Contig Data
morexGenes
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Map Locations of contig_66206 (5351 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_66206

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74618 1 2525 bp MLOC_74618.1 Available Available LOC_Os05g33320.1, FRAME:-2, EVALUE:2e-42, 13105.m03443 protein expressed protein





CDS Structure of MLOC_74618






Contig Sequence (5351 bp)

>contig_66206 5351 assembly3_WGSMorex_rbca.fasta
AGGAACGGAGGAGTACATGTGTGCCCCCCCCCCCCCCAAGGGATTTCTTGAACGAGTTAT
TATGCGTTGCATTTGGAATTGCTATTTGTTACTTCTTCTTTTTTAAATATAAGTCTTTTT
AAAAATTTCACTACAGATTACATACAAAGCAAAATAAATGAATTTACATTTTAAAGTATG
TTTATATACATTCGTATGTAGTTTGTAGGGTAATTTTTATTTTTTTAAAAACTTATATTT
AGGAACGGAAGGAGTGGTAACAAGATAAATTTGGTAATAAAAAAGTGAAAATCGTTCATG
GTATATGGTATTTATGCTCTTTGCAATCACTTGCGTCGCTCTCAAAGTGAGAGCGGACTA
ACCCGATGTGCACATTTAAAAAAAATATATACCATGTTGTACCATGATAATTCAGAGTAT
TTTATTAAAGATAAAAAAAATTGCTCCAGAAAAATGTCAACTCTTACGTGTCCAAATTTG
TAGCGCCGCGACAAATACCGCTCTCGTCAGTCAATACGAGAACAGAGATGACAAATCAAA
GTTCATGAAGTTCACCCATTCCAGAATACTTTCACATATAATTGTCGTTTCAGACCCTTC
TTTTTTGACCCGGTGACCAAGCGTGGTCATTCATCACCGTCACCCCCAGCCCGAAGATGA
AGATGGAAGACCTCAATTCGAGCCGCGGAGCACTTGAAAAACACAGCCCGGAAGCAGAAG
AGTTCAAACTCGGTGTCATCGCCAATTAATCACCCCATTCAAAAGGGCGAAGGACGCAAA
GGTTTTGTCGAGACCGCCGTTTGCCAAATCTGATGACACCCAAGGCACATGCTACCCAGA
TTCACCTGAAATATTTTATGCCGCCCGCCCTCCGCGACGGCGAGGCTACAGCCTAGCATT
GCTGGAGTATATGCCCCCAAAATGGAGCCCGCCCCCATGGCAGCCTGTTGGCGCTCCACA
GCAGACTGCAACGCACAACGGTGCCCACGAGGTGGAGTGGAACCGCCGCGAGCTGGCCGG
CCGGACAAGGCGTCAGAGTCCCCGCCACGGCGCGGCACGTTTTGCACCCCCGACGGGTGA
TAGGAGTACATTAATTTGGCAAAAAAGCAGCCACACCAAAAGTAAACACATGAGCTAATT
AGGTTACTGGTGGCGGGTAGCGGCCGTACTGTCCAGTACTGCTCTCCCAGGCCCAAAAGG
GTGGCCGAGCGAGGAGGGCGCGTGCAGTGCGGGCGAACCGAAAATAAAGTTGGCGCACGG
AAAGAGAGGGCGGACGGCGTCGGGGGAAAAGCCGTAGGGTTTTCTACTCCCAGCGACCTC
GTGATGCCGTTTCACGGGGAGTGCGCCGCCGCCGGCACCTGTGGCCAGGATTGACCGGCC
GAGGCTGTCTCCGCCGTCCGATCCACGCGACCTGGACTAATAACTCTTCCTTTGGTGGCC
CTGCACGGAAAAATTATTGGCTCTCTCGCTCCAGTTTTTCCCCCTAACCACCGGGCTTGA
