morexGenes - Barley RNA-seq Database

Contig contig_6626
Source Contig contig_6626
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_6626 (9171 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_6626

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_74648	2	3350 bp	MLOC_74648.1	Available	Available	LOC_Os08g30740.1, FRAME:-1, EVALUE:0.0, 13108.m03182 protein ABC transporter, ATP-binding protein, putative, expressed
CDS Structure of MLOC_74648

Contig Sequence (9171 bp)

>contig_6626 9171 assembly3_WGSMorex_rbca.fasta
GGTCGTGCCTCTCGAAAAGGGGAAAACATATTATTTTTTGTTTTTTTTTCATGAGAGACA
CGGTTTTTCTTACACGAGAGGCATGATTTTGCCCCCGCGAAAGGCATGGTTGTGCCTCTC
GAAAAGGAAAAAACACGTTTTTTCATGAGAGGCACGATTTTGCTTTCGTGAAAGGTACAA
TTTTCCTTCACGAGGGATATGAAAAAAAAGCGTTTTCTATTTTTTTCTATCACGACAGGC
ATGTTTTTTTACATTTTTTCGCAAAAAGAAGTTCGTCAAAACCTATCAACANNNNNNNNN
NNNNNNNAGATCTCGACGCGAGAAACCCAATGGTGAAAACTGTTCGAGATTTGGACGCAC
GGTTTACCCGATAAAATATTTTAAAAATATGAATCTACGAAAAAAAGGAAAAACTCCCAG
GTTGCGACAAGTGACACACATGCAGTACACCATTTGTCGCAACCTGGAAAGGTGGAAGTG
ATCTTTGAAAAATGTTGAACAAGTGATTGAAAATTTTAATTCAGCACTTGGAAAATGTTA
AATGTGTATAGAAAATATATTGGCCATGTGTTAAAAAATGCTAATTTTTTTATCATGTAT
ATAAAAAAGTTAATTATCAATATGAAAAAATGTTGAAGAAGTATTTGAAAATTTTCAATC
AAGCATTTGAAAAATGTTAAATGTGTCTAGAACATAAGTTGATCATGTGTTATAAAATGT
TAATCTTCTATTTGAAAAATATCAATAGAAAAATTGAAAATGTTTAGAAGTATGTATGGA
AAAACTAGTGACCATATATTAAACGAAATTCAATTTTGTATTTGAAAATGTTAATGAAGC
ATTTAAAAAAATGTTGAAAGTGTGTACAGAAAAATGTTAGTCATGTATTATGAAAATGTT
AAATTTGTATTAAAAAAGTTAAATGTGCATTATTATTTTTGACATATATGAAAAATGTAT
AGTGAAACCAAAAGAAACACAAGAAAAAACAGAAAGAACCATAAAAAAGAGAAACCTTAT
ATTACAAATGTCTGGAATGTATAAGAAAAATGTACGATATGAACAAAAGCAAGTAGACAT
CAAAACTTATATTTGAAAATAAAATCTTGATCACGTATTTGAAAAAGATTAAAAGTTTAT
GAAAAAAAGTTTTAGATATATCCCAAAAATGTACAATGTGCATGAAAACAATAGACATCA
AAACGTTTATTTAAAAAATAAATCTTGTATTTGAAAAATATCAAGAGTTTTAAAAAATGT
TTTAGATATACACCAAAATGTACAATGTGTATTCAAATATCTAGACATAATTAACCATGC
ATTTTGAAAATGTTAAACGTGTAATCCCTCTGTTCCTAAATTTAAGCCTTTTCAGATATT
GCAATACGGACTACATATGAAGCAAAATGAGTGAATCTACCATCTAAAATATGTTTGCAT
