
TTGTGTGTAAAATGTGGAATCGCAAAAGCTGTGATGTTATCTATGGACGCATCATCAATC
TGTTGCTGATCATAGAGAGATATTTTGTTGTTTTTTCACCATTGCTGAACCTGCAGTTTT
CCATAGCCTTAACTGAAGCATGTTCAGGTTACATACAGTGCTACACTGGTCTCGTGTCTG
TTCTCGCCTCTAGCTGGAGAAGGGAATGTGTGTGTGTGCGCGAGAGAGAGAGACGCAAAC
TGTAAAATGTTTCTTTATACAAATATATGAATTTGTCCAAAATGCATTTACTCTCGAGAT
ATTCGTCGGATCTGTATAAATATTTTCTTGCACGGACAGAAAAAAAATGAAAGAAATGAA
AAAGTAGTAACATATTTTTTAGTCAAACATTATAAAATTAAGAGTGTGCTACGCGTCAGC
CGACGGATCTTTTTAAAATATCCGTCAGCGTCATTGTTGCGTTGAGAGATTGCAACAACA
GGCTAGTTGTAAGAACTTATGATGATGGTCATGAGATACGTGGCGTGTAGATAAGAGGGC
GGACGTTAGCCTGCGATCCGCTGGATGAGTTAACGTTTCCACGGGGGCTGCTACGAAAGA
TCAGTCGGGTCACGAGCCGTCCGATCTTGTGTAATCGAGTGGCCGAACGACGTTCTTCAC
TTTTGCAATAGAGTTAATGTTGCGGAAACATTTGCATTAAAGGTTGTGCCATAAAAACTT
TTGAAACAGGTTCCGTTGCAGAAAACTTTTGCAACATAGATCAAGTTATAGATTTTTTTT
CTTCGTCTTTTTGCAACATAGGTAGTGTTGCGGAAAGCTTTTGCAACATAGGTGAGGTTG
TACAATTTCTTTTCTTCATCTTTTTGCAACATATGTACTGTTTTGGAAGAAACTTTTGCA
ATAAAGGTCAAGTTGCAAAAAACTTTTGCAACATAGGTCAAGCTCCAGAAAACTTTTGCA
ACAAAGATATTTGCTCCAATTTTTTGAAACAAAGACCAAGTTACAGATACTCATCATTGC
GCCTACTTGCACTAGCTTCGTCGTTGTCAATCGCAACAACGTCGTTGTTGCAGAAACTCA
GTTACTTATCTGCTCAAGGATGAGGCTCGAGCTCGGGACGAACCAAGGAGGAGACGCAGG
GCGCCGGAGTCTAGGACGTTTGCATCAGCTCCGAAGTTGGTTGGCCCAATACAGGACACG
CGTCTGGTGGGAGAGGCGGTGGATGGGATCTTAGAAATCGACCGGCTATCGGCTGATGGG
AAGAGTTTTTCTAAAATTTAACCAAGTTTTAAAAAACAATCTAAACTTTTACTATAAGAA
AATATATATGGCATGAAAATAGATTGAATGGCGATTCCAACTGTATTTGATTTGGTATTA
TGTATGTTAATATATTTTTGTACAAACCTGGTGACTGGAGGCAAAGCTAATATGCGAAGT
AAATAAAAAGAAATTCTTACATAAAAAGAAATATGTCTTTATACAAATACCCATCTTTTA
AAGATTTTATTATGAACTATATGCAAAATATGTATATATACATCTGTATGTAGTCTATTA
AAAAATCTATAAAAAGTCTTATATGCATATGTAGGAACGGAGGGAGTATATAATTTGTGC
AAAATACATTTACTTTTGAGATATTTGTGCAAAAGTAGTAACCTAAAGGGAAATTCTTAT
ACACAAAAAGAAGGGCTAGCAGGACTCGTGAGGCGCATCGCATCGCATCGGCCGAAACTC
GTGAGGCGCCAAAACTCTATCACGCGACCCCCGGCAAGGCGGCGGCGGCGGCGTCTCGGC
ACCGGACAGCACACCCATGGCGGCGGAGGGCGGCGGCGGCGGAGGAGGGGGGAAGGTGTC
GTTCAAGGTGATCCTCACCTCCGACCCCAAGCTCCCCTTCAAAGTGTGAGTAACCGCTCC
CTCTCCCTCCTCTCCTTCCTCGGGCCAGATCTCGTCCTGATCCGCGTGTGTCGTGCGGTG
GCTTTCGCAGGTTCAGCGTGCCGGAGGCGGCGCCCTTCACCGCGGTGCTCAAGTTCGCCG
CCGAGGAGTTCAAGGTCCCGCCCCAGACCAGCGCCATCATCACCAACGGTACGCCCCCCT
CCCGCGCTAGCGACGCCGCGTCCTCTCGTGGGATCTCGTCGATACCGTGCTCTTCTTGGT
TGCTCTGATGCGAATTACAGCGTCCTCCACAGGGGTCTAGAGGGCAGTGATCTTACTGGG
GAAGCCATAGACAGTCCGAATCTTATCTGCGCCGGTGCTGCTGTTCCGCGGAATCAGTCC
TCTCGTTGGAACGGTTGATTGACGATAGTATAGGTGCCGAATATGCCTTTGAATTGGGGA
TTATTTTTTTGCCATCACTATCTATTGTTGCCGTAGGCGAGGAATTCAGTGGCAAGTTCG
TATGCGTGAGCAGACAGGGAAATTCATAGCACGACATTGGGCTGACGATACAAGGCCGGA