TGGGCCCGGTACGCCGGTTCGACGAACCAACACGTAAATAATTAACGATACCATAAAGAT
GGAGTCATTTCGAAGCCTAATTCGGACCCCTTTTTTGGTTATTATTTGGCCCCGATAAAA
CAGGAGATGTTTAAGTGGGCAAAAGCTTGCGGAAGAAACCACGGGCAAAACAAACGTAAC
GACCAGATCCAACCGTCTGCGTGGCGGGGCCAAAACGGGAGATCGGTTCCACAGACGGAT
TGAAACTAACGGAAGGATTCGAATGCGGCCGGAAAGGGAAAAAATTTGAGGTGCTACGCG
CACACGAGGATTTTATAATAATTTATAGAGAGATGGTTGTACTTACGTCCGTCGTGGACA
GCGTCGTCTTCCGTGGAGGCCGCCTTCCGCTCCGACGAATCTCCCGAGGAATCTTCGCCG
TCCGCCTCCTGCTCGCGGCCCGCGTCGACGGGGTGGACGGCGACGTCGGGCTGCGCCTCC
GGTATAGGCTCGGGCTCCGCGGCGACGGTGACGACGAGCTCGTCCATGGGCTCGTGGATC
ACCGTGGACGCGGCCTCCTCCTCGGAGTAGGCGGCGGCGGCGCGGGCGTCGGAGACGCGA
CGCAGCTCGGCGGCGACGTCGGCGACGGAGTAGAACTTCTGCATGTGGAGGACGGGGAAC
CAGTTGAGGCGGCGGCGGTGGAGCGCGGCGAAGACGGCGTCGTAGTCGGCCCCGCCGATC
TGCGCGAGGTGGCCGCACAGCGCATCGATCACGGCGTTGGCGGCCGCGAACTCGCCGCGG
TACCACCCGATCACGGCGTCCCTGGCCGCCACCTGATCCGGCGCCGCCACCGGTGACCCC
GGGGCCCCCGCCGCCGGTGTCGTCATCCCTCCCGCGATCGCCAGGCTACCCGCTCCCCTC
CCACTAGCCACTGGCTGTCCCTCCTCCTCCTCCCCGAATTTCCCTCCCCGGACGTGTGCG
TGCCGCTCTCTCCGCCCAAGCTTTTTGTAATGGCGTCAAGGTGTTCGACGCCCGGCCTGT
TCTAAATCGGCTTGGTATTGTGGGGAGCGCTTCTCTCTCGGGGGCGCGCCTATAAATACC
CCCGGAGAAGAAGCGGCCGAGGGTACCCGTAGCCAACAGCGCCCAGGGGCGGGGTGACGT
GGCGCCGATTAGCGGGTACGGGCGCAGATCCGACAAGGTGGTGGCAGCAGTTAGTTTTTT
TTGGTCAGCCTCGCTTTGGTTGTAGGTGGCTCGACTCCACCCGGCCTACGGGGGCGCGTG
TGGACCGCGCGCGCGCTGCACACAGAGAATGGGCTGCGCGGTTCGGCGCACTGGGACGTC
ACTCACCGTGGCGGATGGCCTCGGGATGCACTGTCGCGACGGCGTGAGCCAGGTCCTTGG
GCCCGTCCTTGGACCGGGATACCGGGTGGCCATGCGTGGGAGCCTGGTTGGATCACGCAC
CATCCCAGCCGTCCATCTCAGGACCCCGCACCCTCGTTCGGTTTTTTGTTCTTGTTTGTG
CAAGATATGATTGGGGACAGGCGAATAGGGAAGTTCTTTTTTTACTGTCTATTGGGTGTG
ACCGCGCATGGATAGGCTGTAGAGCCCTGTTTTGGGAAGTAGGTAATTCAATCAATGAAT
TATCCAGCTATTCGCATGCTTACACATTTGTAAAATTCACACGTTTTGACTTTTGAAGAT
GGGATATGCACAATGCACTAGACGTCCACAATGGTTTGACCTCAGCCTTCTCTTAGAGTT
TTGTGTATGAGTCTCATGGAGATTTGTCTCTTTGTTATTAAAATAGGTGGCCTCTCAACT
GATGAGAGCATTTACGGACGAACGTAGCAAATATGACTTCCTCAACATCCGCGGACACGT
CCGGTCAGTGACCGGATGTGCCCCTATTTGTCCATCTGCGCATTCATAATTCTTATTTTC