ACATTTGTATGTAGTCCGTATTGAAACCTCTAAAAATGCTATTATTTAGAACAGAGGGAG
TACATAAAATATATTCCTGATGTATACAAAAATATTGAATATGTACTGAAAAAAGTTGGC
ATGTGTTAAACGAAAAACAAATTAATGAAAATTGACAAAGAAAGAAAGAAAACCAATGCA
AAAGGATGGGAACGGTAAAAATATGATTAGGAAACAAAGAAAACCGAGAAAAGGAAAAAC
GAAGAAAGAAAAGCAAAAAGAAAAACAGTGAACCCAAGAAAAAAAGATAAATGAGGAAAA
AAAAAGGAAGCAAGAAATACCGGTGGGAAAGCAGAAAACCTAAGAAAAACCCGTGAAGAA
ACAAAAGAGAAAGCAAGATATAGCTCTCGCGACCATTAACTGGTTGGTTCCTTGATGTTT
TCCGGTGCAGGCTGGGAGAGTATCAAATTACACTTCACTCTCGAAAAGTAACCATTGATA
CAATCCTGAATCAACAAATCGACTCGCTGTAAACATACTGTACTTTTCAACCTACCTAAC
AATATGTGTCATCACATTTGCCACAAGACATCAAAACAACATCAAGCCATATATGATATA
TCTATCACCAAGCCCTTAATTACCGACGACACAAGATAACACATTGATCTAGTACAAACA
TAATGTATATCAGCAGCCTTTCTATACTTACAATCACCCCTGAGATAGTTCACACGAAAA
ACGACCTTCTGCATCCAAGCTCATCATCTTGTTGTCGGGACCTGGTTTGCGTCAATGACG
TAACCTACGGGGCCTCCACGGCCGACCGACGCCCTACGCGAAAGCGAGGGTGGCCTTGTC
AGCTCCACATTTGCCGGCACAGGGGTTTCATCTGAGTGGCCAGAGACGCAAAGCGTTCCG
TTGTCGTCCTGATCCCAGAACACCTCCACCATGACTCCTCTTGGATGCTCCTCCGTCTCA
GTTCCAGGGATGCCCACGAAACGAGCCCCCTTTGGTATCTGCATTCCCAACGTTCGTGAA
ATCAGGGAGATGTTCACAATGGCGTAAATAAAGACTAGAGGGATCTCCACATATGCAAAT
TATTGACGCTGGATGTCAGCTATCTGCATCTCAGAGAAGTTATCTTTCGTGTTCACAGGT
GCTGTTATGTTCTTAGGATTAGTGAGGGCAAACCTGAATTGTTGCTCCAGACGACAGGTT
TAGAGTCACCAGTGTCCCTTCGGCGGTGGAGCTCTCCAACTCGGCTTGCTTTGCAATGTT
CAGGAAGACTTCTTCAAGTGTTGTGAGACCAAGCTGAATGTCTGATATCCCGAATTCCCT
TTCTCTGTCTTGGAGTTCCCCGAAGAACCTCTGTTGGGAAAAAGTGCTATTGTGTCAAAA
TATTAGTTAATGATGTACACCATAATTTGGGTGTCAATGTATTACCGTCAGAAGTGGTTC
CTTCTCATGGGGGATGACAAACGTTAAGAATGTCCTGCTTTCCTCTTTCGGGTCCACATC
AAGCCTCTGTTTCAACAACATTTTTTGTGGTTTACATTTCCACATAATAAGAGGAACCCT
TCTGAATGGTACTTAGTTTAAGGATGAGACACATACTTCCTTGAAGAAGGATTTGACAGA
TTCTATGTTAGGATTAACCGGGGCCTCTGTATCACCGTTGATGTTAGGGCTCTGTGCGTG
ACCGTTTCCAGAGAAATTCACATTAGCGATATACCCAGTTCCGAATTTCGACTTCAGCCT
TATTGAAGTGCCGATACACCGCAATTTCCCCTTTGCCATGATAGCGATTCGGTCACTTAA
GATGTCAGCTTCCTCCATTGAATGGGTGGTCAAGACAATAGCTCTTCCCTTCTTTGCCTC
TTCGATGATGTCCCAGACATGCCTCCTTGTTATTGGATCCATGCCAGTTGTCTGTGTAGG
