morexGenes - Barley RNA-seq Database

Contig contig_6634

Source Contig contig_6634

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_6634 (2716 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_6634

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_74684	1	1483 bp	AK372459	Available	Available	None

CDS Structure of MLOC_74684

Contig Sequence (2716 bp)

>contig_6634 2716 assembly3_WGSMorex_rbca.fasta
TTTAGGAATGGAGGGAGTAGCAAACGATGCACTCACGTGTGATCTGAGCAAATATGCGCT
GGGTTACCAAAACAAACCAAAGTGCGTGCAAGTTAATTAGATTGAAGTTGGTTTGAACTG
CATATTTGCACACTAAAATGATCCTTCGGTAACTCATTTTGCTAACACTAGTCTGTTATT
CTTTTCAATTAGACTGCTAAGCAAAGTGTATAAATAACTTACGGGACCAGTGTAATCCAA
GAGTCTTGTGCAATAGTGTTCTGCTTCCTCAAACCTGCCCATGTTCTTGCAATGCCTCGC
AAGGAAAAGCAACGCTTCAACAAAATTCTGGCCCTGCCTTTCCTCAACTTCCATTCTCTC
TAAATCCTTCTTGTAGTAAAATGCAGCCTCCTCAGCTTGCCCAAGCATACTGTGCAACTT
TGCCAATTGGTGAAGTGCTATTCCTTCAGTGTCATTAGTATTTGCAGCCCTCTCATAGCA
CTTGATGGCTTCTTCAATCATTTGAAGCGGATCACTCTCATAGCACTGAGCCATAGCAAT
CCAAAGGCGTGCATCGTTAGGTTGCAGGTGGGATGATTTTCGAAAATAGTATAGTGCATA
AAATGGCATTCCCATCATCTCATAGATCTGACCAAGACCGTACCAAGCACGGTAATCTCT
AGGATTTATATCAACAGCTCTTCTGTAGGCATCAATTGCAGCAGGCGTATTTTTTAGCTC
AACAAACTCATGTCCCATGAGAGTCCAAGCTGAGAGGTACTTCCGGTTAAGCTTCAGCGC
CCTTTGGAAATACAAAACTGACTTCTCATGCTGTCCCTTCAAACTGTAATAATTTGCAAT
TATGCAGCAAGATTCAGGGCGATATTTATCTGTCAGAAACACCCTGTGAGCAAGGAAGCT
CAAAGCAGTCAAGCTTTCTTTTGCATACAATAAATTCGAGTAAATATCCATAGAATCCAC
ACGAAAAGGGTCAGTTCTGAGGAGTTCTTCAAAAATCATGTCAGCTTCATCCAGGTCCCT
CATACTATACTGAACGGTTGCTATTTGAGCCTGAATGTAGTCGCTGCAATGGAAGACCCC
CATCAAGCGCTCATATCTTTTCAAAGCTTCTTCGTGCATCTTTAATTCCAGATGTGCACT
AGCGATAAAAAAATCTTTCATCCAGTGATTCTTCAGATTTAAGTTGTTCAGAATGTCACT
GCTAGTGCACAAAGACTGTATCTCTAACCAAGCACACCAGTTCCAAGGGTAGCTATTCAC
AGATTCTACCAGAACTGTTCTAGCCATACCTTCACAGCCTTTATCGCGTAGAACAATGCC
ATACAAGTACAAGCCAAAGGAATCAATAGCACCAGTTCTGCGATGTGTTGAGAGCTCTCT
CTCCAATGCAACAAGTTCCTTATTAACAACATTGCTCTTCCCCAAAGATCCTTCCAGCTC
TATTGTCTCTTCCTCTTTTCGCTTCTCTCCAGCCTAAAATGCAGAGCAAATAACAAGGTT
CATCAGGCATATCAAATAAATACTAATTAAACTATATGGAGAAATGGACAGTTTCTGCAA
GGGAAAACAGGCTGCAAGAAAAGAGGGGAGAAATGTGCTCCAGACATGGCCATCGTTCCA
TAGGCCAAAAATATGGAAAGTTGGTGTGTCGCAGGCAATCTTACTAAAACACTGACACAT
AGTACGATGCTGGAGCACATTTCTCCTTACAATTTGGAATCTCATGCTTGTTTGGCAAAC
GAAAGCCAAATAATATGTTACATAAGCAATTTCTGAGCTTCCTTGCGGAAGAACCATTGT
ATTATCACAAAAAAGTCATGCGTGTAGATATACAATATCTATCATCACAGCAAGTACTTA
AAGTACAAAGAGTTAGCCAATCATCTTCCAAACACATTGAGAAAAAAACCTCTTGATAGA
CAAAAGGAAAAAGTAATAGACATGAACAAGAAATGAGTAGACATTTTGATGTCTGACATT
CAATCTAGAATTTCATTGAAGAGGCAAAATAAGAAACCAGAGGCTCCACACAATTTGCTC
CAGCTTCTAATAACCATGACAAAAGCAACAACTGAAGCATCTCTTCTTCGACAAAGTGTT
CCACTGCCCAGCAATATTAATGATCAGATTATGCATCGAGGACCACACAGCACCAAAAAA
AATCACCATCAGTAACAGCAAATATTGAGGATTCCACTTATTGAGTTATTGACTTCACCA
AAATCAAACTAAATCTTCTATTACTCCATTTGCAAAACAAGGAGCCCTAACGAGCATCCA
CAAAACTTCTACAAAATGTCATTTCCTCAATTGGAAACTCAGAACAATAACCAAATCTGA
ACTTTACTGTACCAGTTCCAGTGAAGCATTTCATCAAACAGCACACGCCCTACCCCAAAT
CTGCAAACAGGAACGAGTCCGCTCGAAAGAGTAAACAGGAGGTTGCCCATATCATGTCTT
ACCATGTAAAGCGCGTAGCACCGCAGGAACACGGCCTTGCGCCCGACCTGGGAGCGCAGC
ACGTGAGCGGCGCGCCGGTACTCCCGGCAGTCGAAGTAGGTCTTTGCGAGCAGGTACTTG
TCGGCCCCTGCGTCGAACGCATCGTCGTCCGGGATGGGCGTGCTCACGTACGAGACGCCG
CCGAGCGGCGTCCCCGCCTCAGCGGCGCCACCGCCGCCACCGCCTCGCGTGCGGCACCGG
AAGCTGGCACCGGCAC