TTTCTCATATGTCCGATCACTTGCACATGATTGATGAAGAGAAAGAGAGAGAAAAAAAAA
GATGGTCTAGGATGGGGTCGCGTCCTACGTGGCGGACTGACTGGGCACGCTCGGGCACGT
CTGCGAGTCCTCATATCCTTCCTATATTTTTCCTCCATATGAGGGTTTCCGGACAGCCCG
GGCGTATAGGGATGATATCAGGGATTCGATTGAGCCTTTTTTTTTCATTCTCTCTCCTGA
GCGGGCGTGTCCACGGGTGTATCATAGGTCCTACATTGTGCGACATATCTTATTTTCATT
GTGCAGATGTATCTTCTTTTCATGATGTATTTTTTGTAAAAGAGGGGGGGGGGGGGTTGT
TCAAGAGCATTATAGCGACGATCATAATTATACACAACATTCTTAATATCAACAAGCTTC
AATGTAACCAACATCCTTAATACCCTCGATAATCATGAACGTAGGTTGCGACCTACTCCT
AAAGATTATGGGATTTCTTTCCATCCAGATACAGTGAAGCGCATGTAAGGCTAGTCATAG
TGGAGGTATCTTAGCTGGTAACATACACTCGGGAATATCAAACATGCTGATGTGGCATAG
AATTAAAGATGAAAGAGAGGGTTAGAGTAACATACGTAGATATCATATCATGTTAAATGT
TATGCTACTTTGTGTCATGCATGACAATAAATAAAGGCATATATGATACTACTCGATGTA
ACTATGCACTATGAAGGTAATATCATACACTTGTATCATATGCATGATACTAATATATGA
TAGTCTCCATTATGAGTAGCCTAAGGCCATAGAGAACCTTCCCCTCGTGCAAGCTTCACA
CGAGACGCTAGCCTTGGTCCACCAAACAAAGATGGAACACTTGCCTCGATGTGCAAGTTA
TTGCACTCCTATTCTCCAGAGAACCTAGGCCCCCATAGCTCATGGGCGTAGGTGAGAGGG
AGTGGCGAGCATATGGCCAATCAAGTCATCGACGTGGCGATAAGAGCAAGGATAATGACT
GGGTGGTAAATTGTGCATCGCCAAATGACCATAATGGTTCAACACTGTGGGTCATGCATA
CATCTTAAACTTCAACGACGCCCTTGGTTTCCGCACAAGATCTTCCTAGCCATAGTTGGC
CGACCCCACAAAAATCATGCGAAATGCTAGTGAGCAAAATGTTTCCATATCTGATTTTAT
TCGTCACATAATTATGCACATTAATTCTAAAAGATTTCTCATCACATTCGATGTCAATGC
CCTTCGTCGTCGCGAGGGAAGCTTGTGGCTTGTGCTTTTAAGGTTGTGCGAGTTTTCTCC
ATTGAGATAGAACCAAACATGCATATGGCGATAGAGTTGAACCCTTTCCTAAGGCGATCA
CCAAGCGTGGAGCTAGCTTTGCTCCACCCTAGGAAGATGGAATCATTTGGCTAGGGCGAG
GCAAGCTACTACACTTCCATTGAAACTAGACGACGCCTCCAAGGTATCCATGTGTACTGA
TCCAACGGGATTGTAGCACTCTGTGGAACCAACACAAAAAATGCAAGGGGAAACCAAAGG
GTGTCGAGGTCAAAACTGGCAGATCTCGGATAGGGGGTCCCGAATTGTGGATTTTGGATC
GATGGGTAATAGGAGATAGGGGAGACAATGTTTGCCCAGGTTTGGGCCCTCTTAATGGAG
GTAAAACCCTACGTCCTGCTCTTGTTTATATTTATGATGGAGTATCGAGTACAGAGACGA
TCTACCTCGAGATCGTATTACGTGGTCTAAACCCTAGGAGTATTGATCTTAACCTCTTGT
ATGATAATTACCTATCGACTACTCATATCAATAAGGAATNNCTTCTTTTCCAGGAGCCCA
TTCGAACAAACTTCCAAGTTAAGCGTGCTCGGCTTGGANNNNNTCTAGGATGGGTGACCG
GCCGGGAAGTT