ATATACATGGTTAGATTAACATGCGACATTGTATGAGTAGCAAGTGAACTGATGAATATT
TGACAGGTCTCTACCGGCTCATCAAGAAAGACCAATTTTGGGTCACCAATTAGAGCAATC
GCAACACTCAACCGCCGTTTCATTCCACCACTATAGCTACCTGCTCTAACATTAGCTGCC
TGGCTGAGCTTCACTTGGGCTAGTGACTGCTCTGCTACCTGCATTGGACGAACAGAGAAA
GATCGATATGCCAAACCGTGTAGAGTGTTGGGGAGTATTTGCCGATAGGTTCTTAAGAAA
CATACCGACTTGATTGTTGATGGTGGCAAACCCTTGATGCTGGCAAACAATTCCATGTGC
TCCTTAGCCGTCAATGCGTCCCATAGGATGTCAAACTGCAAGGCAAACATGTTTTATCTT
CCATTAAAATTCAAAAGCACCTGCATGAGATATGTGAATGTTTAAAAAGACCAAACCTGC
GGACAGACTCCAATCATTCTGCGAATATTAGCCATACCCGCACTGCTTCGAACAGAATGA
CCATAAATCAATGCTGTCGAATGTTCAAAATAGCTTGTTAGCTAGCATATTCATAGTTAA
TAAGAATATATCACGAGCTATTGCTTCAGGGAATGACACTGACCATCGCCGCCGGTAATT
GGTGTGATTCCAGTCAGGCAGCTGATTGTAGTTGTTTTACCAGCTCCATTTGGCCCAAGA
AGACAAAACAGCTGATCCTTCTCAAGGTTCACCCATAAGCCCTGGTGAGATTTATTAGGT
GGTTAATATCATAGGAAGCAAAGCTTGCTTGCTTTTATGCTAGAAGATCACTGAGAACTC
ACTTTGACAGAATGGAATGGCTTAGTTGTTTTGCACTTGCAGCAACCCATATTAAAACTT
CCTGGATAGGTTTTCCGCAAGCCGCGGATCTGAACCGCAACACCAGGATCTACCTCATTT
CCTGCAGCTTGTTCTTTTACTAGATTTTCCTCAGTAAGAACATCCTCATCAGTAGGGCTA
GCATCATCAGCTGAATGGCTCGAACCAAAGCAGCTACAAAGGCCTCCCTCTGGAATGGAT
CAATCAGATTAATGAGTGACGTTACATAATACAGCTAAAAACATGGTGAAGAACTACTGC
ACACTTAAATAAACTCTGACCTCGCATCTTGCCTCCTTTCCCTGTCCAGTATGAAGGCGT
CAGAAAGTACAACACTGACTTTCTAACACCATTGACATTTGGAATTATGTTGTCGAAGTA
GATTGCCAGGATAAACCACAAGAAAAATGTGGAGATGAGCCATATGTAGATGTCATCCTG
TCAGATGTTGCAAACAATCAGGGCTTCAAGTTGCACAAGCACTAGAAGTACATAACTGCT
AATGACCAAAGTTTTGTACATACTACTGTAATGACGCAGTCCGTCTCAAATGATTGGCAC
GTTGTACGCTGATTCCAGCTAATGCCCTTGTCTTCTGGAGTTGCTGTTGCCTTACCTAGA
ATATTGAGGGCTTGTGCAAAAACATTAGGGGGGAAGAAGGACCATATTGTCCGGTAGTAT
GCCTCATAGGTATTTGAATATGGGAACCCAAAGGTTGTAACAAGCTGCACAAGCAAATAA
CCAAGGGGTTTGCTTATCTCATGACAACTTGAAATACTGTATCTGTATGATGATGATTAA
GCAAACTTTACCTGTGTCAAGAACCCAATGATGAATATTGCAAATCCAACAGTAGTAGCT
GATGCTGCTTTTGCCACAAATGTGGATATCATGAAAGCAAAACCAAGCTGCAGAAATTAT
CATGAACAAGACTGTTTAGGGAAACACGTTGTTTGCAGATTCTGATAGAGATTCAGAAAA
TGTATAAACAAAATTCATTCATGGAAGCATGCTATTTATCTAAATTTAACACTCCAAATA
