morexGenes - Barley RNA-seq Database

Contig contig_6633

Source Contig contig_6633

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_6633 (2367 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_6633

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_74679	2	1652 bp	AK366296	Available	Available	None

CDS Structure of MLOC_74679

Contig Sequence (2367 bp)

>contig_6633 2367 assembly3_WGSMorex_rbca.fasta
GGCCCAGGGCCGCCGGCGCCGAGGCCGCGGCCGAGAACTACGCGACCGCGCTCACGGAGG
TGGCCGCCGAGAGCGACCTCCTCGACGCGACCGTCGCGGACATGGAGAAGCTGGAGAAGA
TCTTCGCCGAGGAGGCCATCGCCGAGTTCTTCGACAACCCCACCGTGCCGCGCGAGGAGA
AGACGGCGCTCATCGACGAGATCGCCAAGTCGTCGGAGCTGCAGCCGCACACCGTCAACT
TCCTCAACGTCGTCATCGACAACACCCGCGCGGGCCTGATGCCGCAGATCGTGCGCGAGT
TCGAGACCGCCTACAACGCGCTCACCGGCACCGAGGAGGCCGTCGTCACCTCCGTCGTGC
AGCTCGAGTCGCAGGACCTCGCGCAGATCGCCACGCACGTGCAGAACATCACCGGCGCCG
CCAACGTCCGGATCAAGACCCGCCTCGACCCGGAGCTCATCGCCGGATTCACCGTGCAGT
ACGGCCGCGACAGCTCCAACTTCATCGACATGAGCGTCCGCAAGCAGATCGCGGAGATCA
CCTCCGAGTTGGAGATGCCCTCCGTTAACCTCGAAGTCTGATGCTTAGGTCCTCTTTTTT
CTGCCGTCTCTATACATCTTCTTCTGTATCATTATTATCCGGTGAAATGTTAAAATACAT
AACTTGGTTCCAGCATCTGTAGTTGTGTCAACTCCTTTTGAATTTCACAGGAGAAATTTC
TGTACTGTGTGCTGTGCACAAGAGGGAAACCAACCTGCAAATCAGATTGGAACTACTACA
ACCAAAGGGGAAACGGAGACACAATTTTTTGTTAGATTGTTGTCAGTAGAGTCAAAAGGT
CCATGTACACATATGCACTGCATAACCTCGACAACAAGTGTTTGTTTATACGGAGTACAT
TGTAACTTGGAGAGCGTTATCTCTTTACAATTCAGATAAATTCAGTCCACATCAACACCA
ATGTCACTAGTTTGAGCGTTTGCAGCTGCAAACGTTTGCTGCATTAGGAATGTGCATTCG
TAGAAGAATGTTCTTAAGCCTGAAGTTCCAGTCTTTCAGTTTAAATTAGGTGAACTGCCG
GCTTATCTTTTGAGAACTATCCATTTAACATTTTAACCTGTGATGGTTTTCCATTCTTTT
GCAGTAATTGCTGTCACAAGGATTTGCAACACCCGATAAGAGCGTTGATCTTCTTCAGAC
CTGGAGATGTGACGGAGGGAGGAGGGCATTCTTTTCTGCAAAAAATAGTAATGACATAAA
TCATTTTTTTGGCAGGAGCCAGCCATTGTAATTTCTTTTTTGCCTTTGTGCTGTTGAGAT
CTTGTAATAACAATATGCCCCAAAATACTCAACTATAGCAGAGTTCGCTCCTCCAAGTTC
AGGCAATGAAGTTTAACAACATGTATAGCTATGTATCCGCCGATGAAGTTGTTTGTAGAC
GTGTATAGGATCCGGCATTGCTATCAAGTGGCAGCCAAGATCATGTTGCGTTCTGTATTT
CCGTTTCATCGTGTTCATCCATGGCTTACACTCAAAAAGGCGTCAGGTGTAGCTGTTCAG
TTGTTTTGCTTCTGCTGCTCCTACAAGTACGCAGTTCTGTGTCTTTGCCACTCTGCTGTG
TAATTGTTCTGAAGTCCCATCCCCAATCAGTATTGTGTCTTCCTGCATTGCTTTAGTCAT
GGCCACACCCTTCAAAGGAGTTCTGTGAATTGTATTCATGCACTTATCTACTCCCTCCGT
TCCAAAATAATTGAGTTCTAGGTTTCTCTTAAGTCAAACTTGTTTAAGTTTGACCTGCTT
CTACAGAAAAATGCGGTAAGATCAACGGTCTTATAAAAGTTTACAGAGAGGAGTATTTCA
TAAATAATCTTATGAGACTAATTTAGTGCTCTAGATATTAATATGTTTTTCTATAGACGT
GATCAAGGCGGTCATCATCATAAGTAAGGCATGTGGCTTCTCGGACATCTGGGAGATGTT
TAAGCCCACTATATGACAAGACGTTGGCTCCTTAACCATGTGCGAAACCTGCAAAGGATA
TGCAAAAATAACACGTCCAGGCTGAGTGTAATTAGCATGATATATAGCTTAATTAATGAC
CATCAGCACACCGGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGTTG
CGTGTTCGATTCACGTCGGGTTCAATACCCCCGATTCTAAACTGGTTCCTTTTTGGAAAA
AGTCCAAAAAAAACCTTGAACTGGTAGACGATGATGAGATCGAACCCTGAAGTGGTAATC
CCGGAGGGCAGTCAGTGAGGGAGAGCACGGTGACGGCGGCGTGCGATGTCTTGGTCTTCG
TGGGCATCTTCTGCTCCGGGATTCCGT