TTAATGCTTCCTGTGGACGACTAGCGCTGCTTCTGAGATTTTTGCTATGTAGGATTTGGA
TAGCACAAACGCGAACCCTTGACCCTTGTGGTTTCTATTTTGCTTTCTGGGACACGTCGT
CCGAGCTTTTCTAGTCATAGTTGTCACTTCCTGACCATATATGTCCTAAACCTTATGAGA
TGGTCGGCATGGCCCGTACATACCATCAGACTTGTGGCTATCACATGTCTTTCCATTTCT
ATGTTGATGTGGTGATTATAAATGTGGAACAACAGTCCTTGGCTTTTCCTGTCTTAGTGA
ATTCATACATGATAACCTCATTTCGTTGTTAACTGAATATTTCAGCCTGTCAAAGATGTG
ATTGTAGATCAGCACACAAGGATATATTATTTCCTGGCTTGTTTGTTTTTTACTTTACAG
AAAACCGGCAGTATGGTTTCAAACTGTTAGTTTTGTTGCCTATTGGTGGTGAGGGTTAAC
ATAGTATCACGAGCCTTTAAATTTTTAATGTCAATGCCATTTGATTATGAGCTGTGAGAG
CTTGTGGCTAGTTCCAGGTGCTTAGGGCAGAAAAATGTTGGTTCATTATTGTCTTTCTTG
CTCGTTTGTCATTCATAATGTTTTTGAAATAATGTTGCATTTCTCCCCACTGCAGATGGA
GTAGGCATCAACCCACAGCAAAGTGCAGGTATTATTTGCAGATACAAATGCTTTCATTTT
ATTTCAGATCTTTGCTCTTTCCCAGTTCGTTCTATCACTCACAAGTTCTCTAAGATATTT
TCCACACGCTATTTTGTTCCATAGAAATATTTGAATTACTGGATTAAGTTGTCTTCTAGG
TTATATATAATACTAGTTTGGCTGTTTGAGGCCACTGATTTTTTCTGTGTGTCTTCTTAT
ATTGAACCATTTGATTTGTGCTGGTTGCCCGCACTAAAATTGGCCACTAGAACTTAAATG
AGGTGACCAGCTTGACACGCATCAAACACTGGATATCATTTCTGTGACATATTTACATGA
AGTGAAGTGCATATCTGAATATGCCTTATATTTAGCTTTGTGGTTCTCTCTTTCTCAAAC
TTATGTCTGCTGTCAGATAAGATATGTATCTTGAGGAAACTCACTGTTATTCTCATTTAG
CTTCTTTATAATCTTCTCCCAGCCACCTTCTTGAGATTGCAAGTCGTATACTGTATATTA
TGTACTCCCTCTGTTCACTTTTGTAAGACGCTGTAGACATTTCAGATAGCGGTCCAAACA
GTTCTATGTCAGCTGTCTGAAACGTGTTATAAAAATGAACGGAGGGAGTACTTTAATTCT
AACTAAAAGGACACAACTTCCCTTTTCTTCCATGTCCCCTGATGTTCCATGTCCCCTGAT
GTAAAACTACTGTTCATTTTCCAGGCAACGTGTTCTTGAAGCATGGCTCGGAGCTGCGCC
TCATTCCTCGCGACAGAGTTGGAGCTACGGCGGCGTCTTTCTAGTCATTGTTAGAGTCAA
CAATGAAGAAACCTATATATAACAGGAATAAAAGCATGTCGATGCTCGGTTGTATAATGG
ATGTAACATGGTTGAGTATAATTTGCCACCAACAGCCAGCCCTATGATTGACAGGATGAA
TGCAGTTTGCCAGACAGTGCCATGTGCTCCTGTCTTTGTTTGCAGCCTCTGGTTTCCTGG
TAATGCACGCTCTTCAAAATCAGGGAGCGTTTGCTTGCAGTGTGGACTTTTTTAGAGAAA
AATACGCGGATATTTCATTGTTGAGGGAAAAAAAGACATTGACCTATGTTTTGGCCCCTG
CCTTCTTCTGCTCTTGCGACACCTTTGCCCCTTTTCGGTCGTCAGCCAGGTCGTGCACGC
ACATCGACTGTTGCGGGACACAGGCAATGCAGGTGGCGATGATGTGGTCATGACCTATGC
AGCAGAATTTGAAGCCTGAAATGACATGTTTGCGTCAGTGATCCCTTTGCCTATGCAGAA
TCGACCTGATTTAAATTCTCTGTTTAATAAGTGCAGGATCGAAGTAGAGTGGTTTGTTGT
TTCCCAAAAATGAATATTTTTGGATGGAAGTTAGCTTCCAATGCGCTCGCAACTGTTAAG
ATTTATTACATAAATGTTATTAGGGAATCTCCTCCTCTCCCAAACCGTCGGACGGTTCTC
TTCCTCAACCGACGCTTCTCCCGCTTGTCTGGAACCGACGTCTCTCTGAACCGTCGTGTC
CTTCTGGGTCATATATATTGCACCCTGTAACCATCGATGTAAAGGACTCGTTCATTCGTT
GATTTAGAACACGTTATCAACACGAGTCTATTAGAAAAGAGCGAATAGAGAAACAGAGAA
GGGAAGAAAGACTCGCCGCTGTTTTTTCTACGGGGACAATCCGATGGAAGAGGAATTATG
CCTTGTGGACAGTGGTACCACA