GAGACAAGGAAAGCAAGCATACAGATCAGTATATATAGCTTACCATGTTCAGTTGGAAGA
GGAAGAATAGGAAGAATAAAATTCCGAAGCTATTGTTCAGGAAGAAGTCAAACTGAAACA
TCATCCCAAAGAGCACGGTGAAAAGTGCTGAAATTAATGTAAGCAAGGCCTCCCAGGTAA
GCCATGATAACCAATAAGCCGATTCGTAGAGCCCCATGATAGACATAGCCTGTGAATGGG
TACCAAACTTAATAGTCATGTCAAACATGAAAACACATAAATATCTAATCTCGACAAAAG
AAAAGAAAGATACACAGATCATAAAACAAAGATGCAGAGACGGAAATAGCTCGAACCTGA
CGAAGCTTCAGTTCTTTCTCTGTAACCAAGGCACTGATTTGGAAAACAAATCCAAACATT
GCAATAGCAAGGAAGAAAGTTGGCCCTGCTTGGGCAATAGTCGAGAAGGTTTCAGTTGCT
GGGTGAGCAAATTCCTTGAATCCCACAGTCCAGCTAAAATTTGGATCTGTCAGTCGTGAG
ATTCACTGTTATTCCCAAGTACTACTATATAATGGAAGCAAAACATATACAAGTAACACT
TATTTATGCAGAATACATTATCGACTGAAAGATAGAAGTAGATCAGAAGGAATGTAATCG
AAGGGTATGAAAACTGTGGTAGTACAAAGTAATTAGTATGCGTGAAACAATAGCATTCCC
TAAAATACCATGCAAGCAGCAATACCTCCAATAATCAGCCTTGCCATTTCCCTCTCAGCT
GCAACTTGAAGCGGTATCTGGAACTTGAAGGTGGGGTCCTCATATGTTCCTCTTCGAGCT
ACTGGAGTGGAGTTTGTCTGAATACCATACGACATCTGGGTGGGATTTATATCTTGAAAA
TGCAAAGCGCCAGGGCAGCGCATCGGGTTTTCAAATAGCCAAGCATCAACTTCATCCGGA
GTCCTAAAACCTAAGACCTGAGAAAGTCACCACAAGACAATTCAGGTAACATGCATTGTC
GCATATCGAGTAATAAACAATTCAAGGTGACCTGCAAAGTTGTTTTGAGTAACCCTGAAG
AAACTCAAGAACTTAACCAGTCCCCATGCTACATATTGCAGTTTACCAAAAAATCCGAGT
TTATTCAAGTGATAGTAAACTAGAAGTTCAAATTTATATTATCCTGAATACCATCCTTAA
TTTATTCCAGTTTGTGTGAAAAAAAATGAGAAGTTTCAGCAGCTGAATTCAAGTATACTA
TTTCAGACCACAGTACACAAGGAGAACAAGGCAGGAACTTCTATGCATTAGTTAATTTAA
CCTTTAGATTCAACTAACAAGAGGTCGTGTTGGCAATTAAAAAAAGTGCATATTGGTTTG
CAAACAAAAAAATAAAAATAAAACTTCTTTTAGAAAAACAAACCATGTAACACCGCTCCT
TTGGTATCATCGTTTCTTCTATGCACAGTTGCACACCACAAAACTCGTCGTAAATATTAT
CAAGCATATTTTCAGTTAGGTTCCAAACTTCCAATGTACATTCACACCGTCTTTGTTTCC
AAGAAAACGCATTGTGTACTCAGATAAGGAAATTAAACAGTAGCACGAAAATGACATGGA
AGTCATCTAGGACAAGCCAGAACTGAATTAGCTGTTCCAGGTAGACCCGTATGCATCCAA
ATCGGAACAAAATAGGCTCTTCTTTTCCCAACATTTTCTTAGGAAAACCCCAAACTCTGC
CATCCAAAGTGGGTGCCCACCGTTTTTCATTGGAGTATGCTAAGCCAAATGGAAGCAAAC
CACACAGCGACATTGTCAACATCAGACCTAAATGATGATCTAAGTTCAACGTCAGATCAG
CGAATCTGCTCAAAAAGGCTTGAAGGATGTAAAGGTAAAAATTGACGTAGCAAATCAAAA
CATATCTGTACCGAGCAGTAAAACAAGGTTTTTTTTTTTTTTGAACTGAGTAAAACAAGT
TTTCACCAAACAAGAAAGTTAAAATCCATATATCTGCACCGAGCAGTAATAAAAGGATGA
AAACCTTGAGAGCTGGGGCGAAATCACAATGCTGTACATGGGTCCAAACAACTCGGTCTG
GTCTGTGGTCTGAGCTGACCGTCACCGAGCGCTTGAAATCAAAATCATATCGCTTCCTCC
TCCAAATAATTCAGGCAGTTTTCTTTGTGTGACAAGAACGCACGGAGAATTTCGATCCTT
TCCTCACGTAAAAAGCCCCCAAATCGTCACAGTAATCGTGCGAGCAGCCAGCTCCGCGGC
ACGAAAACTGGCCAAACGCACGGCGCAAGAACAATTGCACGCAAAGTCAAACTGATGACT
AAAAAAGAAAAACAGAGGGAGGGGGGAGCAAACGGGAGGGATCAAATCTCTGACCTTTTC
GGCGGGGATCGGGCGGCCGGGGTTGTTCCTGCGGATGGCGTCGACGAGCGCCGGGACGCG
GGCGCTGGCGCCGCCGCTCCAGAGGAAGTCGTAGCAGGGGGTCTTGACGAAGAACTTGTC
CTCGCAGGGCGGGATGGGCGGCGCGACGAGCGCCTTGGGGTCGCGCACGTTCTGGTAGGC
GGTGGTGTAGGAGAAGCGGGAGCGGACGGCGCGGTCGATGCAGAAGATGAGGAAGATGAA
GATGAGGGACGAGAGCAGCTGCAGCGCCGACGAGCGCCGGTGGCGCCAGGCGAGCGCCGC
GTTCTTGCGGAGCAGGGAGCGGTACTGCCGCCACGCCAGCGCCGGGCCGCTCAGGAGCTC
CATCGGGCGGTGGACTGGAGGCGGAGGAGTCCCTTTGTCCTCCTGTCGCCGAGAGAATGG
CTTGGATATTTATTAGGGGGGGGAGGGCGCTTCAAAACGGCCGGAAAACTGCAGGAGAGA
CGCAGCGGCGCCGGACTGTCCGTGTTTCTCATTTTTTTTTTTAACACCGGCCACTGTATA
TACTTGTAAGTAGATTGGTATTTGAGACAATTTTGTTTATTTATTTAGGGTATAAACCAT
TTGTTAAGGTGGCGGGCACAGTTGGGATTTCTATGGCATCCAAGGATAGTATCTTCGATA
ATAAATACTCCCTCCATTTTTTTCCAGAATAATAAGTTCAACGATTTCTGTTTGTGGTTG
ATGGTCTCTCTATTCTGTTCAACAAGGATACAAATTCAACTAATTTGTCCCCGTTGAAGA
TAACTCGACGAGCTCCTGGAATATCACATCTCCTATTCGCATATGACACTCTTTTATTCT
TTAAGGCTACTCGGCAACAGGCGAATACTGTCAAGCAAATTCTCAAGACTTATGAGCAAG
CCACTGGTCAATTATTGAATTTGGTAAAGTCCTCTATTCTTGTTGGAGAATCTTGTCCGG
AGGCTACTGTAGCTGAATCAAGGGCGTTTTGGGGGTGATCAGTTCTTGATTTGAGGAGAA
GTACTTGGGCTTACCCACTCCGGATGGCCCGCTTACTAAGGGCAAGCTTCGAAATCTGCA
ATAAAAGGTTACTAAGAGATTGTTTGCTTTTGATGGGCACCCAACACAGGCTGGGAAGGA
AACTGTGATAAAGTCTCTAGCCCAAGCGACCCCTACCTTCATTATGAGTGTGTTCAAGAT
CTTGCTGGGAGTGTGTGATGATTTGAACCGCATGATCCGGAATTATTTTTGGGGCTCGGA
GAAAAGGAAGCGAAAAACTCATTGGTTTGCTTGGGAGAAACTTTTGCGAGCAAAAGCACA
AGGAGGGCTTGGGTTTAGGGACTTTAGAATTTTCAACCAAGCGTTGCTTGCAAGGCAAAC
TTGGCGTCTGCTAATTCATCCTGACAGTCTTTGTACAAGGTTACTTAAGGCTAAATATTA
TCCAAACGGACGGTTCGAGGACACGGTATTTTCAAGTAACCCCTCTCAGTC